RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
MCF2L-230ENST00000491028 A0A087X002 238 aa11.05□□□□□ -0.64
MCF2L-230ENST00000491028 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
MCF2L-230ENST00000491028 H3BMG7 143 aa11.04□□□□□ -0.64
MCF2L-230ENST00000491028 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
MCF2L-230ENST00000491028 SMIM29Q86T20 159 aa11.04□□□□□ -0.64
MCF2L-230ENST00000491028 C9JAW5 83 aa11.03□□□□□ -0.64
MCF2L-230ENST00000491028 OXTP01178 125 aa11.03□□□□□ -0.64
MCF2L-230ENST00000491028 C3orf22Q8N5N4 141 aa11.02□□□□□ -0.65
MCF2L-230ENST00000491028 PRR26Q8N8Z3 221 aa11.02□□□□□ -0.65
MCF2L-230ENST00000491028 F8WEM9 126 aa11.01□□□□□ -0.65
MCF2L-230ENST00000491028 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
MCF2L-230ENST00000491028 KRTAP13-2Q52LG2 175 aa11.01□□□□□ -0.65
MCF2L-230ENST00000491028 IGLV9-49A0A0B4J1Y8 123 aa11□□□□□ -0.65
MCF2L-230ENST00000491028 UBE2V1Q13404 147 aa11□□□□□ -0.65
MCF2L-230ENST00000491028 H3BT86 120 aa10.99□□□□□ -0.65
MCF2L-230ENST00000491028 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
MCF2L-230ENST00000491028 Q8NBF4 154 aa10.99□□□□□ -0.65
MCF2L-230ENST00000491028 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-230ENST00000491028 MOBPQ13875 183 aa10.98□□□□□ -0.65
MCF2L-230ENST00000491028 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
MCF2L-230ENST00000491028 TYMSOSQ8TAI1 123 aa10.98□□□□□ -0.65
MCF2L-230ENST00000491028 FLG2Q5D862 2391 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-230ENST00000491028 FAT3Q8TDW7 4589 aa10.97□□□□□ -0.65
MCF2L-230ENST00000491028 SSBP3-AS1Q7Z2R9 100 aa10.96□□□□□ -0.65
MCF2L-230ENST00000491028 IGLV8-61A0A075B6I0 122 aa10.95□□□□□ -0.66
MCF2L-230ENST00000491028 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
MCF2L-230ENST00000491028 MTURNQ8N3F0 131 aa10.94□□□□□ -0.66
MCF2L-230ENST00000491028 ANKRD29Q8N6D5 301 aa10.94□□□□□ -0.66
MCF2L-230ENST00000491028 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
MCF2L-230ENST00000491028 A0A1B0GV90 55 aa10.93□□□□□ -0.66
MCF2L-230ENST00000491028 MYCBP2O75592 4640 aa10.93□□□□□ -0.66
MCF2L-230ENST00000491028 MT1HL1P0DM35 61 aa10.91□□□□□ -0.66
MCF2L-230ENST00000491028 Q6JHZ5 121 aa10.91□□□□□ -0.66
MCF2L-230ENST00000491028 PRO0461Q9UI25 63 aa10.91□□□□□ -0.66
MCF2L-230ENST00000491028 JMJD7-PLA2G4BH0Y9G9 81 aa10.89□□□□□ -0.67
MCF2L-230ENST00000491028 F8W1H4 67 aa10.88□□□□□ -0.67
MCF2L-230ENST00000491028 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
MCF2L-230ENST00000491028 RBM3P98179 157 aaKnown RBP10.86□□□□□ -0.67
MCF2L-230ENST00000491028 IGFL1Q6UW32 110 aa10.86□□□□□ -0.67
MCF2L-230ENST00000491028 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
MCF2L-230ENST00000491028 A0A1B0GV72 72 aa10.84□□□□□ -0.67
MCF2L-230ENST00000491028 J3QL48 77 aa10.84□□□□□ -0.67
MCF2L-230ENST00000491028 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
MCF2L-230ENST00000491028 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
MCF2L-230ENST00000491028 TRBV7-4A0A0J9YYF1 115 aa10.82□□□□□ -0.68
MCF2L-230ENST00000491028 CD164Q04900 197 aa10.82□□□□□ -0.68
MCF2L-230ENST00000491028 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
MCF2L-230ENST00000491028 DSCR8Q96T75 97 aa10.82□□□□□ -0.68
MCF2L-230ENST00000491028 HERC1Q15751 4861 aa10.81□□□□□ -0.68
MCF2L-230ENST00000491028 TNXBP22105 4242 aa10.8□□□□□ -0.68
MCF2L-230ENST00000491028 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
MCF2L-230ENST00000491028 SPINK1P00995 79 aa10.79□□□□□ -0.68
MCF2L-230ENST00000491028 PDE6GP18545 87 aa10.78□□□□□ -0.68
MCF2L-230ENST00000491028 Q6Q795 121 aa10.78□□□□□ -0.68
MCF2L-230ENST00000491028 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
MCF2L-230ENST00000491028 RPS29P62273 56 aaKnown RBP10.77□□□□□ -0.69
MCF2L-230ENST00000491028 C21orf62-AS1Q17RA5 79 aa10.77□□□□□ -0.69
MCF2L-230ENST00000491028 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
MCF2L-230ENST00000491028 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
MCF2L-230ENST00000491028 HRCT1Q6UXD1 115 aa10.75□□□□□ -0.69
MCF2L-230ENST00000491028 CCKP06307 115 aa10.74□□□□□ -0.69
MCF2L-230ENST00000491028 Q6ZQT0 140 aa10.74□□□□□ -0.69
MCF2L-230ENST00000491028 DMBT1Q9UGM3 2413 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-230ENST00000491028 A0A1W2PNM2 257 aa10.73□□□□□ -0.69
MCF2L-230ENST00000491028 ETDBQ3ZM63 59 aa10.73□□□□□ -0.69
MCF2L-230ENST00000491028 TRBV7-7A0A0K0K1E9 115 aa10.72□□□□□ -0.69
MCF2L-230ENST00000491028 LIMD2Q9BT23 127 aa10.72□□□□□ -0.69
MCF2L-230ENST00000491028 VPS25Q9BRG1 176 aa10.7□□□□□ -0.7
MCF2L-230ENST00000491028 Q5XG85 94 aa10.69□□□□□ -0.7
MCF2L-230ENST00000491028 A0A1B0GW54 56 aa10.67□□□□□ -0.7
MCF2L-230ENST00000491028 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
MCF2L-230ENST00000491028 A0A087WSZ3 146 aa10.65□□□□□ -0.7
MCF2L-230ENST00000491028 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
MCF2L-230ENST00000491028 C1orf195Q5TG92 126 aa10.53□□□□□ -0.72
MCF2L-230ENST00000491028 RETNLBQ9BQ08 111 aa10.53□□□□□ -0.72
MCF2L-230ENST00000491028 FP248Q71RG6 208 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-230ENST00000491028 Q96NJ1 140 aa10.49□□□□□ -0.73
MCF2L-230ENST00000491028 FAM240AA0A1B0GVK7 77 aa10.48□□□□□ -0.73
MCF2L-230ENST00000491028 ACYP1P07311 99 aa10.48□□□□□ -0.73
MCF2L-230ENST00000491028 NREPQ16612 68 aa10.48□□□□□ -0.73
MCF2L-230ENST00000491028 LINC00472Q9H8W2 130 aa10.48□□□□□ -0.73
MCF2L-230ENST00000491028 PRR4Q16378 134 aa10.46□□□□□ -0.73
MCF2L-230ENST00000491028 LINC00846Q9NV44 126 aa10.46□□□□□ -0.73
MCF2L-230ENST00000491028 J3QR89 54 aa10.45□□□□□ -0.74
MCF2L-230ENST00000491028 UBL5Q9BZL1 73 aa10.45□□□□□ -0.74
MCF2L-230ENST00000491028 J3KT08 172 aa10.43□□□□□ -0.74
MCF2L-230ENST00000491028 Q6ZVQ6 151 aa10.43□□□□□ -0.74
MCF2L-230ENST00000491028 IGLV7-46A0A075B6I9 117 aa10.42□□□□□ -0.74
MCF2L-230ENST00000491028 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
MCF2L-230ENST00000491028 SIGMAR1Q99720 223 aa10.4□□□□□ -0.74
MCF2L-230ENST00000491028 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
MCF2L-230ENST00000491028 BPY2O14599 106 aa10.35□□□□□ -0.75
MCF2L-230ENST00000491028 K7ERU9 68 aa10.34□□□□□ -0.75
MCF2L-230ENST00000491028 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
MCF2L-230ENST00000491028 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
MCF2L-230ENST00000491028 A8MWP4 228 aa10.31□□□□□ -0.76
MCF2L-230ENST00000491028 NDUFB1O75438 58 aa10.31□□□□□ -0.76
MCF2L-230ENST00000491028 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
MCF2L-230ENST00000491028 A0A1B0GVX0 72 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms