RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 ACANP16112 2415 aa-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 SCN11AQ9UI33 1791 aa-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 REV3LO60673 3130 aa-0.02□□□□□ -2.41
TRA2A-207ENST00000486934 DDX60LQ5H9U9 1706 aaKnown RBP-0.03□□□□□ -2.41
TRA2A-207ENST00000486934 CRIP1P50238 77 aa-0.03□□□□□ -2.41
TRA2A-207ENST00000486934 PRLHP81277 87 aa-0.03□□□□□ -2.41
TRA2A-207ENST00000486934 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.03□□□□□ -2.41
TRA2A-207ENST00000486934 PDE4DIPQ5VU43 2346 aa-0.03□□□□□ -2.41
TRA2A-207ENST00000486934 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.42
TRA2A-207ENST00000486934 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
TRA2A-207ENST00000486934 PLCH1Q4KWH8 1693 aa-0.04□□□□□ -2.42
TRA2A-207ENST00000486934 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
TRA2A-207ENST00000486934 HILPDAQ9Y5L2 63 aa-0.04□□□□□ -2.42
TRA2A-207ENST00000486934 RICTORQ6R327 1708 aa-0.04□□□□□ -2.42
TRA2A-207ENST00000486934 DIP2AQ14689 1571 aa-0.06□□□□□ -2.42
TRA2A-207ENST00000486934 LRP2P98164 4655 aa-0.07□□□□□ -2.42
TRA2A-207ENST00000486934 K7EMI3 77 aa-0.07□□□□□ -2.42
TRA2A-207ENST00000486934 CDC42BPGQ6DT37 1551 aa-0.07□□□□□ -2.42
TRA2A-207ENST00000486934 INO80Q9ULG1 1556 aaPredicted RBP-0.07□□□□□ -2.42
TRA2A-207ENST00000486934 KIAA0586Q9BVV6 1533 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 SSPOA2VEC9 5147 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 MINOS1Q5TGZ0 78 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 MYO5CQ9NQX4 1742 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 TRANK1O15050 2925 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 ASXL1Q8IXJ9 1541 aa-0.08□□□□□ -2.42
TRA2A-207ENST00000486934 COL6A3P12111 3177 aa-0.09□□□□□ -2.42
TRA2A-207ENST00000486934 ITSN1Q15811 1721 aa-0.09□□□□□ -2.42
TRA2A-207ENST00000486934 H3BNG1 76 aa-0.09□□□□□ -2.42
TRA2A-207ENST00000486934 SERF2P84101 59 aa-0.09□□□□□ -2.42
TRA2A-207ENST00000486934 A0A087WWC5 75 aa-0.1□□□□□ -2.43
TRA2A-207ENST00000486934 NCBP2-AS2Q69YL0 99 aa-0.1□□□□□ -2.43
TRA2A-207ENST00000486934 WT1-ASQ06250 92 aa-0.11□□□□□ -2.43
TRA2A-207ENST00000486934 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.11□□□□□ -2.43
TRA2A-207ENST00000486934 ZANQ9Y493 2812 aa-0.11□□□□□ -2.43
TRA2A-207ENST00000486934 NHSQ6T4R5 1651 aa-0.11□□□□□ -2.43
TRA2A-207ENST00000486934 IQGAP3Q86VI3 1631 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 RNF17Q9BXT8 1623 aaKnown RBP-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 LINC01549A6NIU2 74 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 H3BUA1 57 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 KRTAP6-2Q3LI66 62 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 DNMBPQ6XZF7 1577 aa-0.12□□□□□ -2.43
TRA2A-207ENST00000486934 EFCAB5A4FU69 1503 aa-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 ZC3H13Q5T200 1668 aaKnown RBP-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 DEFB106AQ8N104 65 aa-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 S4R3F8 94 aa-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 ABCC6O95255 1503 aa-0.13□□□□□ -2.43
TRA2A-207ENST00000486934 SPRR2EP22531 72 aa-0.14□□□□□ -2.43
TRA2A-207ENST00000486934 C6orf48Q9UBA6 75 aa-0.14□□□□□ -2.43
TRA2A-207ENST00000486934 TJP1Q07157 1748 aa-0.14□□□□□ -2.43
TRA2A-207ENST00000486934 LRRIQ1Q96JM4 1722 aa-0.14□□□□□ -2.43
TRA2A-207ENST00000486934 HECTD1Q9ULT8 2610 aa-0.15□□□□□ -2.43
TRA2A-207ENST00000486934 NMES1Q9C002 83 aa-0.15□□□□□ -2.43
TRA2A-207ENST00000486934 CREBBPQ92793 2442 aa-0.15□□□□□ -2.43
TRA2A-207ENST00000486934 TENM2Q9NT68 2774 aa-0.16□□□□□ -2.43
TRA2A-207ENST00000486934 ABCA9Q8IUA7 1624 aa-0.16□□□□□ -2.43
TRA2A-207ENST00000486934 AKAP13Q12802 2813 aa-0.16□□□□□ -2.43
TRA2A-207ENST00000486934 LRP1BQ9NZR2 4599 aa-0.16□□□□□ -2.43
TRA2A-207ENST00000486934 MACF1Q9UPN3 7388 aaKnown RBP-0.16□□□□□ -2.43
TRA2A-207ENST00000486934 SMIM31A0A1B0GVY4 71 aa-0.16□□□□□ -2.44
TRA2A-207ENST00000486934 MT1AP04731 61 aa-0.17□□□□□ -2.44
TRA2A-207ENST00000486934 RPS27P42677 84 aaKnown RBP-0.17□□□□□ -2.44
TRA2A-207ENST00000486934 RPS27LQ71UM5 84 aaKnown RBP-0.17□□□□□ -2.44
TRA2A-207ENST00000486934 NRAPQ86VF7 1730 aa-0.17□□□□□ -2.44
TRA2A-207ENST00000486934 S100ZQ8WXG8 99 aa-0.17□□□□□ -2.44
TRA2A-207ENST00000486934 NBASA2RRP1 2371 aa-0.18□□□□□ -2.44
TRA2A-207ENST00000486934 FCER1GP30273 86 aa-0.18□□□□□ -2.44
TRA2A-207ENST00000486934 PARP4Q9UKK3 1724 aaKnown RBP-0.18□□□□□ -2.44
TRA2A-207ENST00000486934 SMIM5Q71RC9 77 aa-0.19□□□□□ -2.44
TRA2A-207ENST00000486934 NOP10Q9NPE3 64 aaKnown RBP-0.19□□□□□ -2.44
TRA2A-207ENST00000486934 PKHD1P08F94 4074 aa-0.19□□□□□ -2.44
TRA2A-207ENST00000486934 SONP18583 2426 aaKnown RBP-0.19□□□□□ -2.44
TRA2A-207ENST00000486934 SPTBN4Q9H254 2564 aa-0.2□□□□□ -2.44
TRA2A-207ENST00000486934 SETD2Q9BYW2 2564 aaPredicted RBP-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 DSPP15924 2871 aaKnown RBP-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 KRTAP19-7Q3SYF9 63 aa-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 SRRM2Q9UQ35 2752 aaKnown RBP-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 C3P01024 1663 aa-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 TNRC18O15417 2968 aaPredicted RBP-0.21□□□□□ -2.44
TRA2A-207ENST00000486934 SVEP1Q4LDE5 3571 aa-0.22□□□□□ -2.44
TRA2A-207ENST00000486934 STAB2Q8WWQ8 2551 aa-0.22□□□□□ -2.44
TRA2A-207ENST00000486934 M0R1W7 72 aa-0.23□□□□□ -2.45
TRA2A-207ENST00000486934 TMEM167BQ9NRX6 74 aa-0.23□□□□□ -2.45
TRA2A-207ENST00000486934 NBEAL1Q6ZS30 2694 aa-0.23□□□□□ -2.45
TRA2A-207ENST00000486934 PDZD2O15018 2839 aa-0.23□□□□□ -2.45
TRA2A-207ENST00000486934 PRRC2CQ9Y520 2896 aaKnown RBP-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 MROH1Q8NDA8 1641 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 LYSTQ99698 3801 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 IGLV5-48A0A075B6I7 105 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 SPRR2FQ96RM1 72 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 CLASP1Q7Z460 1538 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 ITSN2Q9NZM3 1697 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 BPTFQ12830 3046 aa-0.24□□□□□ -2.45
TRA2A-207ENST00000486934 FLGP20930 4061 aaPredicted RBP-0.25□□□□□ -2.45
TRA2A-207ENST00000486934 MUC2Q02817 5179 aa-0.25□□□□□ -2.45
TRA2A-207ENST00000486934 MMP24-AS1A0A0U1RRL7 71 aa-0.25□□□□□ -2.45
TRA2A-207ENST00000486934 SPG11Q96JI7 2443 aa-0.25□□□□□ -2.45
TRA2A-207ENST00000486934 KIF1AQ12756 1690 aa-0.26□□□□□ -2.45
TRA2A-207ENST00000486934 ABRACLQ9P1F3 81 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms