RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
TRIM56-204ENST00000487252 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 Q8NDZ9 215 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 C6orf48Q9UBA6 75 aa6.77□□□□□ -1.33
TRIM56-204ENST00000487252 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
TRIM56-204ENST00000487252 OBSCN-AS1Q96MR7 158 aa6.75□□□□□ -1.33
TRIM56-204ENST00000487252 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
TRIM56-204ENST00000487252 MT-ATP8P03928 68 aa6.74□□□□□ -1.33
TRIM56-204ENST00000487252 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
TRIM56-204ENST00000487252 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
TRIM56-204ENST00000487252 ACYP1P07311 99 aa6.73□□□□□ -1.33
TRIM56-204ENST00000487252 C21orf62-AS1Q17RA5 79 aa6.73□□□□□ -1.33
TRIM56-204ENST00000487252 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
TRIM56-204ENST00000487252 USH2AO75445 5202 aa6.73□□□□□ -1.33
TRIM56-204ENST00000487252 A0A087X002 238 aa6.72□□□□□ -1.33
TRIM56-204ENST00000487252 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
TRIM56-204ENST00000487252 NCR3O14931 201 aa6.72□□□□□ -1.33
TRIM56-204ENST00000487252 DNAL4O96015 105 aa6.72□□□□□ -1.33
TRIM56-204ENST00000487252 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
TRIM56-204ENST00000487252 KRTAP4-7Q9BYR0 210 aa6.71□□□□□ -1.34
TRIM56-204ENST00000487252 VPREB1P12018 145 aa6.7□□□□□ -1.34
TRIM56-204ENST00000487252 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
TRIM56-204ENST00000487252 S100A7L2Q5SY68 101 aa6.7□□□□□ -1.34
TRIM56-204ENST00000487252 LINC00575Q6W349 94 aa6.7□□□□□ -1.34
TRIM56-204ENST00000487252 ORMDL1Q9P0S3 153 aa6.7□□□□□ -1.34
TRIM56-204ENST00000487252 NDUFC2-KCTD14E9PQ53 114 aa6.69□□□□□ -1.34
TRIM56-204ENST00000487252 C6orf99Q4VX62 202 aa6.69□□□□□ -1.34
TRIM56-204ENST00000487252 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
TRIM56-204ENST00000487252 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
TRIM56-204ENST00000487252 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
TRIM56-204ENST00000487252 RPL18AQ02543 176 aaKnown RBP6.68□□□□□ -1.34
TRIM56-204ENST00000487252 Q6Q795 121 aa6.68□□□□□ -1.34
TRIM56-204ENST00000487252 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
TRIM56-204ENST00000487252 M0R378 163 aa6.67□□□□□ -1.34
TRIM56-204ENST00000487252 TLX1NBP0CAT3 122 aa6.67□□□□□ -1.34
TRIM56-204ENST00000487252 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
TRIM56-204ENST00000487252 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
TRIM56-204ENST00000487252 XAGE1AQ9HD64 81 aa6.67□□□□□ -1.34
TRIM56-204ENST00000487252 SNCGO76070 127 aa6.66□□□□□ -1.34
TRIM56-204ENST00000487252 C9orf129Q5T035 196 aaKnown RBP6.66□□□□□ -1.34
TRIM56-204ENST00000487252 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
TRIM56-204ENST00000487252 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
TRIM56-204ENST00000487252 H3BQ85 93 aa6.65□□□□□ -1.34
TRIM56-204ENST00000487252 TMEM256-PLSCR3K7ERE1 68 aa6.65□□□□□ -1.34
TRIM56-204ENST00000487252 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
TRIM56-204ENST00000487252 hADV29S1A0JD25 119 aa6.64□□□□□ -1.35
TRIM56-204ENST00000487252 LCE1DQ5T752 114 aa6.64□□□□□ -1.35
TRIM56-204ENST00000487252 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 JMJD7-PLA2G4BH0Y9G9 81 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
TRIM56-204ENST00000487252 ZNF861PO60384 105 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 SMCR5Q8TEV8 140 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 C14orf132Q9NPU4 83 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
TRIM56-204ENST00000487252 COX7BP24311 80 aa6.62□□□□□ -1.35
TRIM56-204ENST00000487252 ELOF1P60002 83 aaKnown RBP6.62□□□□□ -1.35
TRIM56-204ENST00000487252 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
TRIM56-204ENST00000487252 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
TRIM56-204ENST00000487252 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
TRIM56-204ENST00000487252 CCKP06307 115 aa6.61□□□□□ -1.35
TRIM56-204ENST00000487252 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
TRIM56-204ENST00000487252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.61□□□□□ -1.35
TRIM56-204ENST00000487252 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
TRIM56-204ENST00000487252 IMUPQ9GZP8 106 aa6.61□□□□□ -1.35
TRIM56-204ENST00000487252 KCNQ1DNQ9H478 68 aa6.59□□□□□ -1.35
TRIM56-204ENST00000487252 LOC110117498A0A087WWA1 95 aa6.58□□□□□ -1.36
TRIM56-204ENST00000487252 FP248Q71RG6 208 aaPredicted RBP6.58□□□□□ -1.36
TRIM56-204ENST00000487252 A0A1B0GV72 72 aa6.57□□□□□ -1.36
TRIM56-204ENST00000487252 GHRHP01286 108 aa6.57□□□□□ -1.36
TRIM56-204ENST00000487252 Q6ZQY7 126 aa6.57□□□□□ -1.36
TRIM56-204ENST00000487252 NDUFV3P56181 108 aaKnown RBP6.56□□□□□ -1.36
TRIM56-204ENST00000487252 Q6JHZ5 121 aa6.56□□□□□ -1.36
TRIM56-204ENST00000487252 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
TRIM56-204ENST00000487252 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
TRIM56-204ENST00000487252 PDE6GP18545 87 aa6.55□□□□□ -1.36
TRIM56-204ENST00000487252 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
TRIM56-204ENST00000487252 Q6ZQT0 140 aa6.55□□□□□ -1.36
TRIM56-204ENST00000487252 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
TRIM56-204ENST00000487252 KRTAP4-16G5E9R7 235 aaPredicted RBP6.54□□□□□ -1.36
TRIM56-204ENST00000487252 PRYO14603 147 aa6.54□□□□□ -1.36
TRIM56-204ENST00000487252 SPRR1AP35321 89 aa6.54□□□□□ -1.36
TRIM56-204ENST00000487252 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
TRIM56-204ENST00000487252 UBE2BP63146 152 aa6.53□□□□□ -1.36
TRIM56-204ENST00000487252 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
TRIM56-204ENST00000487252 ANAPC11Q9NYG5 84 aa6.53□□□□□ -1.36
TRIM56-204ENST00000487252 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
TRIM56-204ENST00000487252 TRBV7-4A0A0J9YYF1 115 aa6.51□□□□□ -1.37
TRIM56-204ENST00000487252 M0R2T5 61 aa6.51□□□□□ -1.37
TRIM56-204ENST00000487252 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
TRIM56-204ENST00000487252 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
TRIM56-204ENST00000487252 B5MCH6 92 aa6.5□□□□□ -1.37
TRIM56-204ENST00000487252 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
TRIM56-204ENST00000487252 DHRS4-AS1Q9P1J3 65 aa6.5□□□□□ -1.37
TRIM56-204ENST00000487252 Q6ZRX8 168 aa6.49□□□□□ -1.37
TRIM56-204ENST00000487252 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms