RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 CNFNQ9BYD5 112 aa5.12□□□□□ -1.59
DDX39B-221ENST00000484566 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.11□□□□□ -1.59
DDX39B-221ENST00000484566 A0A087WZ39 114 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 TRBV7-6A0A0J9YX20 115 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 IGKV2-29A2NJV5 120 aaPredicted RBP5.11□□□□□ -1.59
DDX39B-221ENST00000484566 C11orf86A6NJI1 115 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 TOMM6Q96B49 74 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 CAMK2N2Q96S95 79 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 TIMM21Q9BVV7 248 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
DDX39B-221ENST00000484566 IGLV4-69A0A075B6H9 119 aa5.1□□□□□ -1.59
DDX39B-221ENST00000484566 SS18Q15532 418 aa5.1□□□□□ -1.59
DDX39B-221ENST00000484566 NRACQ8N912 160 aa5.1□□□□□ -1.59
DDX39B-221ENST00000484566 LINC00959A0A1B0GUT2 108 aa5.09□□□□□ -1.59
DDX39B-221ENST00000484566 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
DDX39B-221ENST00000484566 CD164L2Q6UWJ8 174 aa5.09□□□□□ -1.59
DDX39B-221ENST00000484566 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
DDX39B-221ENST00000484566 H7C2G1 150 aa5.08□□□□□ -1.6
DDX39B-221ENST00000484566 LEPROTO15243 131 aa5.08□□□□□ -1.6
DDX39B-221ENST00000484566 SMCR5Q8TEV8 140 aa5.08□□□□□ -1.6
DDX39B-221ENST00000484566 TRBV10-3A0A0K0K1G6 114 aa5.07□□□□□ -1.6
DDX39B-221ENST00000484566 SMKR1H3BMG3 65 aa5.07□□□□□ -1.6
DDX39B-221ENST00000484566 COX7A2LO14548 114 aa5.07□□□□□ -1.6
DDX39B-221ENST00000484566 DNAL4O96015 105 aa5.07□□□□□ -1.6
DDX39B-221ENST00000484566 SMIM2Q9BVW6 85 aa5.07□□□□□ -1.6
DDX39B-221ENST00000484566 TRAV7A0A075B6U4 112 aa5.06□□□□□ -1.6
DDX39B-221ENST00000484566 IGLV5-39A0A0G2JS06 123 aa5.06□□□□□ -1.6
DDX39B-221ENST00000484566 TIMM17BO60830 172 aa5.06□□□□□ -1.6
DDX39B-221ENST00000484566 UBE2BP63146 152 aa5.06□□□□□ -1.6
DDX39B-221ENST00000484566 RBM3P98179 157 aaKnown RBP5.06□□□□□ -1.6
DDX39B-221ENST00000484566 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
DDX39B-221ENST00000484566 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
DDX39B-221ENST00000484566 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
DDX39B-221ENST00000484566 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
DDX39B-221ENST00000484566 RPL39LQ96EH5 51 aaKnown RBP5.05□□□□□ -1.6
DDX39B-221ENST00000484566 OPRPNQ99935 248 aaPredicted RBP5.05□□□□□ -1.6
DDX39B-221ENST00000484566 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
DDX39B-221ENST00000484566 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 I3L3M4 83 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 CCKP06307 115 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 TIMM17AQ99595 171 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 CDC42SE2Q9NRR3 84 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 UBE2D4Q9Y2X8 147 aa5.04□□□□□ -1.6
DDX39B-221ENST00000484566 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
DDX39B-221ENST00000484566 H7BZZ5 65 aa5.03□□□□□ -1.6
DDX39B-221ENST00000484566 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
DDX39B-221ENST00000484566 C2orf66Q6UXQ4 117 aa5.03□□□□□ -1.6
DDX39B-221ENST00000484566 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
DDX39B-221ENST00000484566 TRAV13-2A0A0B4J235 113 aa5.02□□□□□ -1.61
DDX39B-221ENST00000484566 PRSS2P07478 247 aa5.02□□□□□ -1.61
DDX39B-221ENST00000484566 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
DDX39B-221ENST00000484566 TRBV6-5A0A0K0K1A5 114 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 NDUFA1O15239 70 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 NDUFS5O43920 106 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 VPREB1P12018 145 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 AMELXQ99217 191 aa5.01□□□□□ -1.61
DDX39B-221ENST00000484566 ZNF861PO60384 105 aa5□□□□□ -1.61
DDX39B-221ENST00000484566 TSHBP01222 138 aa5□□□□□ -1.61
DDX39B-221ENST00000484566 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
DDX39B-221ENST00000484566 TPRXLQ17RH7 258 aa5□□□□□ -1.61
DDX39B-221ENST00000484566 CLEC2BQ92478 149 aa5□□□□□ -1.61
DDX39B-221ENST00000484566 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
DDX39B-221ENST00000484566 IGIPA6NJ69 53 aa4.99□□□□□ -1.61
DDX39B-221ENST00000484566 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
DDX39B-221ENST00000484566 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
DDX39B-221ENST00000484566 TRBV27A0A0K0K1C4 114 aa4.98□□□□□ -1.61
DDX39B-221ENST00000484566 ERC2-IT1O76042 136 aa4.98□□□□□ -1.61
DDX39B-221ENST00000484566 RNASE13Q5GAN3 156 aaKnown RBP4.98□□□□□ -1.61
DDX39B-221ENST00000484566 KTN1-AS1Q86SY8 53 aa4.98□□□□□ -1.61
DDX39B-221ENST00000484566 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
DDX39B-221ENST00000484566 A0A087X002 238 aa4.97□□□□□ -1.61
DDX39B-221ENST00000484566 C6orf48Q9UBA6 75 aa4.97□□□□□ -1.61
DDX39B-221ENST00000484566 SSPOA2VEC9 5147 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 F8WEM9 126 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 VCYO14598 125 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 RPL28P46779 137 aaKnown RBP4.96□□□□□ -1.62
DDX39B-221ENST00000484566 TSPEAR-AS2P59090 65 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.62
DDX39B-221ENST00000484566 H0YGX0 51 aa4.95□□□□□ -1.62
DDX39B-221ENST00000484566 POLR2KP53803 58 aaKnown RBP4.95□□□□□ -1.62
DDX39B-221ENST00000484566 Q1T7F1 81 aa4.95□□□□□ -1.62
DDX39B-221ENST00000484566 KRTAP7-1Q8IUC3 87 aa4.95□□□□□ -1.62
DDX39B-221ENST00000484566 LINC00304Q8N9R0 145 aa4.95□□□□□ -1.62
DDX39B-221ENST00000484566 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
DDX39B-221ENST00000484566 JMJD7-PLA2G4BH0Y9G9 81 aa4.94□□□□□ -1.62
DDX39B-221ENST00000484566 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
DDX39B-221ENST00000484566 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
DDX39B-221ENST00000484566 TRAV23DV6A0A075B6W5 121 aa4.93□□□□□ -1.62
DDX39B-221ENST00000484566 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
DDX39B-221ENST00000484566 LITAFQ99732 161 aa4.93□□□□□ -1.62
DDX39B-221ENST00000484566 LINC00846Q9NV44 126 aa4.93□□□□□ -1.62
DDX39B-221ENST00000484566 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
DDX39B-221ENST00000484566 A0A087WVE0 104 aa4.92□□□□□ -1.62
DDX39B-221ENST00000484566 IGHV3OR16-9A0A0B4J2B5 98 aa4.92□□□□□ -1.62
DDX39B-221ENST00000484566 NDUFA12Q9UI09 145 aa4.92□□□□□ -1.62
DDX39B-221ENST00000484566 C22orf24Q9Y442 160 aa4.91□□□□□ -1.62
DDX39B-221ENST00000484566 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
DDX39B-221ENST00000484566 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms