RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 PKD1P98161 4303 aa13.3□□□□□ -0.28
TRADD-202ENST00000486556 SPRR1BP22528 89 aa13.29□□□□□ -0.28
TRADD-202ENST00000486556 C1orf137Q5JT78 98 aa13.28□□□□□ -0.28
TRADD-202ENST00000486556 DNAH8Q96JB1 4490 aa13.28□□□□□ -0.28
TRADD-202ENST00000486556 F8WEM9 126 aa13.26□□□□□ -0.29
TRADD-202ENST00000486556 SCXQ7RTU7 201 aa13.26□□□□□ -0.29
TRADD-202ENST00000486556 ZNF861PO60384 105 aa13.25□□□□□ -0.29
TRADD-202ENST00000486556 UBL5Q9BZL1 73 aa13.23□□□□□ -0.29
TRADD-202ENST00000486556 IGLV8-61A0A075B6I0 122 aa13.22□□□□□ -0.29
TRADD-202ENST00000486556 A0A1B0GW54 56 aa13.22□□□□□ -0.29
TRADD-202ENST00000486556 ZNF706Q9Y5V0 76 aaPredicted RBP13.2□□□□□ -0.3
TRADD-202ENST00000486556 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
TRADD-202ENST00000486556 KMT2CQ8NEZ4 4911 aaKnown RBP13.17□□□□□ -0.3
TRADD-202ENST00000486556 Q6JHZ5 121 aa13.17□□□□□ -0.3
TRADD-202ENST00000486556 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
TRADD-202ENST00000486556 A0A1B0GVY2 172 aa13.16□□□□□ -0.3
TRADD-202ENST00000486556 LINC00483Q53H64 154 aa13.15□□□□□ -0.3
TRADD-202ENST00000486556 FAM236AA0A1B0GUQ0 79 aa13.14□□□□□ -0.31
TRADD-202ENST00000486556 FAM236BA0A1B0GV22 79 aa13.14□□□□□ -0.31
TRADD-202ENST00000486556 A0A1W2PNM2 257 aa13.14□□□□□ -0.31
TRADD-202ENST00000486556 Q8NBF4 154 aa13.14□□□□□ -0.31
TRADD-202ENST00000486556 ATP5EP2Q5VTU8 51 aa13.13□□□□□ -0.31
TRADD-202ENST00000486556 IGFL1Q6UW32 110 aa13.12□□□□□ -0.31
TRADD-202ENST00000486556 Q6ZVQ6 151 aa13.12□□□□□ -0.31
TRADD-202ENST00000486556 CCDC179H3BU77 68 aa13.11□□□□□ -0.31
TRADD-202ENST00000486556 RYR2Q92736 4967 aa13.1□□□□□ -0.31
TRADD-202ENST00000486556 HAMPP81172 84 aa13.09□□□□□ -0.31
TRADD-202ENST00000486556 CRYGAP11844 174 aa13.09□□□□□ -0.31
TRADD-202ENST00000486556 IGKV3D-7A0A0C4DH55 119 aa13.07□□□□□ -0.32
TRADD-202ENST00000486556 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
TRADD-202ENST00000486556 NREPQ16612 68 aa13.06□□□□□ -0.32
TRADD-202ENST00000486556 SRRM2Q9UQ35 2752 aaKnown RBP13.05□□□□□ -0.32
TRADD-202ENST00000486556 RPL37AP61513 92 aaKnown RBP13.05□□□□□ -0.32
TRADD-202ENST00000486556 CXCL6P80162 114 aa13.02□□□□□ -0.32
TRADD-202ENST00000486556 A0A0G2JQZ4 141 aa13.01□□□□□ -0.33
TRADD-202ENST00000486556 LRP1BQ9NZR2 4599 aa13□□□□□ -0.33
TRADD-202ENST00000486556 IGLV9-49A0A0B4J1Y8 123 aa12.99□□□□□ -0.33
TRADD-202ENST00000486556 RYR3Q15413 4870 aa12.98□□□□□ -0.33
TRADD-202ENST00000486556 ATOX1O00244 68 aa12.97□□□□□ -0.33
TRADD-202ENST00000486556 C9orf153Q5TBE3 101 aa12.97□□□□□ -0.33
TRADD-202ENST00000486556 PKHD1P08F94 4074 aa12.96□□□□□ -0.33
TRADD-202ENST00000486556 ANAPC11Q9NYG5 84 aa12.95□□□□□ -0.34
TRADD-202ENST00000486556 UQCRQO14949 82 aa12.93□□□□□ -0.34
TRADD-202ENST00000486556 A0A087WSZ3 146 aa12.92□□□□□ -0.34
TRADD-202ENST00000486556 A0A087WVE0 104 aa12.92□□□□□ -0.34
TRADD-202ENST00000486556 BPY2O14599 106 aa12.92□□□□□ -0.34
TRADD-202ENST00000486556 DYNC1H1Q14204 4646 aaKnown RBP12.91□□□□□ -0.34
TRADD-202ENST00000486556 COX7CP15954 63 aa12.91□□□□□ -0.34
TRADD-202ENST00000486556 MOBPQ13875 183 aa12.9□□□□□ -0.34
TRADD-202ENST00000486556 SS18L2Q9UHA2 77 aa12.9□□□□□ -0.34
TRADD-202ENST00000486556 SSBP3-AS1Q7Z2R9 100 aa12.87□□□□□ -0.35
TRADD-202ENST00000486556 FAM229BQ4G0N7 80 aa12.86□□□□□ -0.35
TRADD-202ENST00000486556 SPINK6Q6UWN8 80 aa12.84□□□□□ -0.35
TRADD-202ENST00000486556 VPS13BQ7Z7G8 4022 aa12.84□□□□□ -0.35
TRADD-202ENST00000486556 SERP2Q8N6R1 65 aa12.83□□□□□ -0.35
TRADD-202ENST00000486556 SMR3BP02814 79 aaPredicted RBP12.81□□□□□ -0.36
TRADD-202ENST00000486556 KRTAP1-4P0C5Y4 121 aa12.79□□□□□ -0.36
TRADD-202ENST00000486556 CD164Q04900 197 aa12.78□□□□□ -0.36
TRADD-202ENST00000486556 APOBP04114 4563 aaKnown RBP12.76□□□□□ -0.37
TRADD-202ENST00000486556 A0A087X002 238 aa12.76□□□□□ -0.37
TRADD-202ENST00000486556 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
TRADD-202ENST00000486556 DSCR10P59022 87 aa12.76□□□□□ -0.37
TRADD-202ENST00000486556 LINC00472Q9H8W2 130 aa12.76□□□□□ -0.37
TRADD-202ENST00000486556 HRCT1Q6UXD1 115 aa12.76□□□□□ -0.37
TRADD-202ENST00000486556 Q8N9L7 120 aa12.74□□□□□ -0.37
TRADD-202ENST00000486556 PLA2G1BP04054 148 aaKnown RBP12.74□□□□□ -0.37
TRADD-202ENST00000486556 KRTAP13-2Q52LG2 175 aa12.74□□□□□ -0.37
TRADD-202ENST00000486556 J3KT08 172 aa12.71□□□□□ -0.38
TRADD-202ENST00000486556 KRTAP10-4P60372 401 aaPredicted RBP12.71□□□□□ -0.38
TRADD-202ENST00000486556 DEFB116Q30KQ4 102 aa12.71□□□□□ -0.38
TRADD-202ENST00000486556 K7EQZ3 153 aa12.67□□□□□ -0.38
TRADD-202ENST00000486556 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
TRADD-202ENST00000486556 Q96NJ1 140 aa12.65□□□□□ -0.38
TRADD-202ENST00000486556 SMIM20Q8N5G0 67 aa12.65□□□□□ -0.39
TRADD-202ENST00000486556 A8MWP4 228 aa12.64□□□□□ -0.39
TRADD-202ENST00000486556 TRAV7A0A075B6U4 112 aa12.62□□□□□ -0.39
TRADD-202ENST00000486556 FAM229AH3BQW9 127 aa12.62□□□□□ -0.39
TRADD-202ENST00000486556 TYMSOSQ8TAI1 123 aa12.62□□□□□ -0.39
TRADD-202ENST00000486556 CYSTM1Q9H1C7 97 aa12.61□□□□□ -0.39
TRADD-202ENST00000486556 ASB16-AS1Q495Z4 193 aa12.6□□□□□ -0.39
TRADD-202ENST00000486556 PRR15Q8IV56 129 aa12.6□□□□□ -0.39
TRADD-202ENST00000486556 NDUFB1O75438 58 aa12.6□□□□□ -0.39
TRADD-202ENST00000486556 Q5XG85 94 aa12.6□□□□□ -0.39
TRADD-202ENST00000486556 FAT1Q14517 4588 aa12.59□□□□□ -0.39
TRADD-202ENST00000486556 HCG22E2RYF7 251 aa12.56□□□□□ -0.4
TRADD-202ENST00000486556 C4orf48Q5BLP8 95 aa12.55□□□□□ -0.4
TRADD-202ENST00000486556 TMEM258P61165 79 aa12.55□□□□□ -0.4
TRADD-202ENST00000486556 PRR26Q8N8Z3 221 aa12.54□□□□□ -0.4
TRADD-202ENST00000486556 EPPK1P58107 5090 aaKnown RBP12.53□□□□□ -0.4
TRADD-202ENST00000486556 SPINK1P00995 79 aa12.52□□□□□ -0.41
TRADD-202ENST00000486556 LIMD2Q9BT23 127 aa12.52□□□□□ -0.41
TRADD-202ENST00000486556 C20orf197Q8N268 126 aa12.5□□□□□ -0.41
TRADD-202ENST00000486556 SPAG11AQ6PDA7 123 aa12.49□□□□□ -0.41
TRADD-202ENST00000486556 Q5VSD8 79 aa12.48□□□□□ -0.41
TRADD-202ENST00000486556 RPS28P62857 69 aaKnown RBP12.47□□□□□ -0.41
TRADD-202ENST00000486556 A0A1B0GVX0 72 aa12.46□□□□□ -0.41
TRADD-202ENST00000486556 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.42
TRADD-202ENST00000486556 RPS29P62273 56 aaKnown RBP12.46□□□□□ -0.42
TRADD-202ENST00000486556 LINC00304Q8N9R0 145 aa12.46□□□□□ -0.42
TRADD-202ENST00000486556 OCR1Q9BZK8 76 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms