RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NEDD8Q15843 81 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 ZNF56Q15929 161 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 NAA60Q9H7X0 242 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 NIT2Q9NQR4 276 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 OTORQ9NRC9 128 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 V9GYH0 126 aa1.94□□□□□ -2.1
HMGB1P23-201ENST00000518743 TRBV6-1A0A0K0K1D8 114 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 A0A1B0GV90 55 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 TMEM218A2RU14 115 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 PDCD5O14737 125 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 FABP2P12104 132 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 ROMO1P60602 79 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 NCS1P62166 190 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 LSM3P62310 102 aaKnown RBP1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 C10orf113Q5VZT2 155 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 SCN3BQ9NY72 215 aa1.93□□□□□ -2.1
HMGB1P23-201ENST00000518743 A0A087WSZ3 146 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 TRBV7-6A0A0J9YX20 115 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 C3orf85A0A1B0GTC6 90 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 J3KT08 172 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 CCL25O15444 150 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 IAPPP10997 89 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 AKR1D1P51857 326 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 SMCO1Q147U7 214 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 KRTAP13-1Q8IUC0 172 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 GGACTQ9BVM4 153 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 CACFD1Q9UGQ2 172 aa1.92□□□□□ -2.1
HMGB1P23-201ENST00000518743 A0A1B0GX51 115 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 DLEU1O43261 78 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 ERC2-IT1O76042 136 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 MT-ND4LP03901 98 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 TCRAP04437 139 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 IQCJQ1A5X6 159 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 PYY3Q5JQD4 70 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 SVBPQ8N300 66 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 ZNF625Q96I27 306 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 PFDN5Q99471 154 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 SEC11CQ9BY50 192 aa1.91□□□□□ -2.1
HMGB1P23-201ENST00000518743 IGKV3D-7A0A0C4DH55 119 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 hDV103S1A0JD37 113 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 APOC3P02656 99 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 RNASE3P12724 160 aaKnown RBP1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 RPS29P62273 56 aaKnown RBP1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 PRLHP81277 87 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 SPAG11BQ08648 103 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 PEA15Q15121 130 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 UNQ6190/PRO20217Q6UXQ8 127 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 ATP11AUNQ6ZP68 121 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 TMEM229BQ8NBD8 167 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 NMES1Q9C002 83 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 SMCO4Q9NRQ5 59 aa1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 LSM2Q9Y333 95 aaKnown RBP1.9□□□□□ -2.11
HMGB1P23-201ENST00000518743 TRAV13-1A0A0B4J241 112 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 H3BVH4 76 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 K7ERJ3 54 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 PYYP10082 97 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 KRTAP12-1P59990 96 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 FAM74A1Q5RGS3 127 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 C22orf24Q9Y442 160 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 LENEPQ9Y5L5 61 aa1.89□□□□□ -2.11
HMGB1P23-201ENST00000518743 TRBV27A0A0K0K1C4 114 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 NAP1L6A6NFF2 107 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 IFITM5A6NNB3 132 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 H3BMG7 143 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 M0R143 59 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 NDUFA1O15239 70 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 ZNF25P17030 456 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 TMEM91Q6ZNR0 172 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 RAB37Q96AX2 223 aa1.88□□□□□ -2.11
HMGB1P23-201ENST00000518743 IGKV2-29A2NJV5 120 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 DPM2O94777 84 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 TPT1P13693 172 aaKnown RBP1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 ADCYAP1P18509 176 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 HRCT1Q6UXD1 115 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 KCNRGQ8N5I3 272 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 SNHG12Q9BXW3 62 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 MRPL35Q9NZE8 188 aaKnown RBP1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 ORMDL1Q9P0S3 153 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 ZFP30Q9Y2G7 519 aa1.87□□□□□ -2.11
HMGB1P23-201ENST00000518743 LINC00959A0A1B0GUT2 108 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 ARPC5O15511 151 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 ARL14EPLP0DKL9 152 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 FABP4P15090 132 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 Q5VV11 94 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 TEN1Q86WV5 123 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 OR10AG1Q8NH19 301 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 TMEM242Q9NWH2 141 aa1.86□□□□□ -2.11
HMGB1P23-201ENST00000518743 C7orf77A4D0Y5 90 aa1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 FGF7P21781 194 aa1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 MRPS10P82664 201 aaKnown RBP1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 ALKAL2Q6UX46 152 aa1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 CIB3Q96Q77 187 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 TMEM14CQ9P0S9 112 aa1.85□□□□□ -2.11
HMGB1P23-201ENST00000518743 TNFSF18Q9UNG2 199 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms