RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
CTDSP1-209ENST00000488627 Q5XG85 94 aa8.84□□□□□ -0.99
CTDSP1-209ENST00000488627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.84□□□□□ -0.99
CTDSP1-209ENST00000488627 RAB37Q96AX2 223 aa8.84□□□□□ -0.99
CTDSP1-209ENST00000488627 FXYD2P54710 66 aa8.82□□□□□ -1
CTDSP1-209ENST00000488627 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
CTDSP1-209ENST00000488627 FAM218AQ96MZ4 157 aa8.8□□□□□ -1
CTDSP1-209ENST00000488627 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
CTDSP1-209ENST00000488627 PRO1854Q9UHT4 67 aa8.79□□□□□ -1
CTDSP1-209ENST00000488627 H0YGX0 51 aa8.78□□□□□ -1
CTDSP1-209ENST00000488627 OCIAD2Q56VL3 154 aa8.78□□□□□ -1
CTDSP1-209ENST00000488627 XP32Q5T750 250 aa8.78□□□□□ -1
CTDSP1-209ENST00000488627 PPDPFLQ8WWR9 84 aa8.78□□□□□ -1
CTDSP1-209ENST00000488627 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
CTDSP1-209ENST00000488627 A6NJY4 79 aa8.77□□□□□ -1.01
CTDSP1-209ENST00000488627 F8WEM9 126 aa8.77□□□□□ -1.01
CTDSP1-209ENST00000488627 C1orf195Q5TG92 126 aa8.77□□□□□ -1.01
CTDSP1-209ENST00000488627 HSD52Q0P140 79 aa8.76□□□□□ -1.01
CTDSP1-209ENST00000488627 Q6JHZ5 121 aa8.76□□□□□ -1.01
CTDSP1-209ENST00000488627 IGFL1Q6UW32 110 aa8.76□□□□□ -1.01
CTDSP1-209ENST00000488627 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
CTDSP1-209ENST00000488627 A0A0U1RQV1 116 aa8.74□□□□□ -1.01
CTDSP1-209ENST00000488627 CLEC2BQ92478 149 aa8.73□□□□□ -1.01
CTDSP1-209ENST00000488627 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
CTDSP1-209ENST00000488627 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
CTDSP1-209ENST00000488627 UQCR10Q9UDW1 63 aa8.73□□□□□ -1.01
CTDSP1-209ENST00000488627 TRIAP1O43715 76 aa8.72□□□□□ -1.01
CTDSP1-209ENST00000488627 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
CTDSP1-209ENST00000488627 TRBV7-7A0A0K0K1E9 115 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 A0A1B0GX51 115 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 H3BUT2 72 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 K7ERJ3 54 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 SNCGO76070 127 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 TCL1BO95988 128 aa8.7□□□□□ -1.02
CTDSP1-209ENST00000488627 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
CTDSP1-209ENST00000488627 NDUFV3P56181 108 aaKnown RBP8.67□□□□□ -1.02
CTDSP1-209ENST00000488627 LCE2AQ5TA79 106 aaPredicted RBP8.66□□□□□ -1.02
CTDSP1-209ENST00000488627 Q6Q795 121 aa8.63□□□□□ -1.03
CTDSP1-209ENST00000488627 PSMB2P49721 201 aa8.62□□□□□ -1.03
CTDSP1-209ENST00000488627 H3BMG7 143 aa8.61□□□□□ -1.03
CTDSP1-209ENST00000488627 GHRHP01286 108 aa8.61□□□□□ -1.03
CTDSP1-209ENST00000488627 FABP2P12104 132 aa8.61□□□□□ -1.03
CTDSP1-209ENST00000488627 PCOTHQ58A44 107 aa8.6□□□□□ -1.03
CTDSP1-209ENST00000488627 COX6CP09669 75 aa8.59□□□□□ -1.03
CTDSP1-209ENST00000488627 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
CTDSP1-209ENST00000488627 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
CTDSP1-209ENST00000488627 DNAL4O96015 105 aa8.56□□□□□ -1.04
CTDSP1-209ENST00000488627 A0A1W2PNM2 257 aa8.55□□□□□ -1.04
CTDSP1-209ENST00000488627 H3BQ85 93 aa8.55□□□□□ -1.04
CTDSP1-209ENST00000488627 LST1O00453 97 aa8.55□□□□□ -1.04
CTDSP1-209ENST00000488627 SMIM6P0DI80 62 aa8.54□□□□□ -1.04
CTDSP1-209ENST00000488627 RPL37P61927 97 aaKnown RBP8.54□□□□□ -1.04
CTDSP1-209ENST00000488627 A0A087WSZ3 146 aa8.53□□□□□ -1.04
CTDSP1-209ENST00000488627 TMEM256-PLSCR3K7ERE1 68 aa8.53□□□□□ -1.04
CTDSP1-209ENST00000488627 TRACP01848 142 aa8.53□□□□□ -1.04
CTDSP1-209ENST00000488627 SS18L2Q9UHA2 77 aa8.52□□□□□ -1.05
CTDSP1-209ENST00000488627 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
CTDSP1-209ENST00000488627 Q96NJ1 140 aa8.51□□□□□ -1.05
CTDSP1-209ENST00000488627 UBE2V1Q13404 147 aa8.5□□□□□ -1.05
CTDSP1-209ENST00000488627 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
CTDSP1-209ENST00000488627 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
CTDSP1-209ENST00000488627 LCE2CQ5TA81 110 aa8.49□□□□□ -1.05
CTDSP1-209ENST00000488627 A0A1B0GV72 72 aa8.48□□□□□ -1.05
CTDSP1-209ENST00000488627 M0R143 59 aa8.48□□□□□ -1.05
CTDSP1-209ENST00000488627 OBSCN-AS1Q96MR7 158 aa8.48□□□□□ -1.05
CTDSP1-209ENST00000488627 TRBV7-4A0A0J9YYF1 115 aa8.47□□□□□ -1.05
CTDSP1-209ENST00000488627 LOC105371267A0A1B0GV96 52 aa8.46□□□□□ -1.06
CTDSP1-209ENST00000488627 Q75L30 129 aa8.44□□□□□ -1.06
CTDSP1-209ENST00000488627 NAA38Q9BRA0 125 aaKnown RBP8.44□□□□□ -1.06
CTDSP1-209ENST00000488627 BAALC-AS2P0C853 105 aa8.43□□□□□ -1.06
CTDSP1-209ENST00000488627 CCKP06307 115 aa8.42□□□□□ -1.06
CTDSP1-209ENST00000488627 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
CTDSP1-209ENST00000488627 LINC00472Q9H8W2 130 aa8.4□□□□□ -1.06
CTDSP1-209ENST00000488627 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
CTDSP1-209ENST00000488627 ATXN8Q156A1 80 aa8.38□□□□□ -1.07
CTDSP1-209ENST00000488627 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
CTDSP1-209ENST00000488627 A8MUU9 505 aa8.36□□□□□ -1.07
CTDSP1-209ENST00000488627 IGKV4-1P06312 121 aa8.36□□□□□ -1.07
CTDSP1-209ENST00000488627 DSCR8Q96T75 97 aa8.36□□□□□ -1.07
CTDSP1-209ENST00000488627 DSCR10P59022 87 aa8.35□□□□□ -1.07
CTDSP1-209ENST00000488627 ATP11AUNQ6ZP68 121 aa8.35□□□□□ -1.07
CTDSP1-209ENST00000488627 SIGMAR1Q99720 223 aa8.35□□□□□ -1.07
CTDSP1-209ENST00000488627 KRTAP9-2Q9BYQ4 174 aa8.35□□□□□ -1.07
CTDSP1-209ENST00000488627 MT1HP80294 61 aa8.34□□□□□ -1.07
CTDSP1-209ENST00000488627 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
CTDSP1-209ENST00000488627 C9JAW5 83 aa8.32□□□□□ -1.08
CTDSP1-209ENST00000488627 BATFQ16520 125 aa8.32□□□□□ -1.08
CTDSP1-209ENST00000488627 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
CTDSP1-209ENST00000488627 VPS25Q9BRG1 176 aa8.32□□□□□ -1.08
CTDSP1-209ENST00000488627 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
CTDSP1-209ENST00000488627 LINC00313P59037 77 aa8.31□□□□□ -1.08
CTDSP1-209ENST00000488627 TRBV20-1A0A075B6N2 111 aa8.29□□□□□ -1.08
CTDSP1-209ENST00000488627 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
CTDSP1-209ENST00000488627 Q6ZQT0 140 aa8.29□□□□□ -1.08
CTDSP1-209ENST00000488627 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
CTDSP1-209ENST00000488627 LOC110117498A0A087WWA1 95 aa8.27□□□□□ -1.09
CTDSP1-209ENST00000488627 C9orf118A6NHY6 69 aa8.27□□□□□ -1.09
CTDSP1-209ENST00000488627 TAX1BP3O14907 124 aa8.27□□□□□ -1.09
CTDSP1-209ENST00000488627 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
CTDSP1-209ENST00000488627 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms