RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 KRTAP10-6P60371 365 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-215ENST00000520804 Q6ZQY7 126 aa10.4□□□□□ -0.74
PABPC1-215ENST00000520804 hADV29S1A0JD25 119 aa10.39□□□□□ -0.75
PABPC1-215ENST00000520804 Q6JHZ5 121 aa10.38□□□□□ -0.75
PABPC1-215ENST00000520804 M0R2T5 61 aa10.37□□□□□ -0.75
PABPC1-215ENST00000520804 COX6B2Q6YFQ2 88 aa10.37□□□□□ -0.75
PABPC1-215ENST00000520804 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
PABPC1-215ENST00000520804 TRBV7-7A0A0K0K1E9 115 aa10.36□□□□□ -0.75
PABPC1-215ENST00000520804 IGFL1Q6UW32 110 aa10.36□□□□□ -0.75
PABPC1-215ENST00000520804 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
PABPC1-215ENST00000520804 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
PABPC1-215ENST00000520804 OCIAD2Q56VL3 154 aa10.34□□□□□ -0.75
PABPC1-215ENST00000520804 HIST3H2BBQ8N257 126 aa10.33□□□□□ -0.76
PABPC1-215ENST00000520804 HIST1H2BLQ99880 126 aa10.33□□□□□ -0.76
PABPC1-215ENST00000520804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-215ENST00000520804 S100A2P29034 98 aa10.3□□□□□ -0.76
PABPC1-215ENST00000520804 PPDPFLQ8WWR9 84 aa10.29□□□□□ -0.76
PABPC1-215ENST00000520804 BVES-AS1Q5T3Y7 98 aa10.28□□□□□ -0.76
PABPC1-215ENST00000520804 OBSCN-AS1Q96MR7 158 aa10.28□□□□□ -0.76
PABPC1-215ENST00000520804 Q75L30 129 aa10.27□□□□□ -0.77
PABPC1-215ENST00000520804 C12orf57Q99622 126 aa10.27□□□□□ -0.77
PABPC1-215ENST00000520804 ATP11AUNQ6ZP68 121 aa10.26□□□□□ -0.77
PABPC1-215ENST00000520804 SNHG12Q9BXW3 62 aa10.26□□□□□ -0.77
PABPC1-215ENST00000520804 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
PABPC1-215ENST00000520804 H3BUT2 72 aa10.23□□□□□ -0.77
PABPC1-215ENST00000520804 LST1O00453 97 aa10.23□□□□□ -0.77
PABPC1-215ENST00000520804 SCGB1D1O95968 90 aa10.23□□□□□ -0.77
PABPC1-215ENST00000520804 COX8AP10176 69 aa10.19□□□□□ -0.78
PABPC1-215ENST00000520804 Q6Q795 121 aa10.19□□□□□ -0.78
PABPC1-215ENST00000520804 Q96NJ1 140 aa10.18□□□□□ -0.78
PABPC1-215ENST00000520804 S100A6P06703 90 aa10.17□□□□□ -0.78
PABPC1-215ENST00000520804 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
PABPC1-215ENST00000520804 DLEU1O43261 78 aa10.15□□□□□ -0.78
PABPC1-215ENST00000520804 CFC1P0CG37 223 aa10.15□□□□□ -0.78
PABPC1-215ENST00000520804 SNCGO76070 127 aa10.13□□□□□ -0.79
PABPC1-215ENST00000520804 TEN1Q86WV5 123 aa10.13□□□□□ -0.79
PABPC1-215ENST00000520804 RAB37Q96AX2 223 aa10.13□□□□□ -0.79
PABPC1-215ENST00000520804 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
PABPC1-215ENST00000520804 H0YGX0 51 aa10.12□□□□□ -0.79
PABPC1-215ENST00000520804 NDUFV3P56181 108 aaKnown RBP10.12□□□□□ -0.79
PABPC1-215ENST00000520804 FAM218AQ96MZ4 157 aa10.11□□□□□ -0.79
PABPC1-215ENST00000520804 A8MUU9 505 aa10.1□□□□□ -0.79
PABPC1-215ENST00000520804 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
PABPC1-215ENST00000520804 A0A087WSZ3 146 aa10.08□□□□□ -0.8
PABPC1-215ENST00000520804 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
PABPC1-215ENST00000520804 C14orf144Q96I85 54 aa10.07□□□□□ -0.8
PABPC1-215ENST00000520804 H3BMG7 143 aa10.05□□□□□ -0.8
PABPC1-215ENST00000520804 S100A1P23297 94 aa10.04□□□□□ -0.8
PABPC1-215ENST00000520804 A0A1B0GX51 115 aa10.03□□□□□ -0.8
PABPC1-215ENST00000520804 GHRHP01286 108 aa10.03□□□□□ -0.8
PABPC1-215ENST00000520804 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.81
PABPC1-215ENST00000520804 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.81
PABPC1-215ENST00000520804 TRBV20-1A0A075B6N2 111 aa10.01□□□□□ -0.81
PABPC1-215ENST00000520804 FABP2P12104 132 aa10.01□□□□□ -0.81
PABPC1-215ENST00000520804 DSCR10P59022 87 aa10.01□□□□□ -0.81
PABPC1-215ENST00000520804 SPATA45Q537H7 98 aa10.01□□□□□ -0.81
PABPC1-215ENST00000520804 A0A1W2PNM2 257 aa9.99□□□□□ -0.81
PABPC1-215ENST00000520804 CEND1Q8N111 149 aa9.99□□□□□ -0.81
PABPC1-215ENST00000520804 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
PABPC1-215ENST00000520804 PRO1854Q9UHT4 67 aa9.99□□□□□ -0.81
PABPC1-215ENST00000520804 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
PABPC1-215ENST00000520804 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
PABPC1-215ENST00000520804 A6NJY4 79 aa9.95□□□□□ -0.82
PABPC1-215ENST00000520804 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
PABPC1-215ENST00000520804 TRIAP1O43715 76 aa9.94□□□□□ -0.82
PABPC1-215ENST00000520804 LINC00313P59037 77 aa9.93□□□□□ -0.82
PABPC1-215ENST00000520804 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
PABPC1-215ENST00000520804 FXYD2P54710 66 aa9.92□□□□□ -0.82
PABPC1-215ENST00000520804 TRBV7-4A0A0J9YYF1 115 aa9.91□□□□□ -0.82
PABPC1-215ENST00000520804 IGKV4-1P06312 121 aa9.91□□□□□ -0.82
PABPC1-215ENST00000520804 ANKRD29Q8N6D5 301 aa9.91□□□□□ -0.82
PABPC1-215ENST00000520804 USH2AO75445 5202 aa9.9□□□□□ -0.83
PABPC1-215ENST00000520804 DNAL4O96015 105 aa9.88□□□□□ -0.83
PABPC1-215ENST00000520804 ORMDL1Q9P0S3 153 aa9.88□□□□□ -0.83
PABPC1-215ENST00000520804 H3BQ85 93 aa9.87□□□□□ -0.83
PABPC1-215ENST00000520804 SSPOA2VEC9 5147 aa9.87□□□□□ -0.83
PABPC1-215ENST00000520804 A0A1B0GV72 72 aa9.86□□□□□ -0.83
PABPC1-215ENST00000520804 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
PABPC1-215ENST00000520804 FAM236DA0A1B0GTK5 79 aa9.85□□□□□ -0.83
PABPC1-215ENST00000520804 FAM236CP0DP71 79 aa9.85□□□□□ -0.83
PABPC1-215ENST00000520804 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
PABPC1-215ENST00000520804 DEFB116Q30KQ4 102 aa9.84□□□□□ -0.83
PABPC1-215ENST00000520804 TMEM256-PLSCR3K7ERE1 68 aa9.83□□□□□ -0.84
PABPC1-215ENST00000520804 MT2AP02795 61 aa9.82□□□□□ -0.84
PABPC1-215ENST00000520804 HRES1P13985 223 aa9.82□□□□□ -0.84
PABPC1-215ENST00000520804 PSMB2P49721 201 aa9.82□□□□□ -0.84
PABPC1-215ENST00000520804 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
PABPC1-215ENST00000520804 CCKP06307 115 aa9.81□□□□□ -0.84
PABPC1-215ENST00000520804 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
PABPC1-215ENST00000520804 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
PABPC1-215ENST00000520804 K7ERJ3 54 aa9.8□□□□□ -0.84
PABPC1-215ENST00000520804 TRACP01848 142 aa9.8□□□□□ -0.84
PABPC1-215ENST00000520804 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
PABPC1-215ENST00000520804 COX6CP09669 75 aa9.79□□□□□ -0.84
PABPC1-215ENST00000520804 HSD52Q0P140 79 aa9.79□□□□□ -0.84
PABPC1-215ENST00000520804 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
PABPC1-215ENST00000520804 KRTAP9-7A8MTY7 169 aa9.74□□□□□ -0.85
PABPC1-215ENST00000520804 MT1FP04733 61 aa9.74□□□□□ -0.85
PABPC1-215ENST00000520804 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
PABPC1-215ENST00000520804 A0A1B0GVX0 72 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms