RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PDE4DIPQ5VU43 2346 aa0.75□□□□□ -2.29
HMGB1P22-201ENST00000505315 S4R3F8 94 aa0.74□□□□□ -2.29
HMGB1P22-201ENST00000505315 TFF3Q07654 80 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 ABCA5Q8WWZ7 1642 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 ANKRD36CQ5JPF3 1778 aa0.73□□□□□ -2.29
HMGB1P22-201ENST00000505315 FBN3Q75N90 2809 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 SPTA1P02549 2419 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 WFDC10BQ8IUB3 73 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 KAAG1Q9UBP8 84 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 CDC42BPAQ5VT25 1732 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 TOGARAM1Q9Y4F4 1720 aa0.72□□□□□ -2.29
HMGB1P22-201ENST00000505315 APCP25054 2843 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 CRCT1Q9UGL9 99 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 FBN2P35556 2912 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 NRXN3Q9Y4C0 1643 aa0.71□□□□□ -2.3
HMGB1P22-201ENST00000505315 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP5-8O75690 187 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 IGF2RP11717 2491 aa0.7□□□□□ -2.3
HMGB1P22-201ENST00000505315 LINC01546A6NGU7 62 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 SMIM2Q9BVW6 85 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 PTPN13Q12923 2485 aa0.69□□□□□ -2.3
HMGB1P22-201ENST00000505315 TENM4Q6N022 2769 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 PRM1P04553 51 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 IQGAP2Q13576 1575 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 LMO7Q8WWI1 1683 aa0.68□□□□□ -2.3
HMGB1P22-201ENST00000505315 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 ATRQ13535 2644 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 KRTAP5-2Q701N4 177 aa0.67□□□□□ -2.3
HMGB1P22-201ENST00000505315 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
HMGB1P22-201ENST00000505315 NOP10Q9NPE3 64 aaKnown RBP0.66□□□□□ -2.3
HMGB1P22-201ENST00000505315 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
HMGB1P22-201ENST00000505315 NCOR1O75376 2440 aa0.65□□□□□ -2.31
HMGB1P22-201ENST00000505315 BPTFQ12830 3046 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 CHD8Q9HCK8 2581 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 REV3LO60673 3130 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 UNC79Q9P2D8 2635 aa0.64□□□□□ -2.31
HMGB1P22-201ENST00000505315 A0A1B0GUL6 1792 aa0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 ANK2Q01484 3957 aa0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P22-201ENST00000505315 VWFP04275 2813 aa0.62□□□□□ -2.31
HMGB1P22-201ENST00000505315 H3BNG1 76 aa0.62□□□□□ -2.31
HMGB1P22-201ENST00000505315 TRANK1O15050 2925 aa0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 KRTAP4-1Q9BYQ7 146 aa0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 FAM208AQ9UK61 1670 aaKnown RBP0.61□□□□□ -2.31
HMGB1P22-201ENST00000505315 HECTD1Q9ULT8 2610 aa0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 DDX60Q8IY21 1712 aaKnown RBP0.6□□□□□ -2.31
HMGB1P22-201ENST00000505315 IGLV5-48A0A075B6I7 105 aa0.59□□□□□ -2.31
HMGB1P22-201ENST00000505315 NDUFA1O15239 70 aa0.59□□□□□ -2.31
HMGB1P22-201ENST00000505315 KIF21BO75037 1637 aa0.59□□□□□ -2.32
HMGB1P22-201ENST00000505315 PCNX1Q96RV3 2341 aa0.58□□□□□ -2.32
HMGB1P22-201ENST00000505315 CREBBPQ92793 2442 aa0.58□□□□□ -2.32
HMGB1P22-201ENST00000505315 DSPP15924 2871 aaKnown RBP0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 ALMS1Q8TCU4 4167 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 OTOGQ6ZRI0 2925 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 DEFB131AP59861 70 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
HMGB1P22-201ENST00000505315 NFAT5O94916 1531 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 M0QY20 66 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 USP24Q9UPU5 2620 aa0.56□□□□□ -2.32
HMGB1P22-201ENST00000505315 TOP2AP11388 1531 aaKnown RBP0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 TNXBP22105 4242 aa0.55□□□□□ -2.32
HMGB1P22-201ENST00000505315 AKAP13Q12802 2813 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 PKD1L2Q7Z442 2459 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 SPRR2DP22532 72 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 HIVEP3Q5T1R4 2406 aa0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 MAP1BP46821 2468 aaKnown RBP0.54□□□□□ -2.32
HMGB1P22-201ENST00000505315 APC2O95996 2303 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 MMP24-AS1A0A0U1RRL7 71 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 UBR5O95071 2799 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 TRPM2O94759 1503 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 WNK1Q9H4A3 2382 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 CEP290O15078 2479 aa0.52□□□□□ -2.33
HMGB1P22-201ENST00000505315 FCGBPQ9Y6R7 5405 aaPredicted RBP0.51□□□□□ -2.33
HMGB1P22-201ENST00000505315 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
HMGB1P22-201ENST00000505315 ACANP16112 2415 aa0.5□□□□□ -2.33
HMGB1P22-201ENST00000505315 NBASA2RRP1 2371 aa0.49□□□□□ -2.33
HMGB1P22-201ENST00000505315 ATP7AQ04656 1500 aa0.48□□□□□ -2.33
HMGB1P22-201ENST00000505315 PKD1L1Q8TDX9 2849 aa0.48□□□□□ -2.33
HMGB1P22-201ENST00000505315 A8MTW9 85 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 SPRR2BP35325 72 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 FAT2Q9NYQ8 4349 aa0.47□□□□□ -2.33
HMGB1P22-201ENST00000505315 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 CLTCL1P53675 1640 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 SETXQ7Z333 2677 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 BSNQ9UPA5 3926 aa0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 HUWE1Q7Z6Z7 4374 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
HMGB1P22-201ENST00000505315 SAMD9LQ8IVG5 1584 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
HMGB1P22-201ENST00000505315 TNP1P09430 55 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms