RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
DDX41-215ENST00000512431 C6orf99Q4VX62 202 aa6.4□□□□□ -1.38
DDX41-215ENST00000512431 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
DDX41-215ENST00000512431 SPANXCQ9NY87 97 aa6.4□□□□□ -1.38
DDX41-215ENST00000512431 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
DDX41-215ENST00000512431 ADAMTSL4-AS1Q5T5F5 129 aa6.39□□□□□ -1.39
DDX41-215ENST00000512431 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
DDX41-215ENST00000512431 A0A0J9YXY3 114 aa6.37□□□□□ -1.39
DDX41-215ENST00000512431 SCGB1D1O95968 90 aa6.37□□□□□ -1.39
DDX41-215ENST00000512431 MT1FP04733 61 aa6.37□□□□□ -1.39
DDX41-215ENST00000512431 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
DDX41-215ENST00000512431 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
DDX41-215ENST00000512431 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
DDX41-215ENST00000512431 LINC00308Q8TCZ7 52 aa6.35□□□□□ -1.39
DDX41-215ENST00000512431 LITAFQ99732 161 aa6.35□□□□□ -1.39
DDX41-215ENST00000512431 TRBV7-6A0A0J9YX20 115 aa6.34□□□□□ -1.39
DDX41-215ENST00000512431 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
DDX41-215ENST00000512431 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
DDX41-215ENST00000512431 LINC00518Q8N0U6 118 aa6.34□□□□□ -1.39
DDX41-215ENST00000512431 Q96NJ1 140 aa6.34□□□□□ -1.39
DDX41-215ENST00000512431 ZNF815PA8K554 130 aa6.33□□□□□ -1.4
DDX41-215ENST00000512431 F8WEM9 126 aa6.33□□□□□ -1.4
DDX41-215ENST00000512431 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
DDX41-215ENST00000512431 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
DDX41-215ENST00000512431 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
DDX41-215ENST00000512431 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
DDX41-215ENST00000512431 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
DDX41-215ENST00000512431 PAM16Q9Y3D7 125 aa6.3□□□□□ -1.4
DDX41-215ENST00000512431 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
DDX41-215ENST00000512431 NHP2Q9NX24 153 aaKnown RBP6.29□□□□□ -1.4
DDX41-215ENST00000512431 TRBV7-7A0A0K0K1E9 115 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 A4D1N5 150 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 TIMM17BO60830 172 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 VAMP8Q9BV40 100 aa6.28□□□□□ -1.4
DDX41-215ENST00000512431 COX8AP10176 69 aa6.27□□□□□ -1.41
DDX41-215ENST00000512431 C14orf144Q96I85 54 aa6.27□□□□□ -1.41
DDX41-215ENST00000512431 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
DDX41-215ENST00000512431 LST1O00453 97 aa6.26□□□□□ -1.41
DDX41-215ENST00000512431 Q6JHZ5 121 aa6.26□□□□□ -1.41
DDX41-215ENST00000512431 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
DDX41-215ENST00000512431 A8MUU9 505 aa6.25□□□□□ -1.41
DDX41-215ENST00000512431 CLEC2BQ92478 149 aa6.25□□□□□ -1.41
DDX41-215ENST00000512431 A6NDN8 102 aa6.24□□□□□ -1.41
DDX41-215ENST00000512431 C2orf91Q6ZV80 131 aa6.24□□□□□ -1.41
DDX41-215ENST00000512431 DLEU1O43261 78 aa6.23□□□□□ -1.41
DDX41-215ENST00000512431 TRAV13-2A0A0B4J235 113 aa6.22□□□□□ -1.41
DDX41-215ENST00000512431 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
DDX41-215ENST00000512431 COPS9Q8WXC6 57 aa6.21□□□□□ -1.42
DDX41-215ENST00000512431 SMIM6P0DI80 62 aa6.2□□□□□ -1.42
DDX41-215ENST00000512431 OCIAD2Q56VL3 154 aa6.19□□□□□ -1.42
DDX41-215ENST00000512431 VAMP3Q15836 100 aa6.18□□□□□ -1.42
DDX41-215ENST00000512431 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
DDX41-215ENST00000512431 IFITM1P13164 125 aa6.17□□□□□ -1.42
DDX41-215ENST00000512431 Q6ZVH6 145 aa6.17□□□□□ -1.42
DDX41-215ENST00000512431 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
DDX41-215ENST00000512431 Q6ZQY7 126 aa6.15□□□□□ -1.42
DDX41-215ENST00000512431 MTURNQ8N3F0 131 aa6.15□□□□□ -1.42
DDX41-215ENST00000512431 SMIM11BQ8TCY0 68 aa6.15□□□□□ -1.42
DDX41-215ENST00000512431 HIST1H4GQ99525 98 aa6.15□□□□□ -1.42
DDX41-215ENST00000512431 C12orf57Q99622 126 aa6.15□□□□□ -1.42
DDX41-215ENST00000512431 MPLKIPQ8TAP9 179 aa6.14□□□□□ -1.43
DDX41-215ENST00000512431 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
DDX41-215ENST00000512431 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
DDX41-215ENST00000512431 HRES1P13985 223 aa6.13□□□□□ -1.43
DDX41-215ENST00000512431 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
DDX41-215ENST00000512431 NEBP20929 6669 aa6.13□□□□□ -1.43
DDX41-215ENST00000512431 KRTAP16-1A8MUX0 517 aa6.12□□□□□ -1.43
DDX41-215ENST00000512431 FXYD2P54710 66 aa6.12□□□□□ -1.43
DDX41-215ENST00000512431 DSCR10P59022 87 aa6.12□□□□□ -1.43
DDX41-215ENST00000512431 CEND1Q8N111 149 aa6.12□□□□□ -1.43
DDX41-215ENST00000512431 SNHG12Q9BXW3 62 aa6.11□□□□□ -1.43
DDX41-215ENST00000512431 KRTAP20-1Q3LI63 56 aa6.1□□□□□ -1.43
DDX41-215ENST00000512431 HSD52Q0P140 79 aa6.09□□□□□ -1.43
DDX41-215ENST00000512431 A8MWP4 228 aa6.08□□□□□ -1.44
DDX41-215ENST00000512431 LINC00313P59037 77 aa6.08□□□□□ -1.44
DDX41-215ENST00000512431 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
DDX41-215ENST00000512431 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
DDX41-215ENST00000512431 H3BUT2 72 aa6.07□□□□□ -1.44
DDX41-215ENST00000512431 K7ERJ3 54 aa6.07□□□□□ -1.44
DDX41-215ENST00000512431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.07□□□□□ -1.44
DDX41-215ENST00000512431 A0A0B4J2C4 111 aa6.06□□□□□ -1.44
DDX41-215ENST00000512431 TEN1Q86WV5 123 aa6.06□□□□□ -1.44
DDX41-215ENST00000512431 BVES-AS1Q5T3Y7 98 aa6.05□□□□□ -1.44
DDX41-215ENST00000512431 Q8N9P0 234 aaPredicted RBP6.05□□□□□ -1.44
DDX41-215ENST00000512431 SIGMAR1Q99720 223 aa6.05□□□□□ -1.44
DDX41-215ENST00000512431 A0A087WSZ3 146 aa6.04□□□□□ -1.44
DDX41-215ENST00000512431 TSTD3H0UI37 97 aa6.03□□□□□ -1.44
DDX41-215ENST00000512431 RAB37Q96AX2 223 aa6.02□□□□□ -1.45
DDX41-215ENST00000512431 PRO1854Q9UHT4 67 aa6.01□□□□□ -1.45
DDX41-215ENST00000512431 TMEM238LA0A1B0GVL6 79 aa6□□□□□ -1.45
DDX41-215ENST00000512431 A6NJY4 79 aa6□□□□□ -1.45
DDX41-215ENST00000512431 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
DDX41-215ENST00000512431 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
DDX41-215ENST00000512431 TRIAP1O43715 76 aa5.98□□□□□ -1.45
DDX41-215ENST00000512431 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
DDX41-215ENST00000512431 M0R143 59 aa5.96□□□□□ -1.46
DDX41-215ENST00000512431 SNCGO76070 127 aa5.96□□□□□ -1.46
DDX41-215ENST00000512431 NDUFV3P56181 108 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms