RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 IGHV6-1A0A0B4J1U7 121 aa3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 PRKDCP78527 4128 aaKnown RBP3.77□□□□□ -1.81
SOX2-OT-218ENST00000498731 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
SOX2-OT-218ENST00000498731 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
SOX2-OT-218ENST00000498731 LCE6AA0A183 80 aa3.76□□□□□ -1.81
SOX2-OT-218ENST00000498731 DIRC1Q969H9 104 aa3.76□□□□□ -1.81
SOX2-OT-218ENST00000498731 A6NED7 52 aa3.75□□□□□ -1.81
SOX2-OT-218ENST00000498731 HIGD2BQ4VC39 106 aa3.75□□□□□ -1.81
SOX2-OT-218ENST00000498731 IGKV2D-24A0A075B6R9 120 aa3.75□□□□□ -1.81
SOX2-OT-218ENST00000498731 SPINK7P58062 85 aa3.75□□□□□ -1.81
SOX2-OT-218ENST00000498731 WFDC10BQ8IUB3 73 aa3.74□□□□□ -1.81
SOX2-OT-218ENST00000498731 XAGE1AQ9HD64 81 aa3.74□□□□□ -1.81
SOX2-OT-218ENST00000498731 K7EQZ3 153 aa3.74□□□□□ -1.81
SOX2-OT-218ENST00000498731 C7orf65Q6ZTY9 151 aa3.74□□□□□ -1.81
SOX2-OT-218ENST00000498731 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 UBE2AP49459 152 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 WWC2-AS2Q96NR7 200 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 UNQ6190/PRO20217Q6UXQ8 127 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 ATP11AUNQ6ZP68 121 aa3.73□□□□□ -1.81
SOX2-OT-218ENST00000498731 SPAG11BQ08648 103 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 DEFB105AQ8NG35 78 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 DSCR10P59022 87 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 LELP1Q5T871 98 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 COX7BP24311 80 aa3.72□□□□□ -1.81
SOX2-OT-218ENST00000498731 K7EIL1 84 aa3.71□□□□□ -1.82
SOX2-OT-218ENST00000498731 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
SOX2-OT-218ENST00000498731 UBE2DNLQ8IWF7 75 aa3.71□□□□□ -1.82
SOX2-OT-218ENST00000498731 B9D2Q9BPU9 175 aa3.71□□□□□ -1.82
SOX2-OT-218ENST00000498731 LYSTQ99698 3801 aa3.7□□□□□ -1.82
SOX2-OT-218ENST00000498731 PDE6GP18545 87 aa3.7□□□□□ -1.82
SOX2-OT-218ENST00000498731 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
SOX2-OT-218ENST00000498731 CAMK2N2Q96S95 79 aa3.7□□□□□ -1.82
SOX2-OT-218ENST00000498731 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 WFDC13Q8IUB5 93 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 A0A1B0GUV1 79 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 RPL37AP8A6NKH3 93 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 Q8IZM0 81 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 LINC00208Q96KT6 92 aa3.69□□□□□ -1.82
SOX2-OT-218ENST00000498731 ETDCA0A1B0GVM5 59 aa3.68□□□□□ -1.82
SOX2-OT-218ENST00000498731 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
SOX2-OT-218ENST00000498731 CMYA5Q8N3K9 4069 aa3.68□□□□□ -1.82
SOX2-OT-218ENST00000498731 EGFEM1PQ0D2K5 195 aa3.68□□□□□ -1.82
SOX2-OT-218ENST00000498731 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
SOX2-OT-218ENST00000498731 LINC01554Q52M75 96 aa3.67□□□□□ -1.82
SOX2-OT-218ENST00000498731 NKAPP1Q8N9T2 125 aa3.67□□□□□ -1.82
SOX2-OT-218ENST00000498731 ELOF1P60002 83 aaKnown RBP3.66□□□□□ -1.82
SOX2-OT-218ENST00000498731 Q8N377 158 aa3.66□□□□□ -1.82
SOX2-OT-218ENST00000498731 IGLV5-52A0A0A0MRZ9 124 aa3.66□□□□□ -1.82
SOX2-OT-218ENST00000498731 COA5Q86WW8 74 aa3.66□□□□□ -1.82
SOX2-OT-218ENST00000498731 LOC101927531A0A1B0GV80 90 aa3.65□□□□□ -1.82
SOX2-OT-218ENST00000498731 LIMD2Q9BT23 127 aa3.65□□□□□ -1.82
SOX2-OT-218ENST00000498731 KMT2CQ8NEZ4 4911 aaKnown RBP3.65□□□□□ -1.82
SOX2-OT-218ENST00000498731 DNAH10Q8IVF4 4471 aa3.65□□□□□ -1.83
SOX2-OT-218ENST00000498731 C7orf33Q8WU49 177 aa3.65□□□□□ -1.83
SOX2-OT-218ENST00000498731 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
SOX2-OT-218ENST00000498731 IGKV2-24A0A0C4DH68 120 aa3.64□□□□□ -1.83
SOX2-OT-218ENST00000498731 C6orf48Q9UBA6 75 aa3.64□□□□□ -1.83
SOX2-OT-218ENST00000498731 IGLV1-50A0A075B6I6 118 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 CASC10Q5T4H9 136 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 LINC00476Q8WZB0 136 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
SOX2-OT-218ENST00000498731 PLAC8Q9NZF1 115 aa3.62□□□□□ -1.83
SOX2-OT-218ENST00000498731 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-218ENST00000498731 COX17Q14061 63 aa3.62□□□□□ -1.83
SOX2-OT-218ENST00000498731 Q6ZR54 194 aa3.62□□□□□ -1.83
SOX2-OT-218ENST00000498731 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 KCNQ1DNQ9H478 68 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 LINC01556Q5JQF7 62 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 H0Y9P7 68 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 LY6G6CO95867 125 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 DHRS4-AS1Q9P1J3 65 aa3.61□□□□□ -1.83
SOX2-OT-218ENST00000498731 CSAG1Q6PB30 78 aa3.6□□□□□ -1.83
SOX2-OT-218ENST00000498731 Q9BRP9 147 aa3.6□□□□□ -1.83
SOX2-OT-218ENST00000498731 H3BNG1 76 aa3.6□□□□□ -1.83
SOX2-OT-218ENST00000498731 IGLV5-48A0A075B6I7 105 aa3.59□□□□□ -1.83
SOX2-OT-218ENST00000498731 C1orf137Q5JT78 98 aa3.59□□□□□ -1.83
SOX2-OT-218ENST00000498731 FLG2Q5D862 2391 aaPredicted RBP3.59□□□□□ -1.83
SOX2-OT-218ENST00000498731 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
SOX2-OT-218ENST00000498731 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
SOX2-OT-218ENST00000498731 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
SOX2-OT-218ENST00000498731 DNAH10OSP0CZ25 163 aa3.58□□□□□ -1.84
SOX2-OT-218ENST00000498731 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
SOX2-OT-218ENST00000498731 IGLV5-37A0A075B6J1 123 aa3.57□□□□□ -1.84
SOX2-OT-218ENST00000498731 FAM168BA1KXE4 195 aa3.57□□□□□ -1.84
SOX2-OT-218ENST00000498731 Q8NBF4 154 aa3.57□□□□□ -1.84
SOX2-OT-218ENST00000498731 HRES1P13985 223 aa3.57□□□□□ -1.84
SOX2-OT-218ENST00000498731 RTL8CO15255 209 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 CNBPP62633 177 aaKnown RBP3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 DNAH9Q9NYC9 4486 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 RYR3Q15413 4870 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 NDUFB1O75438 58 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 DNAH1Q9P2D7 4330 aa3.56□□□□□ -1.84
SOX2-OT-218ENST00000498731 SPANXA2-OT1Q8N9U9 137 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms