RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PSPHP1O15172 72 aa5.55□□□□□ -1.52
HDAC3-212ENST00000492407 UBE2AP49459 152 aa5.55□□□□□ -1.52
HDAC3-212ENST00000492407 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
HDAC3-212ENST00000492407 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
HDAC3-212ENST00000492407 C2orf82Q6UX34 121 aa5.55□□□□□ -1.52
HDAC3-212ENST00000492407 TRBV30A0A0K0K1B3 111 aa5.54□□□□□ -1.52
HDAC3-212ENST00000492407 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
HDAC3-212ENST00000492407 PRO1854Q9UHT4 67 aa5.54□□□□□ -1.52
HDAC3-212ENST00000492407 D6R8Y8 96 aa5.53□□□□□ -1.52
HDAC3-212ENST00000492407 LINC00313P59037 77 aa5.53□□□□□ -1.52
HDAC3-212ENST00000492407 ATP5EP2Q5VTU8 51 aa5.53□□□□□ -1.52
HDAC3-212ENST00000492407 UNQ6190/PRO20217Q6UXQ8 127 aa5.53□□□□□ -1.52
HDAC3-212ENST00000492407 C6orf48Q9UBA6 75 aa5.53□□□□□ -1.52
HDAC3-212ENST00000492407 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
HDAC3-212ENST00000492407 TRBV10-3A0A0K0K1G6 114 aa5.52□□□□□ -1.53
HDAC3-212ENST00000492407 C10orf25Q5T742 122 aa5.52□□□□□ -1.53
HDAC3-212ENST00000492407 ORMDL3Q8N138 153 aa5.52□□□□□ -1.53
HDAC3-212ENST00000492407 ASB16-AS1Q495Z4 193 aa5.51□□□□□ -1.53
HDAC3-212ENST00000492407 LINC00242Q5T6M2 205 aa5.51□□□□□ -1.53
HDAC3-212ENST00000492407 TMEM141Q96I45 108 aa5.51□□□□□ -1.53
HDAC3-212ENST00000492407 FAM168BA1KXE4 195 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 LINC01546A6NGU7 62 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 K7EMI3 77 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 ZNF22P17026 224 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-212ENST00000492407 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
HDAC3-212ENST00000492407 IGLV4-3A0A075B6K6 122 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 A6NN06 94 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 CFC1P0CG37 223 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 KRTAP11-1Q8IUC1 163 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 KRTAP7-1Q8IUC3 87 aa5.49□□□□□ -1.53
HDAC3-212ENST00000492407 IGKV2D-26A0A0A0MRZ7 120 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 ZNF861PO60384 105 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 COX6CP09669 75 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 PLNP26678 52 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 C6orf99Q4VX62 202 aa5.48□□□□□ -1.53
HDAC3-212ENST00000492407 PRSS2P07478 247 aa5.47□□□□□ -1.53
HDAC3-212ENST00000492407 C9orf129Q5T035 196 aaKnown RBP5.47□□□□□ -1.53
HDAC3-212ENST00000492407 Q8IZM0 81 aa5.47□□□□□ -1.53
HDAC3-212ENST00000492407 C20orf197Q8N268 126 aa5.47□□□□□ -1.53
HDAC3-212ENST00000492407 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
HDAC3-212ENST00000492407 AMELXQ99217 191 aa5.47□□□□□ -1.53
HDAC3-212ENST00000492407 A0A096LNJ9 63 aa5.46□□□□□ -1.54
HDAC3-212ENST00000492407 A0A1B0GW54 56 aa5.46□□□□□ -1.54
HDAC3-212ENST00000492407 C2orf66Q6UXQ4 117 aa5.46□□□□□ -1.54
HDAC3-212ENST00000492407 LPAP08519 4548 aa5.46□□□□□ -1.54
HDAC3-212ENST00000492407 IGIPA6NJ69 53 aa5.45□□□□□ -1.54
HDAC3-212ENST00000492407 C22orf24Q9Y442 160 aa5.45□□□□□ -1.54
HDAC3-212ENST00000492407 TMEM223A0PJW6 202 aa5.44□□□□□ -1.54
HDAC3-212ENST00000492407 F8VRH5 84 aa5.44□□□□□ -1.54
HDAC3-212ENST00000492407 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
HDAC3-212ENST00000492407 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
HDAC3-212ENST00000492407 MUC2Q02817 5179 aa5.44□□□□□ -1.54
HDAC3-212ENST00000492407 TRAV12-1A0A0B4J245 112 aa5.43□□□□□ -1.54
HDAC3-212ENST00000492407 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
HDAC3-212ENST00000492407 PRR4Q16378 134 aa5.43□□□□□ -1.54
HDAC3-212ENST00000492407 LCE2AQ5TA79 106 aaPredicted RBP5.42□□□□□ -1.54
HDAC3-212ENST00000492407 MPLKIPQ8TAP9 179 aa5.42□□□□□ -1.54
HDAC3-212ENST00000492407 TOMM7Q9P0U1 55 aa5.42□□□□□ -1.54
HDAC3-212ENST00000492407 F8WEM9 126 aa5.41□□□□□ -1.54
HDAC3-212ENST00000492407 XAGE1AQ9HD64 81 aa5.4□□□□□ -1.54
HDAC3-212ENST00000492407 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
HDAC3-212ENST00000492407 IGLV5-37A0A075B6J1 123 aa5.39□□□□□ -1.55
HDAC3-212ENST00000492407 IGLV5-45A0A087WSX0 123 aa5.39□□□□□ -1.55
HDAC3-212ENST00000492407 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
HDAC3-212ENST00000492407 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
HDAC3-212ENST00000492407 CLEC2BQ92478 149 aa5.38□□□□□ -1.55
HDAC3-212ENST00000492407 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
HDAC3-212ENST00000492407 SMIM1B2RUZ4 78 aa5.37□□□□□ -1.55
HDAC3-212ENST00000492407 COX7B2Q8TF08 81 aa5.37□□□□□ -1.55
HDAC3-212ENST00000492407 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
HDAC3-212ENST00000492407 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
HDAC3-212ENST00000492407 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
HDAC3-212ENST00000492407 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
HDAC3-212ENST00000492407 TTTY13Q9BZ97 58 aa5.35□□□□□ -1.55
HDAC3-212ENST00000492407 NDUFA12Q9UI09 145 aa5.35□□□□□ -1.55
HDAC3-212ENST00000492407 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-212ENST00000492407 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.55
HDAC3-212ENST00000492407 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
HDAC3-212ENST00000492407 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
HDAC3-212ENST00000492407 COX17Q14061 63 aa5.33□□□□□ -1.56
HDAC3-212ENST00000492407 SFTA2Q6UW10 78 aa5.33□□□□□ -1.56
HDAC3-212ENST00000492407 TRAV22A0A0B4J277 110 aa5.32□□□□□ -1.56
HDAC3-212ENST00000492407 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
HDAC3-212ENST00000492407 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
HDAC3-212ENST00000492407 LINC00304Q8N9R0 145 aa5.32□□□□□ -1.56
HDAC3-212ENST00000492407 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
HDAC3-212ENST00000492407 C11orf86A6NJI1 115 aa5.31□□□□□ -1.56
HDAC3-212ENST00000492407 Q1RN00 199 aa5.31□□□□□ -1.56
HDAC3-212ENST00000492407 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
HDAC3-212ENST00000492407 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
HDAC3-212ENST00000492407 HCG22E2RYF7 251 aa5.3□□□□□ -1.56
HDAC3-212ENST00000492407 DNAL4O96015 105 aa5.3□□□□□ -1.56
HDAC3-212ENST00000492407 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
HDAC3-212ENST00000492407 SPAG11AQ6PDA7 123 aa5.29□□□□□ -1.56
HDAC3-212ENST00000492407 OBSCN-AS1Q96MR7 158 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms