RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CEP250Q9BV73 2442 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 BSNQ9UPA5 3926 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 IGLV6-57P01721 117 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 HRES1P13985 223 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 DEFB1P60022 68 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 TPRXLQ17RH7 258 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 BRD3OSQ6XYD6 125 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 Q8IZM0 81 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 CDKN2A-AS1Q9UH64 79 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 ROS1P08922 2347 aa2.51□□□□□ -2.01
NIPBL-206ENST00000509429 COL6A3P12111 3177 aa2.5□□□□□ -2.01
NIPBL-206ENST00000509429 ACYP2P14621 99 aa2.5□□□□□ -2.01
NIPBL-206ENST00000509429 ZNF292O60281 2723 aa2.5□□□□□ -2.01
NIPBL-206ENST00000509429 SORL1Q92673 2214 aa2.5□□□□□ -2.01
NIPBL-206ENST00000509429 TPRP12270 2363 aaKnown RBP2.5□□□□□ -2.01
NIPBL-206ENST00000509429 ACACAQ13085 2346 aa2.5□□□□□ -2.01
NIPBL-206ENST00000509429 WDFY4Q6ZS81 3184 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 MAP1BP46821 2468 aaKnown RBP2.49□□□□□ -2.01
NIPBL-206ENST00000509429 ZFHX4Q86UP3 3567 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 MED13LQ71F56 2210 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 HRNRQ86YZ3 2850 aaPredicted RBP2.49□□□□□ -2.01
NIPBL-206ENST00000509429 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 IGKV2D-24A0A075B6R9 120 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
NIPBL-206ENST00000509429 TLN1Q9Y490 2541 aaKnown RBP2.49□□□□□ -2.01
NIPBL-206ENST00000509429 PTPRZ1P23471 2315 aaPredicted RBP2.48□□□□□ -2.01
NIPBL-206ENST00000509429 KALRNO60229 2985 aa2.48□□□□□ -2.01
NIPBL-206ENST00000509429 ZFHX2Q9C0A1 2572 aaPredicted RBP2.48□□□□□ -2.01
NIPBL-206ENST00000509429 DEFB131AP59861 70 aa2.48□□□□□ -2.01
NIPBL-206ENST00000509429 SPACA4Q8TDM5 124 aa2.48□□□□□ -2.01
NIPBL-206ENST00000509429 BOD1L1Q8NFC6 3051 aa2.48□□□□□ -2.01
NIPBL-206ENST00000509429 KMT2BQ9UMN6 2715 aaPredicted RBP2.48□□□□□ -2.01
NIPBL-206ENST00000509429 CNOT1A5YKK6 2376 aaKnown RBP2.47□□□□□ -2.01
NIPBL-206ENST00000509429 MUC3AQ02505 3323 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 PCNX1Q96RV3 2341 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 A0A096LNT2 108 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 DEFB104AQ8WTQ1 72 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 AKAP13Q12802 2813 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 PTPRQQ9UMZ3 2332 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 ADGRG4Q8IZF6 3080 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 WNK2Q9Y3S1 2297 aa2.47□□□□□ -2.01
NIPBL-206ENST00000509429 SMG1Q96Q15 3661 aaKnown RBP2.46□□□□□ -2.02
NIPBL-206ENST00000509429 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 EP300Q09472 2414 aaPredicted RBP2.46□□□□□ -2.02
NIPBL-206ENST00000509429 GVINP1Q7Z2Y8 2422 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 HTN1P15515 57 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 SSBP3-AS1Q7Z2R9 100 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 SPTA1P02549 2419 aa2.46□□□□□ -2.02
NIPBL-206ENST00000509429 INE1O15225 51 aa2.45□□□□□ -2.02
NIPBL-206ENST00000509429 LY6G6CO95867 125 aa2.45□□□□□ -2.02
NIPBL-206ENST00000509429 ANGP03950 147 aaKnown RBP2.45□□□□□ -2.02
NIPBL-206ENST00000509429 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
NIPBL-206ENST00000509429 DMXL2Q8TDJ6 3036 aa2.45□□□□□ -2.02
NIPBL-206ENST00000509429 CEP295Q9C0D2 2601 aa2.45□□□□□ -2.02
NIPBL-206ENST00000509429 DMXL1Q9Y485 3027 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 DOPEY2Q9Y3R5 2298 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 TTC28Q96AY4 2481 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 MGAQ8IWI9 3026 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.44□□□□□ -2.022e-7■■■■■ 27.8
NIPBL-206ENST00000509429 COX6A2Q02221 97 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 ASPMQ8IZT6 3477 aa2.44□□□□□ -2.02
NIPBL-206ENST00000509429 MUC6Q6W4X9 2439 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 ATMQ13315 3056 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 TACC2O95359 2948 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 C10orf99Q6UWK7 81 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 TOMM7Q9P0U1 55 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 DCHS2Q6V1P9 2916 aa2.43□□□□□ -2.02
NIPBL-206ENST00000509429 LRBAP50851 2863 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 SPTBN1Q01082 2364 aaKnown RBP2.42□□□□□ -2.02
NIPBL-206ENST00000509429 DEFB136Q30KP8 78 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 Q6ZRX8 168 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 HIVEP3Q5T1R4 2406 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 DCHS1Q96JQ0 3298 aa2.42□□□□□ -2.02
NIPBL-206ENST00000509429 NOP10Q9NPE3 64 aaKnown RBP2.41□□□□□ -2.02
NIPBL-206ENST00000509429 COL6A6A6NMZ7 2263 aa2.41□□□□□ -2.02
NIPBL-206ENST00000509429 IGF2RP11717 2491 aa2.4□□□□□ -2.03
NIPBL-206ENST00000509429 TP53AIP1Q9HCN2 124 aa2.4□□□□□ -2.03
NIPBL-206ENST00000509429 DOPEY1Q5JWR5 2465 aa2.4□□□□□ -2.03
NIPBL-206ENST00000509429 RIF1Q5UIP0 2472 aaKnown RBP2.4□□□□□ -2.03
NIPBL-206ENST00000509429 LAMA5O15230 3695 aa2.39□□□□□ -2.03
NIPBL-206ENST00000509429 PRO0255Q9UI72 69 aa2.39□□□□□ -2.03
NIPBL-206ENST00000509429 SPTAN1Q13813 2472 aaKnown RBP2.39□□□□□ -2.03
NIPBL-206ENST00000509429 GVQW2A0A096LPI5 108 aaPredicted RBP2.38□□□□□ -2.03
NIPBL-206ENST00000509429 K7EQZ3 153 aa2.38□□□□□ -2.03
NIPBL-206ENST00000509429 AKAP6Q13023 2319 aa2.38□□□□□ -2.03
NIPBL-206ENST00000509429 IGLV5-48A0A075B6I7 105 aa2.37□□□□□ -2.03
NIPBL-206ENST00000509429 ATRXP46100 2492 aa2.37□□□□□ -2.03
NIPBL-206ENST00000509429 CREBBPQ92793 2442 aa2.37□□□□□ -2.03
NIPBL-206ENST00000509429 CSMD1Q96PZ7 3565 aa2.36□□□□□ -2.03
NIPBL-206ENST00000509429 ITPR1Q14643 2758 aa2.36□□□□□ -2.03
NIPBL-206ENST00000509429 CELSR1Q9NYQ6 3014 aa2.36□□□□□ -2.03
NIPBL-206ENST00000509429 IGKV2-24A0A0C4DH68 120 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 DEFB130BP0DP73 79 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 DEFB130AP0DP74 79 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 PCOTHQ58A44 107 aa2.35□□□□□ -2.03
NIPBL-206ENST00000509429 LELP1Q5T871 98 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms