RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 IGLV7-46A0A075B6I9 117 aa9.9□□□□□ -0.83
MDC1-206ENST00000489540 LINC01547P58512 204 aaPredicted RBP9.9□□□□□ -0.83
MDC1-206ENST00000489540 A0A0B4J2C4 111 aa9.89□□□□□ -0.83
MDC1-206ENST00000489540 FXYD2P54710 66 aa9.89□□□□□ -0.83
MDC1-206ENST00000489540 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
MDC1-206ENST00000489540 Q1RN00 199 aa9.88□□□□□ -0.83
MDC1-206ENST00000489540 FP248Q71RG6 208 aaPredicted RBP9.88□□□□□ -0.83
MDC1-206ENST00000489540 FABP2P12104 132 aa9.87□□□□□ -0.83
MDC1-206ENST00000489540 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
MDC1-206ENST00000489540 H3BUT2 72 aa9.86□□□□□ -0.83
MDC1-206ENST00000489540 H7C2G1 150 aa9.86□□□□□ -0.83
MDC1-206ENST00000489540 Q8N377 158 aa9.86□□□□□ -0.83
MDC1-206ENST00000489540 A0A1W2PPM0 123 aa9.85□□□□□ -0.83
MDC1-206ENST00000489540 K7EP34 96 aa9.84□□□□□ -0.83
MDC1-206ENST00000489540 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
MDC1-206ENST00000489540 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
MDC1-206ENST00000489540 Q6ZQY7 126 aa9.82□□□□□ -0.84
MDC1-206ENST00000489540 H0YGX0 51 aa9.82□□□□□ -0.84
MDC1-206ENST00000489540 SNCGO76070 127 aa9.82□□□□□ -0.84
MDC1-206ENST00000489540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.82□□□□□ -0.84
MDC1-206ENST00000489540 SPCS1Q9Y6A9 102 aa9.82□□□□□ -0.84
MDC1-206ENST00000489540 CD164Q04900 197 aa9.81□□□□□ -0.84
MDC1-206ENST00000489540 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
MDC1-206ENST00000489540 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
MDC1-206ENST00000489540 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
MDC1-206ENST00000489540 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
MDC1-206ENST00000489540 F8WEM9 126 aa9.78□□□□□ -0.84
MDC1-206ENST00000489540 PPDPFLQ8WWR9 84 aa9.78□□□□□ -0.84
MDC1-206ENST00000489540 K7ERJ3 54 aa9.77□□□□□ -0.85
MDC1-206ENST00000489540 OCIAD2Q56VL3 154 aa9.74□□□□□ -0.85
MDC1-206ENST00000489540 RNF213Q63HN8 5207 aa9.73□□□□□ -0.85
MDC1-206ENST00000489540 A0A1B0GX51 115 aa9.73□□□□□ -0.85
MDC1-206ENST00000489540 NAA38Q9BRA0 125 aaKnown RBP9.73□□□□□ -0.85
MDC1-206ENST00000489540 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
MDC1-206ENST00000489540 K7ERU9 68 aa9.72□□□□□ -0.85
MDC1-206ENST00000489540 KRTAP13-3Q3SY46 172 aa9.72□□□□□ -0.85
MDC1-206ENST00000489540 Q5XG85 94 aa9.72□□□□□ -0.85
MDC1-206ENST00000489540 Q6JHZ5 121 aa9.72□□□□□ -0.85
MDC1-206ENST00000489540 F8W1H4 67 aa9.71□□□□□ -0.86
MDC1-206ENST00000489540 GHRHP01286 108 aa9.71□□□□□ -0.86
MDC1-206ENST00000489540 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.86
MDC1-206ENST00000489540 A0A0G2JQZ4 141 aa9.7□□□□□ -0.86
MDC1-206ENST00000489540 TRIAP1O43715 76 aa9.7□□□□□ -0.86
MDC1-206ENST00000489540 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
MDC1-206ENST00000489540 PSMB2P49721 201 aa9.68□□□□□ -0.86
MDC1-206ENST00000489540 COX6CP09669 75 aa9.67□□□□□ -0.86
MDC1-206ENST00000489540 CLEC2BQ92478 149 aa9.66□□□□□ -0.86
MDC1-206ENST00000489540 TCL1BO95988 128 aa9.65□□□□□ -0.87
MDC1-206ENST00000489540 IGFL1Q6UW32 110 aa9.65□□□□□ -0.87
MDC1-206ENST00000489540 J3QR89 54 aa9.63□□□□□ -0.87
MDC1-206ENST00000489540 NDUFV3P56181 108 aaKnown RBP9.63□□□□□ -0.87
MDC1-206ENST00000489540 H3BMG7 143 aa9.62□□□□□ -0.87
MDC1-206ENST00000489540 H3BQ85 93 aa9.61□□□□□ -0.87
MDC1-206ENST00000489540 DNAL4O96015 105 aa9.61□□□□□ -0.87
MDC1-206ENST00000489540 SCGB1C2P0DMR2 95 aa9.61□□□□□ -0.87
MDC1-206ENST00000489540 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
MDC1-206ENST00000489540 MUC17Q685J3 4493 aa9.6□□□□□ -0.87
MDC1-206ENST00000489540 TRBV7-7A0A0K0K1E9 115 aa9.6□□□□□ -0.87
MDC1-206ENST00000489540 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
MDC1-206ENST00000489540 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
MDC1-206ENST00000489540 PRO0461Q9UI25 63 aa9.56□□□□□ -0.88
MDC1-206ENST00000489540 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
MDC1-206ENST00000489540 Q6Q795 121 aa9.56□□□□□ -0.88
MDC1-206ENST00000489540 VPS25Q9BRG1 176 aa9.56□□□□□ -0.88
MDC1-206ENST00000489540 MUC2Q02817 5179 aa9.55□□□□□ -0.88
MDC1-206ENST00000489540 TMEM256-PLSCR3K7ERE1 68 aa9.55□□□□□ -0.88
MDC1-206ENST00000489540 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
MDC1-206ENST00000489540 XP32Q5T750 250 aa9.55□□□□□ -0.88
MDC1-206ENST00000489540 TRACP01848 142 aa9.53□□□□□ -0.88
MDC1-206ENST00000489540 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
MDC1-206ENST00000489540 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
MDC1-206ENST00000489540 C9orf92A6NGG3 77 aa9.51□□□□□ -0.89
MDC1-206ENST00000489540 LST1O00453 97 aa9.5□□□□□ -0.89
MDC1-206ENST00000489540 ETDBQ3ZM63 59 aa9.5□□□□□ -0.89
MDC1-206ENST00000489540 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
MDC1-206ENST00000489540 PCP4P48539 62 aa9.47□□□□□ -0.89
MDC1-206ENST00000489540 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
MDC1-206ENST00000489540 C9JAW5 83 aa9.46□□□□□ -0.9
MDC1-206ENST00000489540 H3BT86 120 aa9.45□□□□□ -0.9
MDC1-206ENST00000489540 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
MDC1-206ENST00000489540 A0A087WSZ3 146 aa9.44□□□□□ -0.9
MDC1-206ENST00000489540 MTURNQ8N3F0 131 aa9.44□□□□□ -0.9
MDC1-206ENST00000489540 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
MDC1-206ENST00000489540 BAALC-AS2P0C853 105 aa9.42□□□□□ -0.9
MDC1-206ENST00000489540 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
MDC1-206ENST00000489540 A0A1B0GV72 72 aa9.41□□□□□ -0.9
MDC1-206ENST00000489540 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
MDC1-206ENST00000489540 CCKP06307 115 aa9.37□□□□□ -0.91
MDC1-206ENST00000489540 PCOTHQ58A44 107 aa9.36□□□□□ -0.91
MDC1-206ENST00000489540 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
MDC1-206ENST00000489540 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
MDC1-206ENST00000489540 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
MDC1-206ENST00000489540 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
MDC1-206ENST00000489540 FAT4Q6V0I7 4981 aa9.33□□□□□ -0.92
MDC1-206ENST00000489540 Q96NJ1 140 aa9.33□□□□□ -0.92
MDC1-206ENST00000489540 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
MDC1-206ENST00000489540 SCGB1A1P11684 91 aa9.31□□□□□ -0.92
MDC1-206ENST00000489540 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
MDC1-206ENST00000489540 JMJD7-PLA2G4BH0Y9G9 81 aa9.31□□□□□ -0.92
MDC1-206ENST00000489540 FAM240AA0A1B0GVK7 77 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms