RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 GVINP1Q7Z2Y8 2422 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 CEP250Q9BV73 2442 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 USP34Q70CQ2 3546 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 IFI6P09912 130 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 LELP1Q5T871 98 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 MRPL34Q9BQ48 92 aaKnown RBP0.73□□□□□ -2.29
CHD1-205ENST00000508756 KNL1Q8NG31 2342 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 PKDREJQ9NTG1 2253 aa0.73□□□□□ -2.29
CHD1-205ENST00000508756 C5orf42Q9H799 3197 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 A0A087WXM4 84 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 H0YGG7 62 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 CCL22O00626 93 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 DEFB110Q30KQ9 67 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 C18orf32Q8TCD1 76 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 USP24Q9UPU5 2620 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 REV3LO60673 3130 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 LAMA2P24043 3122 aaKnown RBP0.72□□□□□ -2.29
CHD1-205ENST00000508756 CACNA1AO00555 2505 aa0.72□□□□□ -2.29
CHD1-205ENST00000508756 APC2O95996 2303 aa0.71□□□□□ -2.3
CHD1-205ENST00000508756 MAP1BP46821 2468 aaKnown RBP0.71□□□□□ -2.3
CHD1-205ENST00000508756 SMIM13P0DJ93 91 aa0.71□□□□□ -2.3
CHD1-205ENST00000508756 MYO15AQ9UKN7 3530 aa0.71□□□□□ -2.3
CHD1-205ENST00000508756 ZFYVE26Q68DK2 2539 aa0.71□□□□□ -2.3
CHD1-205ENST00000508756 ACACBO00763 2458 aa0.71□□□□□ -2.3
CHD1-205ENST00000508756 DNAH14Q0VDD8 3507 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 RPL38P63173 70 aaKnown RBP0.7□□□□□ -2.3
CHD1-205ENST00000508756 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 DEFB121Q5J5C9 76 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 SPTBN4Q9H254 2564 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 DMDP11532 3685 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 NCOR2Q9Y618 2525 aa0.7□□□□□ -2.3
CHD1-205ENST00000508756 WDFY4Q6ZS81 3184 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 MRPL33O75394 65 aaKnown RBP0.69□□□□□ -2.3
CHD1-205ENST00000508756 STATHP02808 62 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 TFF3Q07654 80 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 HEPN1Q6WQI6 88 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 CFAP54Q96N23 3096 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 PKD1L2Q7Z442 2459 aa0.69□□□□□ -2.3
CHD1-205ENST00000508756 A0A0C4DFX4 3053 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 HIVEP3Q5T1R4 2406 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 TRIOO75962 3097 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 RPS27LQ71UM5 84 aaKnown RBP0.68□□□□□ -2.3
CHD1-205ENST00000508756 SPTA1P02549 2419 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 WDFY3Q8IZQ1 3526 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 BSNQ9UPA5 3926 aa0.68□□□□□ -2.3
CHD1-205ENST00000508756 NAV2Q8IVL1 2488 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 VPS13AQ96RL7 3174 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 PCNX1Q96RV3 2341 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 BPTFQ12830 3046 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 DMXL1Q9Y485 3027 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 EPG5Q9HCE0 2579 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 ANKRD11Q6UB99 2663 aaPredicted RBP0.67□□□□□ -2.3
CHD1-205ENST00000508756 DEFB108AA8MXU0 73 aa0.67□□□□□ -2.3
CHD1-205ENST00000508756 FASNP49327 2511 aaKnown RBP0.67□□□□□ -2.3
CHD1-205ENST00000508756 CHD8Q9HCK8 2581 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 ASPMQ8IZT6 3477 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 NBASA2RRP1 2371 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 ZFHX4Q86UP3 3567 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
CHD1-205ENST00000508756 DOPEY1Q5JWR5 2465 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 LAMA1P25391 3075 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 MYO18BQ8IUG5 2567 aa0.66□□□□□ -2.3
CHD1-205ENST00000508756 TLN1Q9Y490 2541 aaKnown RBP0.66□□□□□ -2.3
CHD1-205ENST00000508756 SPEGQ15772 3267 aa0.65□□□□□ -2.3
CHD1-205ENST00000508756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.65□□□□□ -2.3
CHD1-205ENST00000508756 LAMA5O15230 3695 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 WDR87Q6ZQQ6 2873 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 CELSR3Q9NYQ7 3312 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 CEP295Q9C0D2 2601 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 UMAD1C9J7I0 102 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 M0R1W7 72 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 NDUFB1O75438 58 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 CMC2Q9NRP2 79 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 KAAG1Q9UBP8 84 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 PTPN13Q12923 2485 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 DMXL2Q8TDJ6 3036 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 LOC400499M0QZD8 3231 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 NBPF19A0A087WUL8 3843 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 ANKHD1Q8IWZ3 2542 aaKnown RBP0.65□□□□□ -2.31
CHD1-205ENST00000508756 IGSF10Q6WRI0 2623 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 AKAP13Q12802 2813 aa0.65□□□□□ -2.31
CHD1-205ENST00000508756 SMG1Q96Q15 3661 aaKnown RBP0.65□□□□□ -2.31
CHD1-205ENST00000508756 CFAP47Q6ZTR5 3102 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 MGAQ8IWI9 3026 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 SNRPGP62308 76 aaKnown RBP0.64□□□□□ -2.31
CHD1-205ENST00000508756 LINC01590Q5TEZ4 76 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 MINOS1Q5TGZ0 78 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 DEFB108BQ8NET1 73 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 SPTAN1Q13813 2472 aaKnown RBP0.64□□□□□ -2.31
CHD1-205ENST00000508756 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
CHD1-205ENST00000508756 FRYQ5TBA9 3013 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 CHD6Q8TD26 2715 aa0.64□□□□□ -2.31
CHD1-205ENST00000508756 RELNP78509 3460 aa0.63□□□□□ -2.31
CHD1-205ENST00000508756 ATMQ13315 3056 aa0.63□□□□□ -2.31
CHD1-205ENST00000508756 UBR5O95071 2799 aaPredicted RBP0.63□□□□□ -2.31
CHD1-205ENST00000508756 USP9YO00507 2555 aaPredicted RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms