RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 KRTAP1-5Q9BYS1 174 aa5.4□□□□□ -1.54
VTI1A-207ENST00000489357 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
VTI1A-207ENST00000489357 H0Y9J4 135 aa5.39□□□□□ -1.55
VTI1A-207ENST00000489357 REG3GQ6UW15 175 aa5.39□□□□□ -1.55
VTI1A-207ENST00000489357 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
VTI1A-207ENST00000489357 KRTAP7-1Q8IUC3 87 aa5.38□□□□□ -1.55
VTI1A-207ENST00000489357 C9orf163Q8N9P6 203 aa5.38□□□□□ -1.55
VTI1A-207ENST00000489357 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
VTI1A-207ENST00000489357 RPL37AP8A6NKH3 93 aa5.37□□□□□ -1.55
VTI1A-207ENST00000489357 UQCRQO14949 82 aa5.37□□□□□ -1.55
VTI1A-207ENST00000489357 Q6ZVQ6 151 aa5.37□□□□□ -1.55
VTI1A-207ENST00000489357 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
VTI1A-207ENST00000489357 A0A096LNI7 61 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 LRCOL1A6NCL2 159 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 FUSP35637 526 aaKnown RBP eCLIP5.36□□□□□ -1.55
VTI1A-207ENST00000489357 Q8N377 158 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 SMIM20Q8N5G0 67 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 Q9BRP9 147 aa5.36□□□□□ -1.55
VTI1A-207ENST00000489357 PKD1P98161 4303 aa5.35□□□□□ -1.55
VTI1A-207ENST00000489357 IGKV3D-7A0A0C4DH55 119 aa5.35□□□□□ -1.55
VTI1A-207ENST00000489357 M0R2N4 97 aa5.35□□□□□ -1.55
VTI1A-207ENST00000489357 RTL8CO15255 209 aa5.35□□□□□ -1.55
VTI1A-207ENST00000489357 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
VTI1A-207ENST00000489357 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
VTI1A-207ENST00000489357 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
VTI1A-207ENST00000489357 EPM2AB3EWF7 344 aa5.34□□□□□ -1.55
VTI1A-207ENST00000489357 COX7CP15954 63 aa5.34□□□□□ -1.55
VTI1A-207ENST00000489357 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
VTI1A-207ENST00000489357 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
VTI1A-207ENST00000489357 UBE2BP63146 152 aa5.33□□□□□ -1.56
VTI1A-207ENST00000489357 SERP2Q8N6R1 65 aa5.33□□□□□ -1.56
VTI1A-207ENST00000489357 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
VTI1A-207ENST00000489357 IGLV8-61A0A075B6I0 122 aa5.32□□□□□ -1.56
VTI1A-207ENST00000489357 A0A1B0GVY2 172 aa5.32□□□□□ -1.56
VTI1A-207ENST00000489357 F8WEM9 126 aa5.32□□□□□ -1.56
VTI1A-207ENST00000489357 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
VTI1A-207ENST00000489357 SPRR4Q96PI1 79 aa5.32□□□□□ -1.56
VTI1A-207ENST00000489357 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 CRYGAP11844 174 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 SPRR1BP22528 89 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 HAMPP81172 84 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 C1orf137Q5JT78 98 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 Q8NBF4 154 aa5.31□□□□□ -1.56
VTI1A-207ENST00000489357 HECTD4Q9Y4D8 3996 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 IGKV2-24A0A0C4DH68 120 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 A0A1W2PNN7 141 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 NREPQ16612 68 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 DEFB105AQ8NG35 78 aa5.3□□□□□ -1.56
VTI1A-207ENST00000489357 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
VTI1A-207ENST00000489357 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.29□□□□□ -1.56
VTI1A-207ENST00000489357 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
VTI1A-207ENST00000489357 A0A087WTM6 91 aa5.28□□□□□ -1.56
VTI1A-207ENST00000489357 A0A087WVE0 104 aa5.28□□□□□ -1.56
VTI1A-207ENST00000489357 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
VTI1A-207ENST00000489357 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
VTI1A-207ENST00000489357 SPACA4Q8TDM5 124 aa5.28□□□□□ -1.56
VTI1A-207ENST00000489357 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
VTI1A-207ENST00000489357 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
VTI1A-207ENST00000489357 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
VTI1A-207ENST00000489357 SMIM29Q86T20 159 aa5.27□□□□□ -1.57
VTI1A-207ENST00000489357 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
VTI1A-207ENST00000489357 BPY2O14599 106 aa5.26□□□□□ -1.57
VTI1A-207ENST00000489357 ST20-AS1Q8NBB2 130 aa5.26□□□□□ -1.57
VTI1A-207ENST00000489357 DNAH5Q8TE73 4624 aa5.26□□□□□ -1.57
VTI1A-207ENST00000489357 UBE2AP49459 152 aa5.25□□□□□ -1.57
VTI1A-207ENST00000489357 RPL37AP61513 92 aaKnown RBP5.25□□□□□ -1.57
VTI1A-207ENST00000489357 PRLHP81277 87 aa5.25□□□□□ -1.57
VTI1A-207ENST00000489357 CHTF8P0CG12 524 aa5.24□□□□□ -1.57
VTI1A-207ENST00000489357 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
VTI1A-207ENST00000489357 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
VTI1A-207ENST00000489357 HIGD2AQ9BW72 106 aa5.24□□□□□ -1.57
VTI1A-207ENST00000489357 LRP1BQ9NZR2 4599 aa5.24□□□□□ -1.57
VTI1A-207ENST00000489357 TMEM258P61165 79 aa5.23□□□□□ -1.57
VTI1A-207ENST00000489357 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
VTI1A-207ENST00000489357 IGKV4-1P06312 121 aa5.22□□□□□ -1.57
VTI1A-207ENST00000489357 IGFL1Q6UW32 110 aa5.22□□□□□ -1.57
VTI1A-207ENST00000489357 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
VTI1A-207ENST00000489357 DNAH8Q96JB1 4490 aa5.21□□□□□ -1.57
VTI1A-207ENST00000489357 NDUFC1O43677 76 aa5.21□□□□□ -1.58
VTI1A-207ENST00000489357 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
VTI1A-207ENST00000489357 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
VTI1A-207ENST00000489357 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
VTI1A-207ENST00000489357 DPH3Q96FX2 82 aa5.2□□□□□ -1.58
VTI1A-207ENST00000489357 KRTAP11-1Q8IUC1 163 aa5.19□□□□□ -1.58
VTI1A-207ENST00000489357 KIAA1109Q2LD37 5005 aa5.19□□□□□ -1.58
VTI1A-207ENST00000489357 RYR1P21817 5038 aa5.18□□□□□ -1.58
VTI1A-207ENST00000489357 IGLV5-52A0A0A0MRZ9 124 aa5.18□□□□□ -1.58
VTI1A-207ENST00000489357 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
VTI1A-207ENST00000489357 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
VTI1A-207ENST00000489357 HERC2O95714 4834 aa5.18□□□□□ -1.58
VTI1A-207ENST00000489357 APOBP04114 4563 aaKnown RBP5.17□□□□□ -1.58
VTI1A-207ENST00000489357 PANO1I0J062 215 aa5.17□□□□□ -1.58
VTI1A-207ENST00000489357 J3KT08 172 aa5.17□□□□□ -1.58
VTI1A-207ENST00000489357 SCXQ7RTU7 201 aa5.17□□□□□ -1.58
VTI1A-207ENST00000489357 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
VTI1A-207ENST00000489357 DSCR10P59022 87 aa5.16□□□□□ -1.58
VTI1A-207ENST00000489357 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
VTI1A-207ENST00000489357 ZNF861PO60384 105 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms