RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 MUC3AQ02505 3323 aa5.35□□□□□ -1.55
PCM1-212ENST00000519253 HECTD1Q9ULT8 2610 aa5.35□□□□□ -1.55
PCM1-212ENST00000519253 TEX15Q9BXT5 2789 aa5.35□□□□□ -1.55
PCM1-212ENST00000519253 LINC01558Q9Y6Z2 57 aa5.35□□□□□ -1.55
PCM1-212ENST00000519253 MDFIQ99750 246 aa5.34□□□□□ -1.55
PCM1-212ENST00000519253 SPRR1BP22528 89 aa5.34□□□□□ -1.55
PCM1-212ENST00000519253 FLNCQ14315 2725 aa5.34□□□□□ -1.55
PCM1-212ENST00000519253 NBDYA0A0U1RRE5 68 aa5.34□□□□□ -1.56
PCM1-212ENST00000519253 IGLV5-52A0A0A0MRZ9 124 aa5.33□□□□□ -1.56
PCM1-212ENST00000519253 MMP24-AS1A0A0U1RRL7 71 aa5.33□□□□□ -1.56
PCM1-212ENST00000519253 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
PCM1-212ENST00000519253 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
PCM1-212ENST00000519253 UQCR11O14957 56 aa5.33□□□□□ -1.56
PCM1-212ENST00000519253 CFAP46Q8IYW2 2715 aa5.32□□□□□ -1.56
PCM1-212ENST00000519253 KRTAP24-1Q3LI83 254 aa5.32□□□□□ -1.56
PCM1-212ENST00000519253 LINC00313P59037 77 aa5.32□□□□□ -1.56
PCM1-212ENST00000519253 RBM12B-AS1Q9P1G2 102 aa5.32□□□□□ -1.56
PCM1-212ENST00000519253 HRNRQ86YZ3 2850 aaPredicted RBP5.31□□□□□ -1.56
PCM1-212ENST00000519253 ITPR1Q14643 2758 aa5.31□□□□□ -1.56
PCM1-212ENST00000519253 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
PCM1-212ENST00000519253 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
PCM1-212ENST00000519253 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
PCM1-212ENST00000519253 USP24Q9UPU5 2620 aa5.31□□□□□ -1.56
PCM1-212ENST00000519253 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
PCM1-212ENST00000519253 SPINK1P00995 79 aa5.29□□□□□ -1.56
PCM1-212ENST00000519253 WDFY3Q8IZQ1 3526 aa5.29□□□□□ -1.56
PCM1-212ENST00000519253 SETXQ7Z333 2677 aaKnown RBP5.29□□□□□ -1.56
PCM1-212ENST00000519253 DCHS1Q96JQ0 3298 aa5.28□□□□□ -1.56
PCM1-212ENST00000519253 ZNF861PO60384 105 aa5.28□□□□□ -1.56
PCM1-212ENST00000519253 SSBP3-AS1Q7Z2R9 100 aa5.28□□□□□ -1.56
PCM1-212ENST00000519253 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
PCM1-212ENST00000519253 PRR26Q8N8Z3 221 aa5.28□□□□□ -1.56
PCM1-212ENST00000519253 RTL8CO15255 209 aa5.27□□□□□ -1.57
PCM1-212ENST00000519253 ASH1LQ9NR48 2969 aaKnown RBP5.27□□□□□ -1.57
PCM1-212ENST00000519253 COL12A1Q99715 3063 aa5.27□□□□□ -1.57
PCM1-212ENST00000519253 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
PCM1-212ENST00000519253 FLNBO75369 2602 aaKnown RBP5.26□□□□□ -1.57
PCM1-212ENST00000519253 DMXL1Q9Y485 3027 aa5.25□□□□□ -1.57
PCM1-212ENST00000519253 HRES1P13985 223 aa5.25□□□□□ -1.57
PCM1-212ENST00000519253 K7EIL1 84 aa5.25□□□□□ -1.57
PCM1-212ENST00000519253 MGAM2Q2M2H8 2515 aa5.23□□□□□ -1.57
PCM1-212ENST00000519253 ZANQ9Y493 2812 aa5.23□□□□□ -1.57
PCM1-212ENST00000519253 LY6G6CO95867 125 aa5.22□□□□□ -1.57
PCM1-212ENST00000519253 PSORS1C2Q9UIG4 136 aa5.22□□□□□ -1.57
PCM1-212ENST00000519253 MAST4O15021 2626 aa5.22□□□□□ -1.57
PCM1-212ENST00000519253 HELZ2Q9BYK8 2649 aaKnown RBP5.22□□□□□ -1.57
PCM1-212ENST00000519253 SPACA4Q8TDM5 124 aa5.22□□□□□ -1.57
PCM1-212ENST00000519253 APLNQ9ULZ1 77 aa5.22□□□□□ -1.57
PCM1-212ENST00000519253 Q6ZR54 194 aa5.21□□□□□ -1.58
PCM1-212ENST00000519253 ASPMQ8IZT6 3477 aa5.21□□□□□ -1.58
PCM1-212ENST00000519253 SPINK7P58062 85 aa5.21□□□□□ -1.58
PCM1-212ENST00000519253 UBR5O95071 2799 aaPredicted RBP5.2□□□□□ -1.58
PCM1-212ENST00000519253 A0A087WTM6 91 aa5.2□□□□□ -1.58
PCM1-212ENST00000519253 ANAPC11Q9NYG5 84 aa5.2□□□□□ -1.58
PCM1-212ENST00000519253 UTP20O75691 2785 aaKnown RBP5.19□□□□□ -1.58
PCM1-212ENST00000519253 TEP1Q99973 2627 aaKnown RBP5.19□□□□□ -1.58
PCM1-212ENST00000519253 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
PCM1-212ENST00000519253 IGLV7-43P04211 117 aa5.18□□□□□ -1.58
PCM1-212ENST00000519253 NOTCH1P46531 2555 aa5.17□□□□□ -1.58
PCM1-212ENST00000519253 LINC01554Q52M75 96 aa5.16□□□□□ -1.58
PCM1-212ENST00000519253 A6NN06 94 aa5.15□□□□□ -1.58
PCM1-212ENST00000519253 Q96NJ1 140 aa5.15□□□□□ -1.59
PCM1-212ENST00000519253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.15□□□□□ -1.59
PCM1-212ENST00000519253 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
PCM1-212ENST00000519253 WWC2-AS2Q96NR7 200 aa5.13□□□□□ -1.59
PCM1-212ENST00000519253 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
PCM1-212ENST00000519253 BAHCC1Q9P281 2608 aa5.13□□□□□ -1.59
PCM1-212ENST00000519253 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
PCM1-212ENST00000519253 TYMSOSQ8TAI1 123 aa5.12□□□□□ -1.59
PCM1-212ENST00000519253 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
PCM1-212ENST00000519253 DMAC1Q96GE9 116 aa5.12□□□□□ -1.59
PCM1-212ENST00000519253 NBEAL1Q6ZS30 2694 aa5.11□□□□□ -1.59
PCM1-212ENST00000519253 A8MU10 97 aa5.11□□□□□ -1.59
PCM1-212ENST00000519253 NIPBLQ6KC79 2804 aaeCLIP5.11□□□□□ -1.591e-6■■■□□ 14.6
PCM1-212ENST00000519253 Q5W150 140 aa5.11□□□□□ -1.59
PCM1-212ENST00000519253 NF1P21359 2839 aa5.11□□□□□ -1.59
PCM1-212ENST00000519253 PLAC8Q9NZF1 115 aa5.1□□□□□ -1.59
PCM1-212ENST00000519253 MXRA5Q9NR99 2828 aa5.1□□□□□ -1.59
PCM1-212ENST00000519253 DMDP11532 3685 aa5.1□□□□□ -1.59
PCM1-212ENST00000519253 COL6A5A8TX70 2615 aa5.09□□□□□ -1.59
PCM1-212ENST00000519253 LAMA5O15230 3695 aa5.09□□□□□ -1.59
PCM1-212ENST00000519253 FBN2P35556 2912 aa5.09□□□□□ -1.6
PCM1-212ENST00000519253 DCHS2Q6V1P9 2916 aa5.08□□□□□ -1.6
PCM1-212ENST00000519253 APCP25054 2843 aa5.08□□□□□ -1.6
PCM1-212ENST00000519253 PLA2G1BP04054 148 aaKnown RBP5.08□□□□□ -1.6
PCM1-212ENST00000519253 ZFHX4Q86UP3 3567 aa5.07□□□□□ -1.6
PCM1-212ENST00000519253 KRTAP11-1Q8IUC1 163 aa5.06□□□□□ -1.6
PCM1-212ENST00000519253 STAB1Q9NY15 2570 aa5.05□□□□□ -1.6
PCM1-212ENST00000519253 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
PCM1-212ENST00000519253 RELNP78509 3460 aa5.05□□□□□ -1.6
PCM1-212ENST00000519253 KRTAP13-1Q8IUC0 172 aa5.04□□□□□ -1.6
PCM1-212ENST00000519253 Q8N1X5 172 aa5.04□□□□□ -1.6
PCM1-212ENST00000519253 ITPR2Q14571 2701 aa5.04□□□□□ -1.6
PCM1-212ENST00000519253 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
PCM1-212ENST00000519253 PANO1I0J062 215 aa5.03□□□□□ -1.6
PCM1-212ENST00000519253 A0A087X002 238 aa5.02□□□□□ -1.61
PCM1-212ENST00000519253 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
PCM1-212ENST00000519253 LINC00304Q8N9R0 145 aa5.02□□□□□ -1.61
PCM1-212ENST00000519253 CRYBG3Q68DQ2 2970 aa5.02□□□□□ -1.61
PCM1-212ENST00000519253 NSD1Q96L73 2696 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms