RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
SNCA-209ENST00000506244 SMIM29Q86T20 159 aa9.5□□□□□ -0.89
SNCA-209ENST00000506244 Q8N377 158 aa9.49□□□□□ -0.89
SNCA-209ENST00000506244 PPDPFLQ8WWR9 84 aa9.49□□□□□ -0.89
SNCA-209ENST00000506244 CD164Q04900 197 aa9.48□□□□□ -0.89
SNCA-209ENST00000506244 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
SNCA-209ENST00000506244 OCIAD2Q56VL3 154 aa9.45□□□□□ -0.9
SNCA-209ENST00000506244 HRCT1Q6UXD1 115 aa9.44□□□□□ -0.9
SNCA-209ENST00000506244 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
SNCA-209ENST00000506244 A0A1B0GX51 115 aa9.43□□□□□ -0.9
SNCA-209ENST00000506244 GHRHP01286 108 aa9.43□□□□□ -0.9
SNCA-209ENST00000506244 Q6JHZ5 121 aa9.42□□□□□ -0.9
SNCA-209ENST00000506244 K7ERJ3 54 aa9.4□□□□□ -0.9
SNCA-209ENST00000506244 TRIAP1O43715 76 aa9.4□□□□□ -0.9
SNCA-209ENST00000506244 SNHG12Q9BXW3 62 aa9.4□□□□□ -0.9
SNCA-209ENST00000506244 IGLV8-61A0A075B6I0 122 aa9.39□□□□□ -0.91
SNCA-209ENST00000506244 COX6CP09669 75 aa9.39□□□□□ -0.91
SNCA-209ENST00000506244 PSMB2P49721 201 aa9.39□□□□□ -0.91
SNCA-209ENST00000506244 FAM218AQ96MZ4 157 aa9.39□□□□□ -0.91
SNCA-209ENST00000506244 Q5XG85 94 aa9.38□□□□□ -0.91
SNCA-209ENST00000506244 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
SNCA-209ENST00000506244 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
SNCA-209ENST00000506244 M0R143 59 aa9.35□□□□□ -0.91
SNCA-209ENST00000506244 DNAL4O96015 105 aa9.35□□□□□ -0.91
SNCA-209ENST00000506244 TCL1BO95988 128 aa9.34□□□□□ -0.91
SNCA-209ENST00000506244 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
SNCA-209ENST00000506244 A0A0G2JQZ4 141 aa9.33□□□□□ -0.92
SNCA-209ENST00000506244 TSTD3H0UI37 97 aa9.32□□□□□ -0.92
SNCA-209ENST00000506244 H3BQ85 93 aa9.32□□□□□ -0.92
SNCA-209ENST00000506244 IGFL1Q6UW32 110 aa9.32□□□□□ -0.92
SNCA-209ENST00000506244 NDUFV3P56181 108 aaKnown RBP9.3□□□□□ -0.92
SNCA-209ENST00000506244 H3BUT2 72 aa9.29□□□□□ -0.92
SNCA-209ENST00000506244 FABP2P12104 132 aa9.29□□□□□ -0.92
SNCA-209ENST00000506244 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
SNCA-209ENST00000506244 TRBV7-7A0A0K0K1E9 115 aa9.28□□□□□ -0.92
SNCA-209ENST00000506244 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
SNCA-209ENST00000506244 LOC105371267A0A1B0GV96 52 aa9.26□□□□□ -0.93
SNCA-209ENST00000506244 H3BMG7 143 aa9.25□□□□□ -0.93
SNCA-209ENST00000506244 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
SNCA-209ENST00000506244 TMEM256-PLSCR3K7ERE1 68 aa9.24□□□□□ -0.93
SNCA-209ENST00000506244 TRACP01848 142 aa9.24□□□□□ -0.93
SNCA-209ENST00000506244 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
SNCA-209ENST00000506244 Q6Q795 121 aa9.24□□□□□ -0.93
SNCA-209ENST00000506244 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
SNCA-209ENST00000506244 SS18L2Q9UHA2 77 aa9.23□□□□□ -0.93
SNCA-209ENST00000506244 LST1O00453 97 aa9.22□□□□□ -0.93
SNCA-209ENST00000506244 TEN1Q86WV5 123 aa9.22□□□□□ -0.93
SNCA-209ENST00000506244 A0A0U1RQV1 116 aa9.21□□□□□ -0.94
SNCA-209ENST00000506244 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
SNCA-209ENST00000506244 XP32Q5T750 250 aa9.2□□□□□ -0.94
SNCA-209ENST00000506244 UBE2V1Q13404 147 aa9.18□□□□□ -0.94
SNCA-209ENST00000506244 LYRM7Q5U5X0 104 aa9.18□□□□□ -0.94
SNCA-209ENST00000506244 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
SNCA-209ENST00000506244 MUC2Q02817 5179 aa9.16□□□□□ -0.94
SNCA-209ENST00000506244 ATXN8Q156A1 80 aa9.15□□□□□ -0.94
SNCA-209ENST00000506244 BATFQ16520 125 aa9.15□□□□□ -0.94
SNCA-209ENST00000506244 ANKRD29Q8N6D5 301 aa9.15□□□□□ -0.94
SNCA-209ENST00000506244 A0A087WSZ3 146 aa9.13□□□□□ -0.95
SNCA-209ENST00000506244 A0A1B0GV72 72 aa9.12□□□□□ -0.95
SNCA-209ENST00000506244 TRBV7-4A0A0J9YYF1 115 aa9.11□□□□□ -0.95
SNCA-209ENST00000506244 NAA38Q9BRA0 125 aaKnown RBP9.11□□□□□ -0.95
SNCA-209ENST00000506244 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
SNCA-209ENST00000506244 BAALC-AS2P0C853 105 aa9.09□□□□□ -0.95
SNCA-209ENST00000506244 TRBV20-1A0A075B6N2 111 aa9.08□□□□□ -0.96
SNCA-209ENST00000506244 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
SNCA-209ENST00000506244 DSCR8Q96T75 97 aa9.08□□□□□ -0.96
SNCA-209ENST00000506244 CCKP06307 115 aa9.07□□□□□ -0.96
SNCA-209ENST00000506244 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
SNCA-209ENST00000506244 JMJD7-PLA2G4BH0Y9G9 81 aa9.03□□□□□ -0.96
SNCA-209ENST00000506244 C9orf118A6NHY6 69 aa9.02□□□□□ -0.97
SNCA-209ENST00000506244 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
SNCA-209ENST00000506244 VPS25Q9BRG1 176 aa9.02□□□□□ -0.97
SNCA-209ENST00000506244 C9JAW5 83 aa9.01□□□□□ -0.97
SNCA-209ENST00000506244 OBSCN-AS1Q96MR7 158 aa9.01□□□□□ -0.97
SNCA-209ENST00000506244 Q96NJ1 140 aa9.01□□□□□ -0.97
SNCA-209ENST00000506244 SIGMAR1Q99720 223 aa9.01□□□□□ -0.97
SNCA-209ENST00000506244 PCOTHQ58A44 107 aa9□□□□□ -0.97
SNCA-209ENST00000506244 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
SNCA-209ENST00000506244 A0A1W2PPM0 123 aa8.98□□□□□ -0.97
SNCA-209ENST00000506244 PDE6GP18545 87 aa8.97□□□□□ -0.97
SNCA-209ENST00000506244 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
SNCA-209ENST00000506244 LOC110117498A0A087WWA1 95 aa8.95□□□□□ -0.98
SNCA-209ENST00000506244 Q75L30 129 aa8.95□□□□□ -0.98
SNCA-209ENST00000506244 KRTAP4-1Q9BYQ7 146 aa8.95□□□□□ -0.98
SNCA-209ENST00000506244 A0A1B0GW54 56 aa8.94□□□□□ -0.98
SNCA-209ENST00000506244 H3BT86 120 aa8.94□□□□□ -0.98
SNCA-209ENST00000506244 Q6ZQT0 140 aa8.93□□□□□ -0.98
SNCA-209ENST00000506244 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
SNCA-209ENST00000506244 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
SNCA-209ENST00000506244 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
SNCA-209ENST00000506244 C14orf132Q9NPU4 83 aa8.9□□□□□ -0.98
SNCA-209ENST00000506244 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.99
SNCA-209ENST00000506244 J3KT08 172 aa8.89□□□□□ -0.99
SNCA-209ENST00000506244 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
SNCA-209ENST00000506244 DSCR10P59022 87 aa8.87□□□□□ -0.99
SNCA-209ENST00000506244 LINC00313P59037 77 aa8.87□□□□□ -0.99
SNCA-209ENST00000506244 DEFB116Q30KQ4 102 aa8.87□□□□□ -0.99
SNCA-209ENST00000506244 C20orf166-AS1Q96NR2 134 aa8.87□□□□□ -0.99
SNCA-209ENST00000506244 A8MUU9 505 aa8.84□□□□□ -0.99
SNCA-209ENST00000506244 MTURNQ8N3F0 131 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms