RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 LINC00587B1AMM8 73 aa3.83□□□□□ -1.8
XRN1-212ENST00000486211 MT1BP07438 61 aa3.83□□□□□ -1.8
XRN1-212ENST00000486211 HINT1P49773 126 aaPredicted RBP3.83□□□□□ -1.8
XRN1-212ENST00000486211 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
XRN1-212ENST00000486211 MAP1LC3CQ9BXW4 147 aa3.83□□□□□ -1.8
XRN1-212ENST00000486211 IGLV5-48A0A075B6I7 105 aa3.81□□□□□ -1.8
XRN1-212ENST00000486211 ELOF1P60002 83 aaKnown RBP3.81□□□□□ -1.8
XRN1-212ENST00000486211 BAGE3Q86Y29 109 aa3.81□□□□□ -1.8
XRN1-212ENST00000486211 HBDP02042 147 aa3.8□□□□□ -1.8
XRN1-212ENST00000486211 RGS21Q2M5E4 152 aa3.8□□□□□ -1.8
XRN1-212ENST00000486211 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
XRN1-212ENST00000486211 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
XRN1-212ENST00000486211 TRBV7-7A0A0K0K1E9 115 aa3.79□□□□□ -1.8
XRN1-212ENST00000486211 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
XRN1-212ENST00000486211 TSPEAR-AS2P59090 65 aa3.78□□□□□ -1.8
XRN1-212ENST00000486211 MIEN1Q9BRT3 115 aa3.78□□□□□ -1.8
XRN1-212ENST00000486211 RPS10P5Q9NQ39 176 aa3.78□□□□□ -1.8
XRN1-212ENST00000486211 CBY1Q9Y3M2 126 aa3.78□□□□□ -1.8
XRN1-212ENST00000486211 COX7BP24311 80 aa3.77□□□□□ -1.81
XRN1-212ENST00000486211 COMMD7Q86VX2 200 aa3.77□□□□□ -1.81
XRN1-212ENST00000486211 TCTE3Q8IZS6 198 aa3.77□□□□□ -1.81
XRN1-212ENST00000486211 SMCO4Q9NRQ5 59 aa3.77□□□□□ -1.81
XRN1-212ENST00000486211 MTURNQ8N3F0 131 aa3.76□□□□□ -1.81
XRN1-212ENST00000486211 SPRR2DP22532 72 aa3.75□□□□□ -1.81
XRN1-212ENST00000486211 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
XRN1-212ENST00000486211 NPC2P61916 151 aa3.74□□□□□ -1.81
XRN1-212ENST00000486211 PEA15Q15121 130 aa3.74□□□□□ -1.81
XRN1-212ENST00000486211 RHEBQ15382 184 aa3.74□□□□□ -1.81
XRN1-212ENST00000486211 PMCHL1Q16048 86 aa3.74□□□□□ -1.81
XRN1-212ENST00000486211 LST1O00453 97 aa3.73□□□□□ -1.81
XRN1-212ENST00000486211 DSCR10P59022 87 aa3.73□□□□□ -1.81
XRN1-212ENST00000486211 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
XRN1-212ENST00000486211 TRAV12-1A0A0B4J245 112 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 MT-ND4LP03901 98 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 IFITM2Q01629 132 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 Q5VV11 94 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 OR13C6PQ8NH95 151 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
XRN1-212ENST00000486211 TRBV7-6A0A0J9YX20 115 aa3.71□□□□□ -1.82
XRN1-212ENST00000486211 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
XRN1-212ENST00000486211 LEPROTO15243 131 aa3.7□□□□□ -1.82
XRN1-212ENST00000486211 Q6JHZ5 121 aa3.7□□□□□ -1.82
XRN1-212ENST00000486211 SPANXDQ9BXN6 97 aa3.7□□□□□ -1.82
XRN1-212ENST00000486211 SPANXCQ9NY87 97 aa3.7□□□□□ -1.82
XRN1-212ENST00000486211 LINC00614P0C842 121 aa3.69□□□□□ -1.82
XRN1-212ENST00000486211 F8WEM9 126 aa3.68□□□□□ -1.82
XRN1-212ENST00000486211 J3QQQ9 107 aa3.68□□□□□ -1.82
XRN1-212ENST00000486211 A0A1B0GWB2 263 aa3.67□□□□□ -1.82
XRN1-212ENST00000486211 NMUP48645 174 aa3.67□□□□□ -1.82
XRN1-212ENST00000486211 C18orf32Q8TCD1 76 aa3.67□□□□□ -1.82
XRN1-212ENST00000486211 A0A0J9YXY3 114 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 Q6ZVQ6 151 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 LINC00308Q8TCZ7 52 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 IFI27L1Q96BM0 104 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 FAM218AQ96MZ4 157 aa3.66□□□□□ -1.82
XRN1-212ENST00000486211 ZNF815PA8K554 130 aa3.65□□□□□ -1.83
XRN1-212ENST00000486211 FABP9Q0Z7S8 132 aa3.65□□□□□ -1.83
XRN1-212ENST00000486211 LITAFQ99732 161 aa3.65□□□□□ -1.83
XRN1-212ENST00000486211 SPRR2GQ9BYE4 73 aa3.65□□□□□ -1.83
XRN1-212ENST00000486211 H0Y8G0 127 aa3.64□□□□□ -1.83
XRN1-212ENST00000486211 SPINK7P58062 85 aa3.64□□□□□ -1.83
XRN1-212ENST00000486211 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
XRN1-212ENST00000486211 SEC11CQ9BY50 192 aa3.64□□□□□ -1.83
XRN1-212ENST00000486211 TRAV13-2A0A0B4J235 113 aa3.63□□□□□ -1.83
XRN1-212ENST00000486211 COLCA2A8K830 154 aa3.63□□□□□ -1.83
XRN1-212ENST00000486211 LINC00313P59037 77 aa3.63□□□□□ -1.83
XRN1-212ENST00000486211 SS18L2Q9UHA2 77 aa3.62□□□□□ -1.83
XRN1-212ENST00000486211 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
XRN1-212ENST00000486211 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
XRN1-212ENST00000486211 NHP2Q9NX24 153 aaKnown RBP3.61□□□□□ -1.83
XRN1-212ENST00000486211 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
XRN1-212ENST00000486211 COX19Q49B96 90 aa3.6□□□□□ -1.83
XRN1-212ENST00000486211 H3BUT2 72 aa3.59□□□□□ -1.83
XRN1-212ENST00000486211 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
XRN1-212ENST00000486211 SLC7A5P1Q8MH63 180 aa3.59□□□□□ -1.83
XRN1-212ENST00000486211 HERVK_113P61574 105 aa3.58□□□□□ -1.84
XRN1-212ENST00000486211 Q6ZQY7 126 aa3.58□□□□□ -1.84
XRN1-212ENST00000486211 SIGMAR1Q99720 223 aa3.58□□□□□ -1.84
XRN1-212ENST00000486211 A0A087WSZ3 146 aa3.57□□□□□ -1.84
XRN1-212ENST00000486211 TIMM17BO60830 172 aa3.57□□□□□ -1.84
XRN1-212ENST00000486211 PLNP26678 52 aa3.57□□□□□ -1.84
XRN1-212ENST00000486211 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
XRN1-212ENST00000486211 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
XRN1-212ENST00000486211 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
XRN1-212ENST00000486211 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
XRN1-212ENST00000486211 SERF1AO75920 110 aa3.55□□□□□ -1.84
XRN1-212ENST00000486211 S100PP25815 95 aa3.55□□□□□ -1.84
XRN1-212ENST00000486211 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
XRN1-212ENST00000486211 IMUPQ9GZP8 106 aa3.55□□□□□ -1.84
XRN1-212ENST00000486211 E9PLD3 99 aa3.54□□□□□ -1.84
XRN1-212ENST00000486211 DPM2O94777 84 aa3.54□□□□□ -1.84
XRN1-212ENST00000486211 SEC61GP60059 68 aa3.54□□□□□ -1.84
XRN1-212ENST00000486211 TEN1Q86WV5 123 aa3.54□□□□□ -1.84
XRN1-212ENST00000486211 SMIM11BQ8TCY0 68 aa3.54□□□□□ -1.84
XRN1-212ENST00000486211 CHCHD1Q96BP2 118 aaKnown RBP3.54□□□□□ -1.84
XRN1-212ENST00000486211 PMCHL2Q9BQD1 86 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms