RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 A0A0D9SG42 100 aa10.14□□□□□ -0.79
TRIM41-207ENST00000515223 PRR26Q8N8Z3 221 aa10.13□□□□□ -0.79
TRIM41-207ENST00000515223 Q8NDZ9 215 aa10.12□□□□□ -0.79
TRIM41-207ENST00000515223 FRYLO94915 3013 aa10.11□□□□□ -0.79
TRIM41-207ENST00000515223 Q5XG85 94 aa10.1□□□□□ -0.79
TRIM41-207ENST00000515223 CDC42SE1Q9NRR8 79 aa10.1□□□□□ -0.79
TRIM41-207ENST00000515223 FAM229BQ4G0N7 80 aa10.09□□□□□ -0.79
TRIM41-207ENST00000515223 OCR1Q9BZK8 76 aa10.08□□□□□ -0.8
TRIM41-207ENST00000515223 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
TRIM41-207ENST00000515223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.08□□□□□ -0.8
TRIM41-207ENST00000515223 SPANXA2-OT1Q8N9U9 137 aa10.06□□□□□ -0.8
TRIM41-207ENST00000515223 WIPF1O43516 503 aa10.06□□□□□ -0.8
TRIM41-207ENST00000515223 CAMK2N1Q7Z7J9 78 aa10.06□□□□□ -0.8
TRIM41-207ENST00000515223 COL6A3P12111 3177 aa10.04□□□□□ -0.8
TRIM41-207ENST00000515223 SETXQ7Z333 2677 aaKnown RBP10.03□□□□□ -0.8
TRIM41-207ENST00000515223 CFAP46Q8IYW2 2715 aa10.02□□□□□ -0.8
TRIM41-207ENST00000515223 AKAP13Q12802 2813 aa10.02□□□□□ -0.81
TRIM41-207ENST00000515223 OXTP01178 125 aa10.01□□□□□ -0.81
TRIM41-207ENST00000515223 MYO15AQ9UKN7 3530 aa10.01□□□□□ -0.81
TRIM41-207ENST00000515223 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
TRIM41-207ENST00000515223 PLAC8Q9NZF1 115 aa9.99□□□□□ -0.81
TRIM41-207ENST00000515223 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
TRIM41-207ENST00000515223 CR1P17927 2039 aa9.98□□□□□ -0.81
TRIM41-207ENST00000515223 KALRNO60229 2985 aa9.95□□□□□ -0.82
TRIM41-207ENST00000515223 CENPEQ02224 2701 aa9.94□□□□□ -0.82
TRIM41-207ENST00000515223 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
TRIM41-207ENST00000515223 EYSQ5T1H1 3165 aa9.93□□□□□ -0.82
TRIM41-207ENST00000515223 BOD1L1Q8NFC6 3051 aa9.93□□□□□ -0.82
TRIM41-207ENST00000515223 USP34Q70CQ2 3546 aa9.93□□□□□ -0.82
TRIM41-207ENST00000515223 LUZP6Q538Z0 58 aa9.92□□□□□ -0.82
TRIM41-207ENST00000515223 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
TRIM41-207ENST00000515223 Q1T7F1 81 aa9.9□□□□□ -0.82
TRIM41-207ENST00000515223 ZCCHC13Q8WW36 166 aaKnown RBP9.89□□□□□ -0.83
TRIM41-207ENST00000515223 REV3LO60673 3130 aa9.89□□□□□ -0.83
TRIM41-207ENST00000515223 MAP1AP78559 2803 aaPredicted RBP9.89□□□□□ -0.83
TRIM41-207ENST00000515223 KTN1-AS1Q86SY8 53 aa9.89□□□□□ -0.83
TRIM41-207ENST00000515223 TEP1Q99973 2627 aaKnown RBP9.88□□□□□ -0.83
TRIM41-207ENST00000515223 A0A1B0GU33 70 aa9.87□□□□□ -0.83
TRIM41-207ENST00000515223 LINC00483Q53H64 154 aa9.87□□□□□ -0.83
TRIM41-207ENST00000515223 ZNF292O60281 2723 aa9.86□□□□□ -0.83
TRIM41-207ENST00000515223 HRES1P13985 223 aa9.86□□□□□ -0.83
TRIM41-207ENST00000515223 LCE6AA0A183 80 aa9.86□□□□□ -0.83
TRIM41-207ENST00000515223 Q5VSD8 79 aa9.85□□□□□ -0.83
TRIM41-207ENST00000515223 ADGRG4Q8IZF6 3080 aa9.84□□□□□ -0.83
TRIM41-207ENST00000515223 S4R3F8 94 aa9.82□□□□□ -0.84
TRIM41-207ENST00000515223 LRBAP50851 2863 aa9.81□□□□□ -0.84
TRIM41-207ENST00000515223 LCA10Q71F78 164 aa9.8□□□□□ -0.84
TRIM41-207ENST00000515223 SPRR1AP35321 89 aa9.78□□□□□ -0.84
TRIM41-207ENST00000515223 TEX15Q9BXT5 2789 aa9.77□□□□□ -0.85
TRIM41-207ENST00000515223 CHD6Q8TD26 2715 aa9.77□□□□□ -0.85
TRIM41-207ENST00000515223 MMP24-AS1A0A0U1RRL7 71 aa9.76□□□□□ -0.85
TRIM41-207ENST00000515223 SPINK7P58062 85 aa9.74□□□□□ -0.85
TRIM41-207ENST00000515223 NBEAL1Q6ZS30 2694 aa9.74□□□□□ -0.85
TRIM41-207ENST00000515223 SPRR1BP22528 89 aa9.74□□□□□ -0.85
TRIM41-207ENST00000515223 R4GN34 69 aa9.74□□□□□ -0.85
TRIM41-207ENST00000515223 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
TRIM41-207ENST00000515223 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
TRIM41-207ENST00000515223 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
TRIM41-207ENST00000515223 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.85
TRIM41-207ENST00000515223 TACC2O95359 2948 aa9.7□□□□□ -0.86
TRIM41-207ENST00000515223 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
TRIM41-207ENST00000515223 KRTAP1-5Q9BYS1 174 aa9.69□□□□□ -0.86
TRIM41-207ENST00000515223 Q5VV11 94 aa9.67□□□□□ -0.86
TRIM41-207ENST00000515223 Q75L30 129 aa9.67□□□□□ -0.86
TRIM41-207ENST00000515223 Q5W150 140 aa9.67□□□□□ -0.86
TRIM41-207ENST00000515223 ATMQ13315 3056 aa9.67□□□□□ -0.86
TRIM41-207ENST00000515223 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
TRIM41-207ENST00000515223 NBEAL2Q6ZNJ1 2754 aa9.66□□□□□ -0.86
TRIM41-207ENST00000515223 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
TRIM41-207ENST00000515223 UNC79Q9P2D8 2635 aa9.65□□□□□ -0.87
TRIM41-207ENST00000515223 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
TRIM41-207ENST00000515223 WDFY3Q8IZQ1 3526 aa9.64□□□□□ -0.87
TRIM41-207ENST00000515223 KRTAP10-2P60368 255 aa9.63□□□□□ -0.87
TRIM41-207ENST00000515223 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
TRIM41-207ENST00000515223 LOC400499M0QZD8 3231 aa9.59□□□□□ -0.87
TRIM41-207ENST00000515223 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
TRIM41-207ENST00000515223 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
TRIM41-207ENST00000515223 BAHCC1Q9P281 2608 aa9.56□□□□□ -0.88
TRIM41-207ENST00000515223 DMXL2Q8TDJ6 3036 aa9.56□□□□□ -0.88
TRIM41-207ENST00000515223 PRAC1Q96KF2 57 aa9.54□□□□□ -0.88
TRIM41-207ENST00000515223 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
TRIM41-207ENST00000515223 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
TRIM41-207ENST00000515223 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
TRIM41-207ENST00000515223 M0QZ58 72 aa9.49□□□□□ -0.89
TRIM41-207ENST00000515223 KRTAP4-16G5E9R7 235 aaPredicted RBP9.49□□□□□ -0.89
TRIM41-207ENST00000515223 Q6ZR54 194 aa9.49□□□□□ -0.89
TRIM41-207ENST00000515223 COL12A1Q99715 3063 aa9.48□□□□□ -0.89
TRIM41-207ENST00000515223 RPL37P61927 97 aaKnown RBP9.44□□□□□ -0.9
TRIM41-207ENST00000515223 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
TRIM41-207ENST00000515223 IGSF10Q6WRI0 2623 aa9.41□□□□□ -0.9
TRIM41-207ENST00000515223 ITPR1Q14643 2758 aa9.4□□□□□ -0.9
TRIM41-207ENST00000515223 ASH1LQ9NR48 2969 aaKnown RBP9.4□□□□□ -0.9
TRIM41-207ENST00000515223 KRTAP29-1A8MX34 341 aaPredicted RBP9.4□□□□□ -0.9
TRIM41-207ENST00000515223 DMXL1Q9Y485 3027 aa9.39□□□□□ -0.91
TRIM41-207ENST00000515223 DCHS1Q96JQ0 3298 aa9.37□□□□□ -0.91
TRIM41-207ENST00000515223 PANO1I0J062 215 aa9.37□□□□□ -0.91
TRIM41-207ENST00000515223 A0A087X002 238 aa9.33□□□□□ -0.92
TRIM41-207ENST00000515223 ADM2Q7Z4H4 148 aa9.33□□□□□ -0.92
TRIM41-207ENST00000515223 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
TRIM41-207ENST00000515223 A0A0A0MQY5 61 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms