RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 VAMP3Q15836 100 aa6.46□□□□□ -1.38
MDC1-207ENST00000492462 C14orf144Q96I85 54 aa6.46□□□□□ -1.38
MDC1-207ENST00000492462 C9orf92A6NGG3 77 aa6.45□□□□□ -1.38
MDC1-207ENST00000492462 Q6ZQY7 126 aa6.45□□□□□ -1.38
MDC1-207ENST00000492462 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
MDC1-207ENST00000492462 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
MDC1-207ENST00000492462 DLEU1O43261 78 aa6.44□□□□□ -1.38
MDC1-207ENST00000492462 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
MDC1-207ENST00000492462 C1orf195Q5TG92 126 aa6.43□□□□□ -1.38
MDC1-207ENST00000492462 Q5XG85 94 aa6.43□□□□□ -1.38
MDC1-207ENST00000492462 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
MDC1-207ENST00000492462 CFC1BP0CG36 223 aa6.41□□□□□ -1.38
MDC1-207ENST00000492462 CFC1P0CG37 223 aa6.41□□□□□ -1.38
MDC1-207ENST00000492462 F8WEM9 126 aa6.4□□□□□ -1.38
MDC1-207ENST00000492462 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
MDC1-207ENST00000492462 HIGD1BQ9P298 99 aa6.4□□□□□ -1.38
MDC1-207ENST00000492462 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
MDC1-207ENST00000492462 IGFL1Q6UW32 110 aa6.39□□□□□ -1.39
MDC1-207ENST00000492462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
MDC1-207ENST00000492462 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
MDC1-207ENST00000492462 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
MDC1-207ENST00000492462 BVES-AS1Q5T3Y7 98 aa6.38□□□□□ -1.39
MDC1-207ENST00000492462 RAB37Q96AX2 223 aa6.37□□□□□ -1.39
MDC1-207ENST00000492462 FAM218AQ96MZ4 157 aa6.37□□□□□ -1.39
MDC1-207ENST00000492462 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
MDC1-207ENST00000492462 H3BUT2 72 aa6.36□□□□□ -1.39
MDC1-207ENST00000492462 Q6JHZ5 121 aa6.36□□□□□ -1.39
MDC1-207ENST00000492462 CLEC2BQ92478 149 aa6.36□□□□□ -1.39
MDC1-207ENST00000492462 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
MDC1-207ENST00000492462 TCL1BO95988 128 aa6.35□□□□□ -1.39
MDC1-207ENST00000492462 CEND1Q8N111 149 aa6.35□□□□□ -1.39
MDC1-207ENST00000492462 FXYD2P54710 66 aa6.34□□□□□ -1.39
MDC1-207ENST00000492462 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
MDC1-207ENST00000492462 SNHG12Q9BXW3 62 aa6.34□□□□□ -1.39
MDC1-207ENST00000492462 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
MDC1-207ENST00000492462 PYY3Q5JQD4 70 aa6.33□□□□□ -1.4
MDC1-207ENST00000492462 PPDPFLQ8WWR9 84 aa6.33□□□□□ -1.4
MDC1-207ENST00000492462 H0YGX0 51 aa6.31□□□□□ -1.4
MDC1-207ENST00000492462 PRO1854Q9UHT4 67 aa6.31□□□□□ -1.4
MDC1-207ENST00000492462 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
MDC1-207ENST00000492462 NDUFV3P56181 108 aaKnown RBP6.29□□□□□ -1.4
MDC1-207ENST00000492462 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
MDC1-207ENST00000492462 K7ERJ3 54 aa6.28□□□□□ -1.4
MDC1-207ENST00000492462 TRIAP1O43715 76 aa6.28□□□□□ -1.4
MDC1-207ENST00000492462 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
MDC1-207ENST00000492462 A6NJY4 79 aa6.27□□□□□ -1.41
MDC1-207ENST00000492462 HSD52Q0P140 79 aa6.26□□□□□ -1.41
MDC1-207ENST00000492462 SNCGO76070 127 aa6.25□□□□□ -1.41
MDC1-207ENST00000492462 FABP2P12104 132 aa6.25□□□□□ -1.41
MDC1-207ENST00000492462 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
MDC1-207ENST00000492462 A0A1B0GX51 115 aa6.24□□□□□ -1.41
MDC1-207ENST00000492462 H3BMG7 143 aa6.24□□□□□ -1.41
MDC1-207ENST00000492462 LST1O00453 97 aa6.24□□□□□ -1.41
MDC1-207ENST00000492462 Q6Q795 121 aa6.24□□□□□ -1.41
MDC1-207ENST00000492462 SMCPP49901 116 aaPredicted RBP6.23□□□□□ -1.41
MDC1-207ENST00000492462 MT1HP80294 61 aa6.23□□□□□ -1.41
MDC1-207ENST00000492462 TEN1Q86WV5 123 aa6.23□□□□□ -1.41
MDC1-207ENST00000492462 A0A087WSZ3 146 aa6.22□□□□□ -1.41
MDC1-207ENST00000492462 A0A1B0GV72 72 aa6.21□□□□□ -1.42
MDC1-207ENST00000492462 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
MDC1-207ENST00000492462 PSMB2P49721 201 aa6.21□□□□□ -1.42
MDC1-207ENST00000492462 Q96NJ1 140 aa6.21□□□□□ -1.42
MDC1-207ENST00000492462 UQCR10Q9UDW1 63 aa6.21□□□□□ -1.42
MDC1-207ENST00000492462 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
MDC1-207ENST00000492462 Q75L30 129 aa6.18□□□□□ -1.42
MDC1-207ENST00000492462 ORMDL1Q9P0S3 153 aa6.18□□□□□ -1.42
MDC1-207ENST00000492462 DNAL4O96015 105 aa6.17□□□□□ -1.42
MDC1-207ENST00000492462 GHRHP01286 108 aa6.17□□□□□ -1.42
MDC1-207ENST00000492462 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
MDC1-207ENST00000492462 ANKRD29Q8N6D5 301 aa6.16□□□□□ -1.42
MDC1-207ENST00000492462 SYNE2Q8WXH0 6885 aaKnown RBP6.16□□□□□ -1.42
MDC1-207ENST00000492462 COX6CP09669 75 aa6.15□□□□□ -1.42
MDC1-207ENST00000492462 ATP11AUNQ6ZP68 121 aa6.15□□□□□ -1.42
MDC1-207ENST00000492462 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
MDC1-207ENST00000492462 DSCR10P59022 87 aa6.14□□□□□ -1.43
MDC1-207ENST00000492462 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
MDC1-207ENST00000492462 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
MDC1-207ENST00000492462 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
MDC1-207ENST00000492462 TRBV7-4A0A0J9YYF1 115 aa6.12□□□□□ -1.43
MDC1-207ENST00000492462 A8MUU9 505 aa6.12□□□□□ -1.43
MDC1-207ENST00000492462 TMEM256-PLSCR3K7ERE1 68 aa6.12□□□□□ -1.43
MDC1-207ENST00000492462 LCE2BO14633 110 aa6.12□□□□□ -1.43
MDC1-207ENST00000492462 H3BQ85 93 aa6.11□□□□□ -1.43
MDC1-207ENST00000492462 TRACP01848 142 aa6.11□□□□□ -1.43
MDC1-207ENST00000492462 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
MDC1-207ENST00000492462 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
MDC1-207ENST00000492462 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
MDC1-207ENST00000492462 CCKP06307 115 aa6.1□□□□□ -1.43
MDC1-207ENST00000492462 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
MDC1-207ENST00000492462 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
MDC1-207ENST00000492462 UBE2V1Q13404 147 aa6.1□□□□□ -1.43
MDC1-207ENST00000492462 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
MDC1-207ENST00000492462 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
MDC1-207ENST00000492462 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
MDC1-207ENST00000492462 M0R2T5 61 aa6.08□□□□□ -1.44
MDC1-207ENST00000492462 NAA38Q9BRA0 125 aaKnown RBP6.08□□□□□ -1.44
MDC1-207ENST00000492462 USH2AO75445 5202 aa6.07□□□□□ -1.44
MDC1-207ENST00000492462 VPS25Q9BRG1 176 aa6.07□□□□□ -1.44
MDC1-207ENST00000492462 BAALC-AS2P0C853 105 aa6.06□□□□□ -1.44
MDC1-207ENST00000492462 LINC00313P59037 77 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms