RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 Q8N1X5 172 aa5.73□□□□□ -1.49
FN1-227ENST00000498719 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 LINC01556Q5JQF7 62 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 STAB2Q8WWQ8 2551 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 DNAH10Q8IVF4 4471 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 TRBV7-4A0A0J9YYF1 115 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
FN1-227ENST00000498719 HUWE1Q7Z6Z7 4374 aaKnown RBP5.71□□□□□ -1.5
FN1-227ENST00000498719 RMI2Q96E14 147 aa5.7□□□□□ -1.5
FN1-227ENST00000498719 FAM168BA1KXE4 195 aa5.69□□□□□ -1.5
FN1-227ENST00000498719 TLX1NBP0CAT3 122 aa5.69□□□□□ -1.5
FN1-227ENST00000498719 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
FN1-227ENST00000498719 A8MWP4 228 aa5.69□□□□□ -1.5
FN1-227ENST00000498719 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
FN1-227ENST00000498719 A0A1B0GVX0 72 aa5.68□□□□□ -1.5
FN1-227ENST00000498719 A6NED7 52 aa5.68□□□□□ -1.5
FN1-227ENST00000498719 PDE6GP18545 87 aa5.68□□□□□ -1.5
FN1-227ENST00000498719 CIRBP-AS1Q8TBR5 109 aa5.68□□□□□ -1.5
FN1-227ENST00000498719 SRRM2Q9UQ35 2752 aaKnown RBP5.68□□□□□ -1.5
FN1-227ENST00000498719 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
FN1-227ENST00000498719 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
FN1-227ENST00000498719 H3BQ85 93 aa5.67□□□□□ -1.5
FN1-227ENST00000498719 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
FN1-227ENST00000498719 Q8N9L7 120 aa5.66□□□□□ -1.5
FN1-227ENST00000498719 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
FN1-227ENST00000498719 DNAH9Q9NYC9 4486 aa5.66□□□□□ -1.5
FN1-227ENST00000498719 C3orf84H3BNL1 204 aa5.66□□□□□ -1.5
FN1-227ENST00000498719 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.5
FN1-227ENST00000498719 Q8N377 158 aa5.65□□□□□ -1.5
FN1-227ENST00000498719 UBE2AP49459 152 aa5.65□□□□□ -1.51
FN1-227ENST00000498719 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.51
FN1-227ENST00000498719 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.51
FN1-227ENST00000498719 Q9BRP9 147 aa5.64□□□□□ -1.51
FN1-227ENST00000498719 ST20-AS1Q8NBB2 130 aa5.63□□□□□ -1.51
FN1-227ENST00000498719 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
FN1-227ENST00000498719 A0A1B0GW54 56 aa5.63□□□□□ -1.51
FN1-227ENST00000498719 A6NN06 94 aa5.63□□□□□ -1.51
FN1-227ENST00000498719 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
FN1-227ENST00000498719 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
FN1-227ENST00000498719 Q6ZRX8 168 aa5.62□□□□□ -1.51
FN1-227ENST00000498719 BPY2O14599 106 aa5.62□□□□□ -1.51
FN1-227ENST00000498719 ERC2-IT1O76042 136 aa5.6□□□□□ -1.51
FN1-227ENST00000498719 NREPQ16612 68 aa5.6□□□□□ -1.51
FN1-227ENST00000498719 IGLV7-46A0A075B6I9 117 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 H7BZZ5 65 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 K7EIL1 84 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
FN1-227ENST00000498719 A0A1W2PNM2 257 aa5.58□□□□□ -1.52
FN1-227ENST00000498719 K7ERS5 55 aa5.58□□□□□ -1.52
FN1-227ENST00000498719 SPRR1AP35321 89 aa5.58□□□□□ -1.52
FN1-227ENST00000498719 KRTAP1-5Q9BYS1 174 aa5.58□□□□□ -1.52
FN1-227ENST00000498719 A0A0G2JQZ4 141 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 A0A1W2PNN7 141 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 BCE1O60756 84 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 FAM229BQ4G0N7 80 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 KLKP1Q107X0 134 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 C1orf137Q5JT78 98 aa5.57□□□□□ -1.52
FN1-227ENST00000498719 IGKV2-24A0A0C4DH68 120 aa5.56□□□□□ -1.52
FN1-227ENST00000498719 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
FN1-227ENST00000498719 F8WEM9 126 aa5.55□□□□□ -1.52
FN1-227ENST00000498719 A0A096LNI7 61 aa5.55□□□□□ -1.52
FN1-227ENST00000498719 C1orf64Q8NEQ6 169 aa5.55□□□□□ -1.52
FN1-227ENST00000498719 PRLHP81277 87 aa5.54□□□□□ -1.52
FN1-227ENST00000498719 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.53□□□□□ -1.52
FN1-227ENST00000498719 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
FN1-227ENST00000498719 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
FN1-227ENST00000498719 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
FN1-227ENST00000498719 PSCAO43653 123 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 SPRR4Q96PI1 79 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 LINC00474Q9P2X8 69 aa5.5□□□□□ -1.53
FN1-227ENST00000498719 A8MUU9 505 aa5.49□□□□□ -1.53
FN1-227ENST00000498719 C16orf90A8MZG2 172 aa5.49□□□□□ -1.53
FN1-227ENST00000498719 K7EQZ3 153 aa5.49□□□□□ -1.53
FN1-227ENST00000498719 DSCR10P59022 87 aa5.49□□□□□ -1.53
FN1-227ENST00000498719 DYNC2H1Q8NCM8 4307 aaKnown RBP5.49□□□□□ -1.53
FN1-227ENST00000498719 IGFL1Q6UW32 110 aa5.48□□□□□ -1.53
FN1-227ENST00000498719 UBE2DNLQ8IWF7 75 aa5.48□□□□□ -1.53
FN1-227ENST00000498719 CNBPP62633 177 aaKnown RBP5.47□□□□□ -1.53
FN1-227ENST00000498719 NDUFC1O43677 76 aa5.46□□□□□ -1.54
FN1-227ENST00000498719 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
FN1-227ENST00000498719 A0A087WSZ3 146 aa5.45□□□□□ -1.54
FN1-227ENST00000498719 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
FN1-227ENST00000498719 PRKDCP78527 4128 aaKnown RBP5.44□□□□□ -1.54
FN1-227ENST00000498719 PANO1I0J062 215 aa5.44□□□□□ -1.54
FN1-227ENST00000498719 ROMO1P60602 79 aa5.44□□□□□ -1.54
FN1-227ENST00000498719 C1orf134Q5TEV5 83 aa5.44□□□□□ -1.54
FN1-227ENST00000498719 TGP01266 2768 aa5.43□□□□□ -1.54
FN1-227ENST00000498719 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
FN1-227ENST00000498719 FRAS1Q86XX4 4008 aa5.43□□□□□ -1.54
FN1-227ENST00000498719 KMT2AQ03164 3969 aa5.43□□□□□ -1.54
FN1-227ENST00000498719 HECTD4Q9Y4D8 3996 aa5.43□□□□□ -1.54
FN1-227ENST00000498719 LRCOL1A6NCL2 159 aa5.41□□□□□ -1.54
FN1-227ENST00000498719 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
FN1-227ENST00000498719 WFDC13Q8IUB5 93 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms