RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	KRTAP10-4	P60372	401 aa	Predicted RBP	4.2	□□□□□ -1.74
RACK1-231	ENST00000514183	MRPL55	Q7Z7F7	128 aa	Known RBP	4.2	□□□□□ -1.74
RACK1-231	ENST00000514183	KCNQ1DN	Q9H478	68 aa		4.2	□□□□□ -1.74
RACK1-231	ENST00000514183	IGLV1-50	A0A075B6I6	118 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183		A0A1W2PNN7	141 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	hADV29S1	A0JD25	119 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	CHTF8	P0CG12	524 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	SDIM1	Q6ZPB5	146 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	ORMDL1	Q9P0S3	153 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	DNAH8	Q96JB1	4490 aa		4.19	□□□□□ -1.74
RACK1-231	ENST00000514183	LRP1	Q07954	4544 aa	Known RBP	4.18	□□□□□ -1.74
RACK1-231	ENST00000514183	VPS25	Q9BRG1	176 aa		4.17	□□□□□ -1.74
RACK1-231	ENST00000514183	LINC00474	Q9P2X8	69 aa		4.17	□□□□□ -1.74
RACK1-231	ENST00000514183	ETDC	A0A1B0GVM5	59 aa		4.16	□□□□□ -1.74
RACK1-231	ENST00000514183	PANO1	I0J062	215 aa		4.16	□□□□□ -1.74
RACK1-231	ENST00000514183	SPRR1A	P35321	89 aa		4.16	□□□□□ -1.74
RACK1-231	ENST00000514183		Q6ZQY7	126 aa		4.16	□□□□□ -1.74
RACK1-231	ENST00000514183	FAT3	Q8TDW7	4589 aa		4.16	□□□□□ -1.74
RACK1-231	ENST00000514183	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	TMEM256-PLSCR3	K7ERE1	68 aa		4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	REG3G	Q6UW15	175 aa		4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.15	□□□□□ -1.74
RACK1-231	ENST00000514183		Q6ZRX8	168 aa		4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	PHF5A	Q7RTV0	110 aa	Known RBP	4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	SPACA4	Q8TDM5	124 aa		4.15	□□□□□ -1.74
RACK1-231	ENST00000514183	RNF213	Q63HN8	5207 aa		4.15	□□□□□ -1.75
RACK1-231	ENST00000514183		A0A0U1RQV1	116 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183		A0A1B0GV72	72 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183	MT1HL1	P0DM35	61 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183	UBE2B	P63146	152 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183	DPH3	Q96FX2	82 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183	OBSCN-AS1	Q96MR7	158 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183	DHRS4-AS1	Q9P1J3	65 aa		4.14	□□□□□ -1.75
RACK1-231	ENST00000514183		H3BQ85	93 aa		4.13	□□□□□ -1.75
RACK1-231	ENST00000514183		Q9BRP9	147 aa		4.13	□□□□□ -1.75
RACK1-231	ENST00000514183	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	FAM19A1	Q7Z5A9	133 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	KRTAP11-1	Q8IUC1	163 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	C14orf132	Q9NPU4	83 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	LAMTOR3	Q9UHA4	124 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	FAM240A	A0A1B0GVK7	77 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	GAGE2A	Q6NT46	116 aa		4.12	□□□□□ -1.75
RACK1-231	ENST00000514183	ERC2-IT1	O76042	136 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	SCGB1A1	P11684	91 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	PRLH	P81277	87 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	ST20-AS1	Q8NBB2	130 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	DEFB105A	Q8NG35	78 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	SMCR5	Q8TEV8	140 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	KRTAP4-9	Q9BYQ8	210 aa		4.11	□□□□□ -1.75
RACK1-231	ENST00000514183	PKHD1L1	Q86WI1	4243 aa		4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	LRP2	P98164	4655 aa		4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	ACYP1	P07311	99 aa		4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	NDUFV3	P56181	108 aa	Known RBP	4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	RBM3	P98179	157 aa	Known RBP	4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	SIGMAR1	Q99720	223 aa		4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	PLAC8	Q9NZF1	115 aa		4.1	□□□□□ -1.75
RACK1-231	ENST00000514183	BCE1	O60756	84 aa		4.09	□□□□□ -1.75
RACK1-231	ENST00000514183	CCK	P06307	115 aa		4.09	□□□□□ -1.75
RACK1-231	ENST00000514183	UBE2A	P49459	152 aa		4.09	□□□□□ -1.75
RACK1-231	ENST00000514183	LINC01547	P58512	204 aa	Predicted RBP	4.09	□□□□□ -1.75
RACK1-231	ENST00000514183		Q8N377	158 aa		4.09	□□□□□ -1.75
RACK1-231	ENST00000514183	HIGD2A	Q9BW72	106 aa		4.09	□□□□□ -1.75
RACK1-231	ENST00000514183	IGLV5-48	A0A075B6I7	105 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183	LOC110117498	A0A087WWA1	95 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183	KRTAP9-7	A8MTY7	169 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183	LCE4A	Q5TA78	99 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183	SPINK6	Q6UWN8	80 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183	DSCR8	Q96T75	97 aa		4.08	□□□□□ -1.76
RACK1-231	ENST00000514183		H0Y9J4	135 aa		4.07	□□□□□ -1.76
RACK1-231	ENST00000514183	MT-ATP8	P03928	68 aa		4.07	□□□□□ -1.76
RACK1-231	ENST00000514183		Q6ZQT0	140 aa		4.07	□□□□□ -1.76
RACK1-231	ENST00000514183	TNXB	P22105	4242 aa		4.07	□□□□□ -1.76
RACK1-231	ENST00000514183	TRBV7-4	A0A0J9YYF1	115 aa		4.06	□□□□□ -1.76
RACK1-231	ENST00000514183	PDE6G	P18545	87 aa		4.06	□□□□□ -1.76
RACK1-231	ENST00000514183	C3orf22	Q8N5N4	141 aa		4.06	□□□□□ -1.76
RACK1-231	ENST00000514183	KRTAP13-1	Q8IUC0	172 aa		4.05	□□□□□ -1.76
RACK1-231	ENST00000514183	LINC00846	Q9NV44	126 aa		4.05	□□□□□ -1.76
RACK1-231	ENST00000514183	PSORS1C2	Q9UIG4	136 aa		4.05	□□□□□ -1.76
RACK1-231	ENST00000514183	KRTAP10-8	P60410	259 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183	SMIM29	Q86T20	159 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183	LINC00643	Q86TS7	51 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183	KRTAP4-2	Q9BYR5	136 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183		F8WEM9	126 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183	C1orf137	Q5JT78	98 aa		4.04	□□□□□ -1.76
RACK1-231	ENST00000514183	SPRR1B	P22528	89 aa		4.03	□□□□□ -1.76
RACK1-231	ENST00000514183	ZNF861P	O60384	105 aa		4.01	□□□□□ -1.77
RACK1-231	ENST00000514183		Q6JHZ5	121 aa		4.01	□□□□□ -1.77
RACK1-231	ENST00000514183	SPRR4	Q96PI1	79 aa		4.01	□□□□□ -1.77
RACK1-231	ENST00000514183	UBL5	Q9BZL1	73 aa		4.01	□□□□□ -1.77
RACK1-231	ENST00000514183	IGLV8-61	A0A075B6I0	122 aa		4	□□□□□ -1.77
RACK1-231	ENST00000514183	IGKV3D-7	A0A0C4DH55	119 aa		4	□□□□□ -1.77
RACK1-231	ENST00000514183	TRBV7-7	A0A0K0K1E9	115 aa		4	□□□□□ -1.77
RACK1-231	ENST00000514183		A0A1W2PNM2	257 aa		4	□□□□□ -1.77
RACK1-231	ENST00000514183	IGLV7-43	P04211	117 aa		4	□□□□□ -1.77
RACK1-231	ENST00000514183	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4	□□□□□ -1.77
RACK1-231	ENST00000514183		A0A0G2JQZ4	141 aa		3.99	□□□□□ -1.77
RACK1-231	ENST00000514183	KRTAP15-1	Q3LI76	137 aa		3.99	□□□□□ -1.77
RACK1-231	ENST00000514183	ATP5EP2	Q5VTU8	51 aa		3.99	□□□□□ -1.77
RACK1-231	ENST00000514183		Q6ZVQ6	151 aa		3.99	□□□□□ -1.77
RACK1-231	ENST00000514183		Q8NBF4	154 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms