RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 FAM229BQ4G0N7 80 aa9.28□□□□□ -0.92
TRIO-218ENST00000512070 STAB2Q8WWQ8 2551 aa9.27□□□□□ -0.93
TRIO-218ENST00000512070 DMAC1Q96GE9 116 aa9.27□□□□□ -0.93
TRIO-218ENST00000512070 TEP1Q99973 2627 aaKnown RBP9.25□□□□□ -0.93
TRIO-218ENST00000512070 A0A0A0MQY5 61 aa9.24□□□□□ -0.93
TRIO-218ENST00000512070 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
TRIO-218ENST00000512070 Q8N1X5 172 aa9.24□□□□□ -0.93
TRIO-218ENST00000512070 SZT2Q5T011 3432 aa9.23□□□□□ -0.93
TRIO-218ENST00000512070 CAMK2N1Q7Z7J9 78 aa9.22□□□□□ -0.93
TRIO-218ENST00000512070 ZNF292O60281 2723 aa9.21□□□□□ -0.93
TRIO-218ENST00000512070 A0A1W2PNN7 141 aa9.21□□□□□ -0.94
TRIO-218ENST00000512070 MGAQ8IWI9 3026 aa9.2□□□□□ -0.94
TRIO-218ENST00000512070 Q6ZSA8 131 aa9.2□□□□□ -0.94
TRIO-218ENST00000512070 TNP2Q05952 138 aa9.2□□□□□ -0.94
TRIO-218ENST00000512070 WDFY4Q6ZS81 3184 aa9.19□□□□□ -0.94
TRIO-218ENST00000512070 VPS13AQ96RL7 3174 aa9.18□□□□□ -0.94
TRIO-218ENST00000512070 DNAH14Q0VDD8 3507 aa9.18□□□□□ -0.94
TRIO-218ENST00000512070 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
TRIO-218ENST00000512070 A0A096LNT2 108 aa9.16□□□□□ -0.94
TRIO-218ENST00000512070 LAMA1P25391 3075 aa9.15□□□□□ -0.94
TRIO-218ENST00000512070 PRR26Q8N8Z3 221 aa9.15□□□□□ -0.95
TRIO-218ENST00000512070 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
TRIO-218ENST00000512070 ANAPC11Q9NYG5 84 aa9.12□□□□□ -0.95
TRIO-218ENST00000512070 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
TRIO-218ENST00000512070 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
TRIO-218ENST00000512070 BAHCC1Q9P281 2608 aa9.11□□□□□ -0.95
TRIO-218ENST00000512070 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
TRIO-218ENST00000512070 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
TRIO-218ENST00000512070 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.96
TRIO-218ENST00000512070 VCANP13611 3396 aa9.08□□□□□ -0.96
TRIO-218ENST00000512070 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
TRIO-218ENST00000512070 ITPR2Q14571 2701 aa9.07□□□□□ -0.96
TRIO-218ENST00000512070 S4R3F8 94 aa9.06□□□□□ -0.96
TRIO-218ENST00000512070 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
TRIO-218ENST00000512070 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
TRIO-218ENST00000512070 CELSR3Q9NYQ7 3312 aa9.01□□□□□ -0.97
TRIO-218ENST00000512070 SPRR1AP35321 89 aa9.01□□□□□ -0.97
TRIO-218ENST00000512070 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
TRIO-218ENST00000512070 DSPP15924 2871 aaKnown RBP8.99□□□□□ -0.97
TRIO-218ENST00000512070 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
TRIO-218ENST00000512070 SPRR1BP22528 89 aa8.98□□□□□ -0.97
TRIO-218ENST00000512070 Q5XG85 94 aa8.98□□□□□ -0.97
TRIO-218ENST00000512070 SPTBN5Q9NRC6 3674 aaKnown RBP8.98□□□□□ -0.97
TRIO-218ENST00000512070 Q5VV11 94 aa8.97□□□□□ -0.97
TRIO-218ENST00000512070 KRTAP10-3P60369 221 aa8.97□□□□□ -0.97
TRIO-218ENST00000512070 CASC10Q5T4H9 136 aa8.97□□□□□ -0.97
TRIO-218ENST00000512070 R4GN34 69 aa8.96□□□□□ -0.98
TRIO-218ENST00000512070 H3BS24 57 aa8.95□□□□□ -0.98
TRIO-218ENST00000512070 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
TRIO-218ENST00000512070 NSD1Q96L73 2696 aaPredicted RBP8.95□□□□□ -0.98
TRIO-218ENST00000512070 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
TRIO-218ENST00000512070 ROMO1P60602 79 aa8.93□□□□□ -0.98
TRIO-218ENST00000512070 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
TRIO-218ENST00000512070 Q5W150 140 aa8.92□□□□□ -0.98
TRIO-218ENST00000512070 SEC61BP60468 96 aaKnown RBP8.91□□□□□ -0.98
TRIO-218ENST00000512070 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.91□□□□□ -0.98
TRIO-218ENST00000512070 APCP25054 2843 aa8.9□□□□□ -0.98
TRIO-218ENST00000512070 SPINK7P58062 85 aa8.89□□□□□ -0.99
TRIO-218ENST00000512070 COL6A3P12111 3177 aa8.89□□□□□ -0.99
TRIO-218ENST00000512070 REV3LO60673 3130 aa8.86□□□□□ -0.99
TRIO-218ENST00000512070 FRYQ5TBA9 3013 aa8.86□□□□□ -0.99
TRIO-218ENST00000512070 EYSQ5T1H1 3165 aa8.85□□□□□ -0.99
TRIO-218ENST00000512070 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
TRIO-218ENST00000512070 NBEAL2Q6ZNJ1 2754 aa8.82□□□□□ -1
TRIO-218ENST00000512070 Q6ZR54 194 aa8.82□□□□□ -1
TRIO-218ENST00000512070 TNRC18O15417 2968 aaPredicted RBP8.81□□□□□ -1
TRIO-218ENST00000512070 FRYLO94915 3013 aa8.79□□□□□ -1
TRIO-218ENST00000512070 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
TRIO-218ENST00000512070 BOD1L1Q8NFC6 3051 aa8.78□□□□□ -1
TRIO-218ENST00000512070 SPEGQ15772 3267 aa8.78□□□□□ -1
TRIO-218ENST00000512070 KRTAP1-1Q07627 177 aa8.78□□□□□ -1
TRIO-218ENST00000512070 IGSF10Q6WRI0 2623 aa8.77□□□□□ -1.01
TRIO-218ENST00000512070 PRAC1Q96KF2 57 aa8.77□□□□□ -1.01
TRIO-218ENST00000512070 UTP20O75691 2785 aaKnown RBP8.74□□□□□ -1.01
TRIO-218ENST00000512070 NBEAQ8NFP9 2946 aa8.73□□□□□ -1.01
TRIO-218ENST00000512070 Q5VSD8 79 aa8.71□□□□□ -1.01
TRIO-218ENST00000512070 UBR5O95071 2799 aaPredicted RBP8.71□□□□□ -1.01
TRIO-218ENST00000512070 ITPR1Q14643 2758 aa8.71□□□□□ -1.02
TRIO-218ENST00000512070 CYSTM1Q9H1C7 97 aa8.69□□□□□ -1.02
TRIO-218ENST00000512070 KRTAP26-1Q6PEX3 210 aa8.68□□□□□ -1.02
TRIO-218ENST00000512070 M0QZ58 72 aa8.68□□□□□ -1.02
TRIO-218ENST00000512070 MYO15AQ9UKN7 3530 aa8.67□□□□□ -1.02
TRIO-218ENST00000512070 DMXL2Q8TDJ6 3036 aa8.67□□□□□ -1.02
TRIO-218ENST00000512070 FREM2Q5SZK8 3169 aa8.64□□□□□ -1.03
TRIO-218ENST00000512070 PANO1I0J062 215 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 OXTP01178 125 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 Q8NDZ9 215 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 KRTAP16-1A8MUX0 517 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 LRBAP50851 2863 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 ADGRG4Q8IZF6 3080 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 FLNCQ14315 2725 aa8.63□□□□□ -1.03
TRIO-218ENST00000512070 USP34Q70CQ2 3546 aa8.62□□□□□ -1.03
TRIO-218ENST00000512070 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
TRIO-218ENST00000512070 ATMQ13315 3056 aa8.6□□□□□ -1.03
TRIO-218ENST00000512070 KALRNO60229 2985 aa8.58□□□□□ -1.04
TRIO-218ENST00000512070 DMXL1Q9Y485 3027 aa8.57□□□□□ -1.04
TRIO-218ENST00000512070 A0A087X002 238 aa8.56□□□□□ -1.04
TRIO-218ENST00000512070 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
TRIO-218ENST00000512070 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms