RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 PLIN4Q96Q06 1357 aa-0.35□□□□□ -2.47
SKP1-207ENST00000520417 MTORP42345 2549 aa-0.35□□□□□ -2.47
SKP1-207ENST00000520417 UTP20O75691 2785 aaKnown RBP-0.35□□□□□ -2.47
SKP1-207ENST00000520417 KIAA1551Q9HCM1 1747 aa-0.35□□□□□ -2.47
SKP1-207ENST00000520417 CSMD1Q96PZ7 3565 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 DMXL2Q8TDJ6 3036 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 CUBNO60494 3623 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 RGPD2P0DJD1 1756 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 SRCAPQ6ZRS2 3230 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 PVALEFA0A1B0GWK0 134 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 NDUFB1O75438 58 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 PRO3102Q9H379 93 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 DNAH3Q8TD57 4116 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 CCNB3Q8WWL7 1395 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 FANCAO15360 1455 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 DNAH2Q9P225 4427 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 A0A0C4DFX4 3053 aa-0.36□□□□□ -2.47
SKP1-207ENST00000520417 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.37□□□□□ -2.47
SKP1-207ENST00000520417 LRRC7Q96NW7 1537 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 K7EP34 96 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 ACYP1P07311 99 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 C3orf79P0CE67 100 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 RABAC1Q9UI14 185 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 LRRC9Q6ZRR7 1453 aa-0.37□□□□□ -2.47
SKP1-207ENST00000520417 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.37□□□□□ -2.47
SKP1-207ENST00000520417 PKD1L3Q7Z443 1732 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 H3BNG1 76 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 LINC00158P58513 81 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 ATP7BP35670 1465 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 ZFHX4Q86UP3 3567 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 NBEAQ8NFP9 2946 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 DNAH6Q9C0G6 4158 aa-0.38□□□□□ -2.47
SKP1-207ENST00000520417 EP400Q96L91 3159 aa-0.39□□□□□ -2.47
SKP1-207ENST00000520417 KANTRA0A1W2PQU2 76 aa-0.39□□□□□ -2.47
SKP1-207ENST00000520417 IFI27P40305 119 aaPredicted RBP-0.39□□□□□ -2.47
SKP1-207ENST00000520417 AKAP12Q02952 1782 aa-0.4□□□□□ -2.47
SKP1-207ENST00000520417 DNAH8Q96JB1 4490 aa-0.4□□□□□ -2.47
SKP1-207ENST00000520417 CSMD2Q7Z408 3487 aa-0.4□□□□□ -2.47
SKP1-207ENST00000520417 UMAD1C9J7I0 102 aa-0.4□□□□□ -2.47
SKP1-207ENST00000520417 CICQ96RK0 1608 aaPredicted RBP-0.4□□□□□ -2.47
SKP1-207ENST00000520417 ANK3Q12955 4377 aaKnown RBP-0.4□□□□□ -2.47
SKP1-207ENST00000520417 PKHD1L1Q86WI1 4243 aa-0.4□□□□□ -2.47
SKP1-207ENST00000520417 SPEGQ15772 3267 aa-0.41□□□□□ -2.47
SKP1-207ENST00000520417 RGPD8O14715 1765 aaPredicted RBP-0.41□□□□□ -2.47
SKP1-207ENST00000520417 RGPD5Q99666 1765 aa-0.41□□□□□ -2.47
SKP1-207ENST00000520417 DEFA5Q01523 94 aa-0.41□□□□□ -2.48
SKP1-207ENST00000520417 SPRR2FQ96RM1 72 aa-0.41□□□□□ -2.48
SKP1-207ENST00000520417 DNAH11Q96DT5 4516 aa-0.41□□□□□ -2.48
SKP1-207ENST00000520417 RGPD4Q7Z3J3 1758 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 TDRG1Q3Y452 100 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 CHD7Q9P2D1 2997 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 TROQ12816 1431 aaPredicted RBP-0.42□□□□□ -2.48
SKP1-207ENST00000520417 ANKRD26Q9UPS8 1709 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 LOC400499M0QZD8 3231 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 PTPN23Q9H3S7 1636 aa-0.42□□□□□ -2.48
SKP1-207ENST00000520417 EYSQ5T1H1 3165 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 DNAH9Q9NYC9 4486 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 RGPD1P0DJD0 1748 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 QSER1Q2KHR3 1735 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 ADAMTS12P58397 1594 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 CEP162Q5TB80 1403 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 A0A087WXM4 84 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 IFI6P09912 130 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 RGPD3A6NKT7 1758 aaPredicted RBP-0.43□□□□□ -2.48
SKP1-207ENST00000520417 PREX1Q8TCU6 1659 aa-0.43□□□□□ -2.48
SKP1-207ENST00000520417 CEP290O15078 2479 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 C9orf92A6NGG3 77 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 ADIRFQ15847 76 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 NCOA2Q15596 1464 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 MGAQ8IWI9 3026 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 VPS13DQ5THJ4 4388 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 LRBAP50851 2863 aa-0.44□□□□□ -2.48
SKP1-207ENST00000520417 MYO3AQ8NEV4 1616 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 DNAH17Q9UFH2 4485 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 GNG2P59768 71 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 S100A13Q99584 98 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 TRIOO75962 3097 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 BOD1L1Q8NFC6 3051 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 SZT2Q5T011 3432 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 ALKQ9UM73 1620 aa-0.46□□□□□ -2.48
SKP1-207ENST00000520417 TRRAPQ9Y4A5 3859 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 MUC3AQ02505 3323 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 URB2Q14146 1524 aaKnown RBP-0.47□□□□□ -2.48
SKP1-207ENST00000520417 CMYA5Q8N3K9 4069 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 FREM2Q5SZK8 3169 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 NDUFA4O00483 81 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 ST20Q9HBF5 79 aa-0.47□□□□□ -2.48
SKP1-207ENST00000520417 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.47□□□□□ -2.48
SKP1-207ENST00000520417 CENPEQ02224 2701 aa-0.47□□□□□ -2.49
SKP1-207ENST00000520417 UBR1Q8IWV7 1749 aa-0.47□□□□□ -2.49
SKP1-207ENST00000520417 ADGRG4Q8IZF6 3080 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 MT1AP04731 61 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 SMIM13P0DJ93 91 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 NREPQ16612 68 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 CRYBG3Q68DQ2 2970 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 C4AP0C0L4 1744 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 C4BP0C0L5 1744 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 SUPT6HQ7KZ85 1726 aaKnown RBP-0.48□□□□□ -2.49
SKP1-207ENST00000520417 LTN1O94822 1766 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 ACACAQ13085 2346 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms