RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 KRTAP1-5Q9BYS1 174 aa12.45□□□□□ -0.42
NKX2-1-202ENST00000498187 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.45□□□□□ -0.42
NKX2-1-202ENST00000498187 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
NKX2-1-202ENST00000498187 IGFL1Q6UW32 110 aa12.43□□□□□ -0.42
NKX2-1-202ENST00000498187 C16orf90A8MZG2 172 aa12.42□□□□□ -0.42
NKX2-1-202ENST00000498187 PRLHP81277 87 aa12.42□□□□□ -0.42
NKX2-1-202ENST00000498187 C1orf64Q8NEQ6 169 aa12.42□□□□□ -0.42
NKX2-1-202ENST00000498187 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
NKX2-1-202ENST00000498187 A0A0G2JQZ4 141 aa12.4□□□□□ -0.42
NKX2-1-202ENST00000498187 C1orf195Q5TG92 126 aa12.39□□□□□ -0.43
NKX2-1-202ENST00000498187 IGLV8-61A0A075B6I0 122 aa12.39□□□□□ -0.43
NKX2-1-202ENST00000498187 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
NKX2-1-202ENST00000498187 NDUFB1O75438 58 aa12.38□□□□□ -0.43
NKX2-1-202ENST00000498187 CYP4F30PQ9H0H9 118 aa12.37□□□□□ -0.43
NKX2-1-202ENST00000498187 A0A087WSZ3 146 aa12.36□□□□□ -0.43
NKX2-1-202ENST00000498187 Q1T7F1 81 aa12.36□□□□□ -0.43
NKX2-1-202ENST00000498187 DEFB116Q30KQ4 102 aa12.36□□□□□ -0.43
NKX2-1-202ENST00000498187 MP68P56378 58 aa12.35□□□□□ -0.43
NKX2-1-202ENST00000498187 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
NKX2-1-202ENST00000498187 WFDC13Q8IUB5 93 aa12.34□□□□□ -0.43
NKX2-1-202ENST00000498187 UBE2DNLQ8IWF7 75 aa12.33□□□□□ -0.44
NKX2-1-202ENST00000498187 LRCOL1A6NCL2 159 aa12.33□□□□□ -0.44
NKX2-1-202ENST00000498187 UBE2AP49459 152 aa12.31□□□□□ -0.44
NKX2-1-202ENST00000498187 CHTF8P0CG12 524 aa12.3□□□□□ -0.44
NKX2-1-202ENST00000498187 LYSTQ99698 3801 aa12.3□□□□□ -0.44
NKX2-1-202ENST00000498187 PHF5AQ7RTV0 110 aaKnown RBP12.29□□□□□ -0.44
NKX2-1-202ENST00000498187 KRTAP11-1Q8IUC1 163 aa12.29□□□□□ -0.44
NKX2-1-202ENST00000498187 DNAH9Q9NYC9 4486 aa12.28□□□□□ -0.44
NKX2-1-202ENST00000498187 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
NKX2-1-202ENST00000498187 TRAV22A0A0B4J277 110 aa12.27□□□□□ -0.44
NKX2-1-202ENST00000498187 PRR4Q16378 134 aa12.27□□□□□ -0.44
NKX2-1-202ENST00000498187 KRTAP29-1A8MX34 341 aaPredicted RBP12.27□□□□□ -0.45
NKX2-1-202ENST00000498187 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
NKX2-1-202ENST00000498187 C14orf177Q52M58 125 aa12.26□□□□□ -0.45
NKX2-1-202ENST00000498187 LINC00208Q96KT6 92 aa12.25□□□□□ -0.45
NKX2-1-202ENST00000498187 H3BPC8 53 aa12.23□□□□□ -0.45
NKX2-1-202ENST00000498187 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
NKX2-1-202ENST00000498187 STAB2Q8WWQ8 2551 aa12.23□□□□□ -0.45
NKX2-1-202ENST00000498187 PRR15Q8IV56 129 aa12.23□□□□□ -0.45
NKX2-1-202ENST00000498187 SPRR1BP22528 89 aa12.22□□□□□ -0.45
NKX2-1-202ENST00000498187 H0Y9J4 135 aa12.21□□□□□ -0.45
NKX2-1-202ENST00000498187 B9D2Q9BPU9 175 aa12.21□□□□□ -0.46
NKX2-1-202ENST00000498187 COL7A1Q02388 2944 aa12.2□□□□□ -0.46
NKX2-1-202ENST00000498187 A8MWP4 228 aa12.2□□□□□ -0.46
NKX2-1-202ENST00000498187 H0Y9P7 68 aa12.2□□□□□ -0.46
NKX2-1-202ENST00000498187 SPANXA2-OT1Q8N9U9 137 aa12.2□□□□□ -0.46
NKX2-1-202ENST00000498187 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
NKX2-1-202ENST00000498187 LINC00472Q9H8W2 130 aa12.18□□□□□ -0.46
NKX2-1-202ENST00000498187 PSPHP1O15172 72 aa12.17□□□□□ -0.46
NKX2-1-202ENST00000498187 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
NKX2-1-202ENST00000498187 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
NKX2-1-202ENST00000498187 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
NKX2-1-202ENST00000498187 NBDYA0A0U1RRE5 68 aa12.12□□□□□ -0.47
NKX2-1-202ENST00000498187 PANO1I0J062 215 aa12.11□□□□□ -0.47
NKX2-1-202ENST00000498187 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
NKX2-1-202ENST00000498187 DNAH7Q8WXX0 4024 aa12.09□□□□□ -0.47
NKX2-1-202ENST00000498187 DYNC2H1Q8NCM8 4307 aaKnown RBP12.09□□□□□ -0.47
NKX2-1-202ENST00000498187 Q6ZRN7 208 aaPredicted RBP12.07□□□□□ -0.48
NKX2-1-202ENST00000498187 A8MUN3 132 aa12.06□□□□□ -0.48
NKX2-1-202ENST00000498187 NUPR2A6NF83 97 aa12.05□□□□□ -0.48
NKX2-1-202ENST00000498187 KRTAP13-1Q8IUC0 172 aa12.05□□□□□ -0.48
NKX2-1-202ENST00000498187 C4orf48Q5BLP8 95 aa12.05□□□□□ -0.48
NKX2-1-202ENST00000498187 CSMD3Q7Z407 3707 aa12.04□□□□□ -0.48
NKX2-1-202ENST00000498187 MMP24-AS1A0A0U1RRL7 71 aa12.04□□□□□ -0.48
NKX2-1-202ENST00000498187 TENM2Q9NT68 2774 aa12.04□□□□□ -0.48
NKX2-1-202ENST00000498187 PMAIP1Q13794 54 aa12.03□□□□□ -0.48
NKX2-1-202ENST00000498187 LIMD2Q9BT23 127 aa12.03□□□□□ -0.48
NKX2-1-202ENST00000498187 Q8N9P0 234 aaPredicted RBP12.01□□□□□ -0.49
NKX2-1-202ENST00000498187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
NKX2-1-202ENST00000498187 PLECQ15149 4684 aaKnown RBP12.01□□□□□ -0.49
NKX2-1-202ENST00000498187 Q5VV11 94 aa12□□□□□ -0.49
NKX2-1-202ENST00000498187 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
NKX2-1-202ENST00000498187 CD164Q04900 197 aa11.98□□□□□ -0.49
NKX2-1-202ENST00000498187 IGLV7-46A0A075B6I9 117 aa11.98□□□□□ -0.49
NKX2-1-202ENST00000498187 TP53AIP1Q9HCN2 124 aa11.97□□□□□ -0.49
NKX2-1-202ENST00000498187 IGLV9-49A0A0B4J1Y8 123 aa11.96□□□□□ -0.49
NKX2-1-202ENST00000498187 MOBPQ13875 183 aa11.94□□□□□ -0.5
NKX2-1-202ENST00000498187 FBN3Q75N90 2809 aa11.93□□□□□ -0.5
NKX2-1-202ENST00000498187 ASB16-AS1Q495Z4 193 aa11.93□□□□□ -0.5
NKX2-1-202ENST00000498187 COA5Q86WW8 74 aa11.93□□□□□ -0.5
NKX2-1-202ENST00000498187 Q96NJ1 140 aa11.93□□□□□ -0.5
NKX2-1-202ENST00000498187 CHKB-CPT1BH3BT56 60 aa11.92□□□□□ -0.5
NKX2-1-202ENST00000498187 PRR15LQ9BU68 103 aa11.91□□□□□ -0.5
NKX2-1-202ENST00000498187 A0A087WTM6 91 aa11.91□□□□□ -0.5
NKX2-1-202ENST00000498187 C8orf17Q9NRJ1 99 aa11.89□□□□□ -0.51
NKX2-1-202ENST00000498187 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
NKX2-1-202ENST00000498187 TGP01266 2768 aa11.88□□□□□ -0.51
NKX2-1-202ENST00000498187 PCOTHQ58A44 107 aa11.87□□□□□ -0.51
NKX2-1-202ENST00000498187 Q6ZR54 194 aa11.87□□□□□ -0.51
NKX2-1-202ENST00000498187 RTL8CO15255 209 aa11.85□□□□□ -0.51
NKX2-1-202ENST00000498187 LOC101927531A0A1B0GV80 90 aa11.84□□□□□ -0.51
NKX2-1-202ENST00000498187 Q75L30 129 aa11.84□□□□□ -0.51
NKX2-1-202ENST00000498187 PSORS1C2Q9UIG4 136 aa11.84□□□□□ -0.51
NKX2-1-202ENST00000498187 STARD9Q9P2P6 4700 aa11.83□□□□□ -0.52
NKX2-1-202ENST00000498187 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
NKX2-1-202ENST00000498187 ZNF706Q9Y5V0 76 aaPredicted RBP11.83□□□□□ -0.52
NKX2-1-202ENST00000498187 VPS13DQ5THJ4 4388 aa11.83□□□□□ -0.52
NKX2-1-202ENST00000498187 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
NKX2-1-202ENST00000498187 IGHV6-1A0A0B4J1U7 121 aa11.82□□□□□ -0.52
NKX2-1-202ENST00000498187 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms