RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PLAC8Q9NZF1 115 aa16.39■□□□□ 0.21
COL13A1-210ENST00000517713 NREPQ16612 68 aa16.38■□□□□ 0.21
COL13A1-210ENST00000517713 SPRR1BP22528 89 aa16.36■□□□□ 0.21
COL13A1-210ENST00000517713 ATOX1O00244 68 aa16.35■□□□□ 0.21
COL13A1-210ENST00000517713 SPRR4Q96PI1 79 aa16.34■□□□□ 0.21
COL13A1-210ENST00000517713 ALMS1Q8TCU4 4167 aa16.34■□□□□ 0.21
COL13A1-210ENST00000517713 IGLV8-61A0A075B6I0 122 aa16.33■□□□□ 0.21
COL13A1-210ENST00000517713 SCXQ7RTU7 201 aa16.33■□□□□ 0.2
COL13A1-210ENST00000517713 CCDC179H3BU77 68 aa16.32■□□□□ 0.2
COL13A1-210ENST00000517713 IGFL1Q6UW32 110 aa16.31■□□□□ 0.2
COL13A1-210ENST00000517713 PSORS1C2Q9UIG4 136 aa16.28■□□□□ 0.2
COL13A1-210ENST00000517713 A0A0G2JQZ4 141 aa16.27■□□□□ 0.2
COL13A1-210ENST00000517713 CRYGAP11844 174 aa16.27■□□□□ 0.2
COL13A1-210ENST00000517713 KRTAP10-2P60368 255 aa16.26■□□□□ 0.19
COL13A1-210ENST00000517713 BPY2O14599 106 aa16.23■□□□□ 0.19
COL13A1-210ENST00000517713 FRAS1Q86XX4 4008 aa16.21■□□□□ 0.19
COL13A1-210ENST00000517713 SRRM2Q9UQ35 2752 aaKnown RBP16.19■□□□□ 0.18
COL13A1-210ENST00000517713 COX7CP15954 63 aa16.18■□□□□ 0.18
COL13A1-210ENST00000517713 UQCRQO14949 82 aa16.18■□□□□ 0.18
COL13A1-210ENST00000517713 FAM30AQ9NZY2 134 aa16.16■□□□□ 0.18
COL13A1-210ENST00000517713 ZNF861PO60384 105 aa16.15■□□□□ 0.18
COL13A1-210ENST00000517713 SERP2Q8N6R1 65 aa16.15■□□□□ 0.18
COL13A1-210ENST00000517713 Q8N9L7 120 aa16.15■□□□□ 0.18
COL13A1-210ENST00000517713 IGKV4-1P06312 121 aa16.14■□□□□ 0.17
COL13A1-210ENST00000517713 ZNF706Q9Y5V0 76 aaPredicted RBP16.14■□□□□ 0.17
COL13A1-210ENST00000517713 DNAH8Q96JB1 4490 aa16.13■□□□□ 0.17
COL13A1-210ENST00000517713 LINC00483Q53H64 154 aa16.12■□□□□ 0.17
COL13A1-210ENST00000517713 CIRBP-AS1Q8TBR5 109 aa16.11■□□□□ 0.17
COL13A1-210ENST00000517713 HYDINQ4G0P3 5121 aa16.11■□□□□ 0.17
COL13A1-210ENST00000517713 A0A087WSZ3 146 aa16.1■□□□□ 0.17
COL13A1-210ENST00000517713 DNAH11Q96DT5 4516 aa16.1■□□□□ 0.17
COL13A1-210ENST00000517713 C9orf153Q5TBE3 101 aa16.07■□□□□ 0.16
COL13A1-210ENST00000517713 KRTAP10-1P60331 282 aa16.06■□□□□ 0.16
COL13A1-210ENST00000517713 IGLV9-49A0A0B4J1Y8 123 aa16.06■□□□□ 0.16
COL13A1-210ENST00000517713 IGLV7-43P04211 117 aa16.06■□□□□ 0.16
COL13A1-210ENST00000517713 Q6ZSA8 131 aa16.05■□□□□ 0.16
COL13A1-210ENST00000517713 DNAH5Q8TE73 4624 aa16.05■□□□□ 0.16
COL13A1-210ENST00000517713 DSCR10P59022 87 aa16.02■□□□□ 0.15
COL13A1-210ENST00000517713 PKD1P98161 4303 aa16.01■□□□□ 0.15
COL13A1-210ENST00000517713 SMIM20Q8N5G0 67 aa16■□□□□ 0.15
COL13A1-210ENST00000517713 FAT2Q9NYQ8 4349 aa15.99■□□□□ 0.15
COL13A1-210ENST00000517713 TRAV7A0A075B6U4 112 aa15.97■□□□□ 0.15
COL13A1-210ENST00000517713 RPL37AP61513 92 aaKnown RBP15.97■□□□□ 0.15
COL13A1-210ENST00000517713 ANAPC11Q9NYG5 84 aa15.96■□□□□ 0.15
COL13A1-210ENST00000517713 DEFB116Q30KQ4 102 aa15.95■□□□□ 0.14
COL13A1-210ENST00000517713 K7EQZ3 153 aa15.94■□□□□ 0.14
COL13A1-210ENST00000517713 MOBPQ13875 183 aa15.91■□□□□ 0.14
COL13A1-210ENST00000517713 LCE6AA0A183 80 aa15.9■□□□□ 0.14
COL13A1-210ENST00000517713 LINC00472Q9H8W2 130 aa15.87■□□□□ 0.13
COL13A1-210ENST00000517713 SS18L2Q9UHA2 77 aa15.87■□□□□ 0.13
COL13A1-210ENST00000517713 HRCT1Q6UXD1 115 aa15.84■□□□□ 0.13
COL13A1-210ENST00000517713 CYSTM1Q9H1C7 97 aa15.84■□□□□ 0.13
COL13A1-210ENST00000517713 LINC00336Q6ZUF6 198 aa15.82■□□□□ 0.12
COL13A1-210ENST00000517713 C20orf197Q8N268 126 aa15.82■□□□□ 0.12
COL13A1-210ENST00000517713 SACSQ9NZJ4 4579 aa15.81■□□□□ 0.12
COL13A1-210ENST00000517713 OCR1Q9BZK8 76 aa15.79■□□□□ 0.12
COL13A1-210ENST00000517713 HCG22E2RYF7 251 aa15.78■□□□□ 0.12
COL13A1-210ENST00000517713 A8MWP4 228 aa15.75■□□□□ 0.11
COL13A1-210ENST00000517713 J3KT08 172 aa15.74■□□□□ 0.11
COL13A1-210ENST00000517713 PRR15Q8IV56 129 aa15.73■□□□□ 0.11
COL13A1-210ENST00000517713 Q96NJ1 140 aa15.72■□□□□ 0.11
COL13A1-210ENST00000517713 LRP1BQ9NZR2 4599 aa15.7■□□□□ 0.1
COL13A1-210ENST00000517713 KLKP1Q107X0 134 aa15.68■□□□□ 0.1
COL13A1-210ENST00000517713 SSBP3-AS1Q7Z2R9 100 aa15.68■□□□□ 0.1
COL13A1-210ENST00000517713 WFDC13Q8IUB5 93 aa15.67■□□□□ 0.1
COL13A1-210ENST00000517713 SNURFQ9Y675 71 aa15.66■□□□□ 0.1
COL13A1-210ENST00000517713 A0A1B0GVY2 172 aa15.64■□□□□ 0.09
COL13A1-210ENST00000517713 NDUFB1O75438 58 aa15.63■□□□□ 0.09
COL13A1-210ENST00000517713 TMEM258P61165 79 aa15.63■□□□□ 0.09
COL13A1-210ENST00000517713 TMEM254Q8TBM7 123 aa15.63■□□□□ 0.09
COL13A1-210ENST00000517713 KRTAP29-1A8MX34 341 aaPredicted RBP15.62■□□□□ 0.09
COL13A1-210ENST00000517713 CD164Q04900 197 aa15.62■□□□□ 0.09
COL13A1-210ENST00000517713 A0A087X002 238 aa15.61■□□□□ 0.09
COL13A1-210ENST00000517713 FAM229BQ4G0N7 80 aa15.61■□□□□ 0.09
COL13A1-210ENST00000517713 CASC2Q6XLA1 102 aa15.6■□□□□ 0.09
COL13A1-210ENST00000517713 KRTAP13-2Q52LG2 175 aa15.58■□□□□ 0.08
COL13A1-210ENST00000517713 H7BZZ5 65 aa15.56■□□□□ 0.08
COL13A1-210ENST00000517713 PKHD1P08F94 4074 aa15.55■□□□□ 0.08
COL13A1-210ENST00000517713 KRTAP1-4P0C5Y4 121 aa15.55■□□□□ 0.08
COL13A1-210ENST00000517713 A0A0U1RQV1 116 aa15.54■□□□□ 0.08
COL13A1-210ENST00000517713 MMP24-AS1A0A0U1RRL7 71 aa15.53■□□□□ 0.08
COL13A1-210ENST00000517713 VPS13BQ7Z7G8 4022 aa15.51■□□□□ 0.07
COL13A1-210ENST00000517713 CDK2AP2O75956 126 aa15.51■□□□□ 0.07
COL13A1-210ENST00000517713 NDUFC1O43677 76 aa15.5■□□□□ 0.07
COL13A1-210ENST00000517713 A0A1B0GVX0 72 aa15.48■□□□□ 0.07
COL13A1-210ENST00000517713 C5orf47Q569G3 176 aa15.48■□□□□ 0.07
COL13A1-210ENST00000517713 hDV103S1A0JD37 113 aa15.46■□□□□ 0.07
COL13A1-210ENST00000517713 RYR2Q92736 4967 aa15.46■□□□□ 0.07
COL13A1-210ENST00000517713 IGHV6-1A0A0B4J1U7 121 aa15.45■□□□□ 0.06
COL13A1-210ENST00000517713 SPINK6Q6UWN8 80 aa15.45■□□□□ 0.06
COL13A1-210ENST00000517713 C8orf17Q9NRJ1 99 aa15.45■□□□□ 0.06
COL13A1-210ENST00000517713 PLA2G1BP04054 148 aaKnown RBP15.44■□□□□ 0.06
COL13A1-210ENST00000517713 SMR3BP02814 79 aaPredicted RBP15.44■□□□□ 0.06
COL13A1-210ENST00000517713 ASB16-AS1Q495Z4 193 aa15.44■□□□□ 0.06
COL13A1-210ENST00000517713 DYNC1H1Q14204 4646 aaKnown RBP15.43■□□□□ 0.06
COL13A1-210ENST00000517713 FAM236DA0A1B0GTK5 79 aa15.4■□□□□ 0.06
COL13A1-210ENST00000517713 FAM236CP0DP71 79 aa15.4■□□□□ 0.06
COL13A1-210ENST00000517713 Q5XG85 94 aa15.36■□□□□ 0.05
COL13A1-210ENST00000517713 ZCCHC13Q8WW36 166 aaKnown RBP15.35■□□□□ 0.05
COL13A1-210ENST00000517713 TYMSOSQ8TAI1 123 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms