RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SPINK7P58062 85 aa3.18□□□□□ -1.9
CLDND1-229ENST00000513988 KRTAP12-2P59991 146 aa3.18□□□□□ -1.9
CLDND1-229ENST00000513988 RBM3P98179 157 aaKnown RBP3.18□□□□□ -1.9
CLDND1-229ENST00000513988 MRPL54Q6P161 138 aaKnown RBP3.18□□□□□ -1.9
CLDND1-229ENST00000513988 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CLDND1-229ENST00000513988 CBY1Q9Y3M2 126 aa3.17□□□□□ -1.9
CLDND1-229ENST00000513988 A0A1B0GWB2 263 aa3.16□□□□□ -1.9
CLDND1-229ENST00000513988 ARPC5O15511 151 aa3.16□□□□□ -1.9
CLDND1-229ENST00000513988 CEBPGP53567 150 aa3.16□□□□□ -1.9
CLDND1-229ENST00000513988 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
CLDND1-229ENST00000513988 SNRPEP62304 92 aaKnown RBP3.15□□□□□ -1.91
CLDND1-229ENST00000513988 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
CLDND1-229ENST00000513988 MAP1LC3CQ9BXW4 147 aa3.15□□□□□ -1.91
CLDND1-229ENST00000513988 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
CLDND1-229ENST00000513988 A0A1B0GXF2 115 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 SMIM27A0A1W2PRY6 76 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 LINC00587B1AMM8 73 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 F8WEM9 126 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 TMEM250H0YL14 139 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 COMMD7Q86VX2 200 aa3.14□□□□□ -1.91
CLDND1-229ENST00000513988 IGLV5-48A0A075B6I7 105 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 TMEM170BQ5T4T1 132 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 SMIM7Q9BQ49 75 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 MIEN1Q9BRT3 115 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 BATF3Q9NR55 127 aa3.13□□□□□ -1.91
CLDND1-229ENST00000513988 NDUFC2O95298 119 aa3.12□□□□□ -1.91
CLDND1-229ENST00000513988 COX7BP24311 80 aa3.12□□□□□ -1.91
CLDND1-229ENST00000513988 LINC00313P59037 77 aa3.12□□□□□ -1.91
CLDND1-229ENST00000513988 ELOF1P60002 83 aaKnown RBP3.12□□□□□ -1.91
CLDND1-229ENST00000513988 HERV-K104P63124 156 aa3.12□□□□□ -1.91
CLDND1-229ENST00000513988 CLEC2BQ92478 149 aa3.12□□□□□ -1.91
CLDND1-229ENST00000513988 LINC01549A6NIU2 74 aa3.11□□□□□ -1.91
CLDND1-229ENST00000513988 COLCA2A8K830 154 aa3.11□□□□□ -1.91
CLDND1-229ENST00000513988 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
CLDND1-229ENST00000513988 MT1XP80297 61 aa3.11□□□□□ -1.91
CLDND1-229ENST00000513988 Q6JHZ5 121 aa3.11□□□□□ -1.91
CLDND1-229ENST00000513988 ZNF815PA8K554 130 aa3.1□□□□□ -1.91
CLDND1-229ENST00000513988 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CLDND1-229ENST00000513988 UBE2V1Q13404 147 aa3.1□□□□□ -1.91
CLDND1-229ENST00000513988 C11orf86A6NJI1 115 aa3.09□□□□□ -1.91
CLDND1-229ENST00000513988 HSBP1L1C9JCN9 74 aa3.09□□□□□ -1.91
CLDND1-229ENST00000513988 SS18L2Q9UHA2 77 aa3.09□□□□□ -1.91
CLDND1-229ENST00000513988 KANTRA0A1W2PQU2 76 aa3.08□□□□□ -1.92
CLDND1-229ENST00000513988 S100A6P06703 90 aa3.08□□□□□ -1.92
CLDND1-229ENST00000513988 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
CLDND1-229ENST00000513988 PCP4L1A6NKN8 68 aa3.07□□□□□ -1.92
CLDND1-229ENST00000513988 RHEBQ15382 184 aa3.07□□□□□ -1.92
CLDND1-229ENST00000513988 SOSTDC1Q6X4U4 206 aa3.07□□□□□ -1.92
CLDND1-229ENST00000513988 SIGMAR1Q99720 223 aa3.07□□□□□ -1.92
CLDND1-229ENST00000513988 A0A0J9YXY3 114 aa3.06□□□□□ -1.92
CLDND1-229ENST00000513988 IFITM3Q01628 133 aa3.06□□□□□ -1.92
CLDND1-229ENST00000513988 KLKP1Q107X0 134 aa3.06□□□□□ -1.92
CLDND1-229ENST00000513988 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
CLDND1-229ENST00000513988 MYMXA0A1B0GTQ4 84 aa3.05□□□□□ -1.92
CLDND1-229ENST00000513988 SEC61GP60059 68 aa3.05□□□□□ -1.92
CLDND1-229ENST00000513988 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CLDND1-229ENST00000513988 TMEM223A0PJW6 202 aa3.04□□□□□ -1.92
CLDND1-229ENST00000513988 ADIRFQ15847 76 aa3.04□□□□□ -1.92
CLDND1-229ENST00000513988 C5orf47Q569G3 176 aa3.04□□□□□ -1.92
CLDND1-229ENST00000513988 TRAV13-2A0A0B4J235 113 aa3.03□□□□□ -1.92
CLDND1-229ENST00000513988 HBDP02042 147 aa3.03□□□□□ -1.92
CLDND1-229ENST00000513988 NPC2P61916 151 aa3.03□□□□□ -1.92
CLDND1-229ENST00000513988 NMUP48645 174 aa3.02□□□□□ -1.93
CLDND1-229ENST00000513988 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
CLDND1-229ENST00000513988 S100ZQ8WXG8 99 aa3.02□□□□□ -1.93
CLDND1-229ENST00000513988 LCA10Q71F78 164 aa3.01□□□□□ -1.93
CLDND1-229ENST00000513988 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
CLDND1-229ENST00000513988 PRR15Q8IV56 129 aa3.01□□□□□ -1.93
CLDND1-229ENST00000513988 NHP2Q9NX24 153 aaKnown RBP3.01□□□□□ -1.93
CLDND1-229ENST00000513988 TRBV7-6A0A0J9YX20 115 aa3□□□□□ -1.93
CLDND1-229ENST00000513988 SMLR1H3BR10 107 aa3□□□□□ -1.93
CLDND1-229ENST00000513988 OCIAD2Q56VL3 154 aa3□□□□□ -1.93
CLDND1-229ENST00000513988 SLC7A5P1Q8MH63 180 aa3□□□□□ -1.93
CLDND1-229ENST00000513988 IFITM2Q01629 132 aa2.99□□□□□ -1.93
CLDND1-229ENST00000513988 LINC00518Q8N0U6 118 aa2.99□□□□□ -1.93
CLDND1-229ENST00000513988 SPANXDQ9BXN6 97 aa2.99□□□□□ -1.93
CLDND1-229ENST00000513988 LINC01546A6NGU7 62 aa2.98□□□□□ -1.93
CLDND1-229ENST00000513988 C3orf79P0CE67 100 aa2.98□□□□□ -1.93
CLDND1-229ENST00000513988 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
CLDND1-229ENST00000513988 CYSTM1Q9H1C7 97 aa2.97□□□□□ -1.93
CLDND1-229ENST00000513988 RPS10P5Q9NQ39 176 aa2.97□□□□□ -1.93
CLDND1-229ENST00000513988 CRIPTQ9P021 101 aa2.97□□□□□ -1.93
CLDND1-229ENST00000513988 PAM16Q9Y3D7 125 aa2.97□□□□□ -1.93
CLDND1-229ENST00000513988 A0A087WSZ3 146 aa2.96□□□□□ -1.94
CLDND1-229ENST00000513988 IGKV4-1P06312 121 aa2.96□□□□□ -1.94
CLDND1-229ENST00000513988 SMCO4Q9NRQ5 59 aa2.96□□□□□ -1.94
CLDND1-229ENST00000513988 SPANXCQ9NY87 97 aa2.96□□□□□ -1.94
CLDND1-229ENST00000513988 NAT8Q9UHE5 227 aa2.96□□□□□ -1.94
CLDND1-229ENST00000513988 IGHV6-1A0A0B4J1U7 121 aa2.95□□□□□ -1.94
CLDND1-229ENST00000513988 SRP19P09132 144 aaKnown RBP2.95□□□□□ -1.94
CLDND1-229ENST00000513988 TSPEAR-AS2P59090 65 aa2.94□□□□□ -1.94
CLDND1-229ENST00000513988 ADAMTSL4-AS1Q5T5F5 129 aa2.94□□□□□ -1.94
CLDND1-229ENST00000513988 CSAG1Q6PB30 78 aa2.94□□□□□ -1.94
CLDND1-229ENST00000513988 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
CLDND1-229ENST00000513988 DSCR8Q96T75 97 aa2.94□□□□□ -1.94
CLDND1-229ENST00000513988 H3BUT2 72 aa2.93□□□□□ -1.94
CLDND1-229ENST00000513988 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
CLDND1-229ENST00000513988 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
CLDND1-229ENST00000513988 LYRM7Q5U5X0 104 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms