RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DNAH5Q8TE73 4624 aa9.21□□□□□ -0.94
PHF3-209ENST00000509330 F8WEM9 126 aa9.21□□□□□ -0.94
PHF3-209ENST00000509330 KRTAP10-2P60368 255 aa9.2□□□□□ -0.94
PHF3-209ENST00000509330 PKIGQ9Y2B9 76 aa9.19□□□□□ -0.94
PHF3-209ENST00000509330 NREPQ16612 68 aa9.19□□□□□ -0.94
PHF3-209ENST00000509330 BCE1O60756 84 aa9.18□□□□□ -0.94
PHF3-209ENST00000509330 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
PHF3-209ENST00000509330 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
PHF3-209ENST00000509330 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
PHF3-209ENST00000509330 Q8NBF4 154 aa9.15□□□□□ -0.94
PHF3-209ENST00000509330 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
PHF3-209ENST00000509330 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.95
PHF3-209ENST00000509330 ANAPC11Q9NYG5 84 aa9.14□□□□□ -0.95
PHF3-209ENST00000509330 BPY2O14599 106 aa9.14□□□□□ -0.95
PHF3-209ENST00000509330 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
PHF3-209ENST00000509330 IGLV9-49A0A0B4J1Y8 123 aa9.12□□□□□ -0.95
PHF3-209ENST00000509330 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
PHF3-209ENST00000509330 ATOX1O00244 68 aa9.11□□□□□ -0.95
PHF3-209ENST00000509330 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
PHF3-209ENST00000509330 A0A087WSZ3 146 aa9.1□□□□□ -0.95
PHF3-209ENST00000509330 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
PHF3-209ENST00000509330 H0Y9J4 135 aa9.09□□□□□ -0.95
PHF3-209ENST00000509330 CXCL6P80162 114 aa9.09□□□□□ -0.95
PHF3-209ENST00000509330 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
PHF3-209ENST00000509330 C9orf153Q5TBE3 101 aa9.07□□□□□ -0.96
PHF3-209ENST00000509330 CIRBP-AS1Q8TBR5 109 aa9.07□□□□□ -0.96
PHF3-209ENST00000509330 PKD1P98161 4303 aa9.07□□□□□ -0.96
PHF3-209ENST00000509330 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
PHF3-209ENST00000509330 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
PHF3-209ENST00000509330 LRP1BQ9NZR2 4599 aa9.06□□□□□ -0.96
PHF3-209ENST00000509330 CRYGAP11844 174 aa9.05□□□□□ -0.96
PHF3-209ENST00000509330 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
PHF3-209ENST00000509330 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
PHF3-209ENST00000509330 COX7CP15954 63 aa9.04□□□□□ -0.96
PHF3-209ENST00000509330 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
PHF3-209ENST00000509330 PKHD1P08F94 4074 aa9.04□□□□□ -0.96
PHF3-209ENST00000509330 SPRR1BP22528 89 aa9.02□□□□□ -0.97
PHF3-209ENST00000509330 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
PHF3-209ENST00000509330 UQCRQO14949 82 aa9.02□□□□□ -0.97
PHF3-209ENST00000509330 SERP2Q8N6R1 65 aa9.01□□□□□ -0.97
PHF3-209ENST00000509330 K7EQZ3 153 aa9.01□□□□□ -0.97
PHF3-209ENST00000509330 ZNF861PO60384 105 aa9.01□□□□□ -0.97
PHF3-209ENST00000509330 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
PHF3-209ENST00000509330 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
PHF3-209ENST00000509330 MOBPQ13875 183 aa8.99□□□□□ -0.97
PHF3-209ENST00000509330 DSCR10P59022 87 aa8.99□□□□□ -0.97
PHF3-209ENST00000509330 IGLV7-43P04211 117 aa8.97□□□□□ -0.97
PHF3-209ENST00000509330 C20orf197Q8N268 126 aa8.96□□□□□ -0.98
PHF3-209ENST00000509330 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
PHF3-209ENST00000509330 A0A1B0GW54 56 aa8.94□□□□□ -0.98
PHF3-209ENST00000509330 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
PHF3-209ENST00000509330 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
PHF3-209ENST00000509330 VPS13BQ7Z7G8 4022 aa8.91□□□□□ -0.98
PHF3-209ENST00000509330 LINC00483Q53H64 154 aa8.91□□□□□ -0.98
PHF3-209ENST00000509330 WFDC13Q8IUB5 93 aa8.91□□□□□ -0.98
PHF3-209ENST00000509330 TRAV7A0A075B6U4 112 aa8.89□□□□□ -0.99
PHF3-209ENST00000509330 Q6ZSA8 131 aa8.89□□□□□ -0.99
PHF3-209ENST00000509330 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
PHF3-209ENST00000509330 LCE6AA0A183 80 aa8.85□□□□□ -0.99
PHF3-209ENST00000509330 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
PHF3-209ENST00000509330 LINC00472Q9H8W2 130 aa8.85□□□□□ -0.99
PHF3-209ENST00000509330 RYR2Q92736 4967 aa8.84□□□□□ -0.99
PHF3-209ENST00000509330 HCG22E2RYF7 251 aa8.83□□□□□ -1
PHF3-209ENST00000509330 A0A087X002 238 aa8.83□□□□□ -1
PHF3-209ENST00000509330 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
PHF3-209ENST00000509330 OCR1Q9BZK8 76 aa8.82□□□□□ -1
PHF3-209ENST00000509330 FAT1Q14517 4588 aa8.82□□□□□ -1
PHF3-209ENST00000509330 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
PHF3-209ENST00000509330 Q96NJ1 140 aa8.79□□□□□ -1
PHF3-209ENST00000509330 A8MWP4 228 aa8.78□□□□□ -1
PHF3-209ENST00000509330 PRR15Q8IV56 129 aa8.78□□□□□ -1
PHF3-209ENST00000509330 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
PHF3-209ENST00000509330 IGHV6-1A0A0B4J1U7 121 aa8.75□□□□□ -1.01
PHF3-209ENST00000509330 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
PHF3-209ENST00000509330 CASC2Q6XLA1 102 aa8.75□□□□□ -1.01
PHF3-209ENST00000509330 NDUFB1O75438 58 aa8.73□□□□□ -1.01
PHF3-209ENST00000509330 H7BZZ5 65 aa8.72□□□□□ -1.01
PHF3-209ENST00000509330 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
PHF3-209ENST00000509330 LINC00336Q6ZUF6 198 aa8.72□□□□□ -1.01
PHF3-209ENST00000509330 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.01
PHF3-209ENST00000509330 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 RYR3Q15413 4870 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 A0A1B0GVY2 172 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 CDK2AP2O75956 126 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
PHF3-209ENST00000509330 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 TMEM258P61165 79 aa8.7□□□□□ -1.02
PHF3-209ENST00000509330 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
PHF3-209ENST00000509330 J3KT08 172 aa8.68□□□□□ -1.02
PHF3-209ENST00000509330 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
PHF3-209ENST00000509330 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
PHF3-209ENST00000509330 SSBP3-AS1Q7Z2R9 100 aa8.67□□□□□ -1.02
PHF3-209ENST00000509330 NDUFS5O43920 106 aa8.65□□□□□ -1.02
PHF3-209ENST00000509330 FAM236DA0A1B0GTK5 79 aa8.64□□□□□ -1.03
PHF3-209ENST00000509330 FAM236CP0DP71 79 aa8.64□□□□□ -1.03
PHF3-209ENST00000509330 C8orf17Q9NRJ1 99 aa8.64□□□□□ -1.03
PHF3-209ENST00000509330 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
PHF3-209ENST00000509330 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
PHF3-209ENST00000509330 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms