RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 IFNGP01579 166 aa-0.48□□□□□ -2.49
SKP1-203ENST00000517625 C5orf38Q86SI9 138 aa-0.48□□□□□ -2.49
SKP1-203ENST00000517625 CPSF1Q10570 1443 aaKnown RBP-0.48□□□□□ -2.49
SKP1-203ENST00000517625 ARHGAP5Q13017 1502 aa-0.48□□□□□ -2.49
SKP1-203ENST00000517625 SPEF2Q9C093 1822 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 FXYD6-FXYD2A0A087WZ82 144 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 HMGN4O00479 90 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 TNFP01375 233 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 COMMD6Q7Z4G1 85 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 TSC22D3Q99576 134 aa-0.49□□□□□ -2.49
SKP1-203ENST00000517625 MIF4GDA9UHW6 222 aaKnown RBP-0.5□□□□□ -2.49
SKP1-203ENST00000517625 K7EQZ3 153 aa-0.5□□□□□ -2.49
SKP1-203ENST00000517625 SFT2D2O95562 160 aa-0.5□□□□□ -2.49
SKP1-203ENST00000517625 HMGN1P05114 100 aa-0.5□□□□□ -2.49
SKP1-203ENST00000517625 MYOZ3Q8TDC0 251 aa-0.5□□□□□ -2.49
SKP1-203ENST00000517625 ABCC8Q09428 1581 aa-0.5□□□□□ -2.49
SKP1-203ENST00000517625 MGPP08493 103 aa-0.51□□□□□ -2.49
SKP1-203ENST00000517625 CATR1Q13166 79 aa-0.51□□□□□ -2.49
SKP1-203ENST00000517625 WHAMMP3Q1A5X7 153 aa-0.51□□□□□ -2.49
SKP1-203ENST00000517625 MRPL54Q6P161 138 aaKnown RBP-0.51□□□□□ -2.49
SKP1-203ENST00000517625 TMEM263Q8WUH6 116 aaKnown RBP-0.51□□□□□ -2.49
SKP1-203ENST00000517625 CRYBG1Q9Y4K1 1723 aa-0.52□□□□□ -2.49
SKP1-203ENST00000517625 SPRR1BP22528 89 aa-0.52□□□□□ -2.49
SKP1-203ENST00000517625 MYO7BQ6PIF6 2116 aa-0.52□□□□□ -2.49
SKP1-203ENST00000517625 TSLPQ969D9 159 aa-0.53□□□□□ -2.49
SKP1-203ENST00000517625 AKAP12Q02952 1782 aa-0.53□□□□□ -2.49
SKP1-203ENST00000517625 KTN1Q86UP2 1357 aaKnown RBP-0.54□□□□□ -2.5
SKP1-203ENST00000517625 SPINK4O60575 86 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 AKAIN1P0CW23 69 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 SPRR4Q96PI1 79 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 NXT2Q9NPJ8 142 aaKnown RBP-0.54□□□□□ -2.5
SKP1-203ENST00000517625 FAIMQ9NVQ4 179 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 UQCR10Q9UDW1 63 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 MYH8P13535 1937 aa-0.54□□□□□ -2.5
SKP1-203ENST00000517625 UACAQ9BZF9 1416 aa-0.55□□□□□ -2.5
SKP1-203ENST00000517625 CNTLNQ9NXG0 1405 aa-0.55□□□□□ -2.5
SKP1-203ENST00000517625 MT1MQ8N339 61 aa-0.55□□□□□ -2.5
SKP1-203ENST00000517625 PP6455Q8WZ26 134 aa-0.55□□□□□ -2.5
SKP1-203ENST00000517625 CDC42SE2Q9NRR3 84 aa-0.55□□□□□ -2.5
SKP1-203ENST00000517625 RRBP1Q9P2E9 1410 aaKnown RBP-0.55□□□□□ -2.5
SKP1-203ENST00000517625 TRBV7-4A0A0J9YYF1 115 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 UBE2L5PA0A1B0GUS4 154 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 LOC100130705A0A1B0GUX0 176 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 CHKB-CPT1BH3BT56 60 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 MT1GP13640 62 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 ATP5EP56381 51 aaPredicted RBP-0.56□□□□□ -2.5
SKP1-203ENST00000517625 UBE2L3P68036 154 aaKnown RBP-0.56□□□□□ -2.5
SKP1-203ENST00000517625 SCAPERQ9BY12 1400 aa-0.56□□□□□ -2.5
SKP1-203ENST00000517625 SYCP2Q9BX26 1530 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 IGLC1P0CG04 106 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 FAM167A-AS1Q96KT0 104 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 FAM107BQ9H098 131 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 LINC00474Q9P2X8 69 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 NCOA2Q15596 1464 aa-0.57□□□□□ -2.5
SKP1-203ENST00000517625 OOSP1A8MZH6 123 aa-0.58□□□□□ -2.5
SKP1-203ENST00000517625 C10orf113Q5VZT2 155 aa-0.58□□□□□ -2.5
SKP1-203ENST00000517625 SMIM5Q71RC9 77 aa-0.58□□□□□ -2.5
SKP1-203ENST00000517625 F6UZH7 168 aa-0.59□□□□□ -2.5
SKP1-203ENST00000517625 C9orf153Q5TBE3 101 aa-0.59□□□□□ -2.5
SKP1-203ENST00000517625 IQGAP2Q13576 1575 aa-0.59□□□□□ -2.5
SKP1-203ENST00000517625 FYCO1Q9BQS8 1478 aa-0.6□□□□□ -2.5
SKP1-203ENST00000517625 FAM24AA6NFZ4 105 aa-0.6□□□□□ -2.51
SKP1-203ENST00000517625 UBA52P62987 128 aaKnown RBP-0.6□□□□□ -2.51
SKP1-203ENST00000517625 DPH3P1Q9H4G8 78 aa-0.6□□□□□ -2.51
SKP1-203ENST00000517625 IER3IP1Q9Y5U9 82 aa-0.6□□□□□ -2.51
SKP1-203ENST00000517625 ABCA10Q8WWZ4 1543 aa-0.6□□□□□ -2.51
SKP1-203ENST00000517625 EFCAB10A6NFE3 127 aa-0.61□□□□□ -2.51
SKP1-203ENST00000517625 H0YAA0 97 aa-0.61□□□□□ -2.51
SKP1-203ENST00000517625 COX6B2Q6YFQ2 88 aa-0.61□□□□□ -2.51
SKP1-203ENST00000517625 ARL2-SNX15V9GYD0 113 aa-0.61□□□□□ -2.51
SKP1-203ENST00000517625 COX6CP09669 75 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 RPL13AP3Q6NVV1 102 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 FAM223AQ8IWN6 122 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 USMG5Q96IX5 58 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 PRO1933Q9H354 126 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 ROCK2O75116 1388 aaKnown RBP-0.62□□□□□ -2.51
SKP1-203ENST00000517625 FOCADQ5VW36 1801 aa-0.62□□□□□ -2.51
SKP1-203ENST00000517625 LINC00959A0A1B0GUT2 108 aa-0.63□□□□□ -2.51
SKP1-203ENST00000517625 COX8AP10176 69 aa-0.63□□□□□ -2.51
SKP1-203ENST00000517625 GNG11P61952 73 aa-0.63□□□□□ -2.51
SKP1-203ENST00000517625 MT1EP04732 61 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 UBE2D3P61077 147 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 UBE2D2P62837 147 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 DEFB105AQ8NG35 78 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 LINC01600Q96MT4 127 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 PSME4Q14997 1843 aa-0.64□□□□□ -2.51
SKP1-203ENST00000517625 FANCD2Q9BXW9 1451 aa-0.65□□□□□ -2.51
SKP1-203ENST00000517625 NAP1L6A6NFF2 107 aa-0.65□□□□□ -2.51
SKP1-203ENST00000517625 H3BQ15 152 aa-0.65□□□□□ -2.51
SKP1-203ENST00000517625 A0A1B0GWA3 101 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 SYS1-DBNDD2H3BUS1 97 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 SNAPC5O75971 98 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 TRAPPC2P0DI81 140 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 TRAPPC2BP0DI82 140 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 Q0VG73 95 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 FDCSPQ8NFU4 85 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 FXYD6Q9H0Q3 95 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 MANBALQ9NQG1 85 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 PRO1854Q9UHT4 67 aa-0.66□□□□□ -2.52
SKP1-203ENST00000517625 ARFGEF2Q9Y6D5 1785 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms