RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CFC1BP0CG36 223 aa6.79□□□□□ -1.32
MSH5-216ENST00000484309 CFC1P0CG37 223 aa6.79□□□□□ -1.32
MSH5-216ENST00000484309 CD164Q04900 197 aa6.79□□□□□ -1.32
MSH5-216ENST00000484309 RAB37Q96AX2 223 aa6.79□□□□□ -1.32
MSH5-216ENST00000484309 HIGD1BQ9P298 99 aa6.79□□□□□ -1.32
MSH5-216ENST00000484309 F8WEM9 126 aa6.78□□□□□ -1.32
MSH5-216ENST00000484309 XP32Q5T750 250 aa6.78□□□□□ -1.32
MSH5-216ENST00000484309 C9orf92A6NGG3 77 aa6.77□□□□□ -1.33
MSH5-216ENST00000484309 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
MSH5-216ENST00000484309 BVES-AS1Q5T3Y7 98 aa6.77□□□□□ -1.33
MSH5-216ENST00000484309 PYY3Q5JQD4 70 aa6.75□□□□□ -1.33
MSH5-216ENST00000484309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.75□□□□□ -1.33
MSH5-216ENST00000484309 CEND1Q8N111 149 aa6.75□□□□□ -1.33
MSH5-216ENST00000484309 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
MSH5-216ENST00000484309 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
MSH5-216ENST00000484309 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
MSH5-216ENST00000484309 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
MSH5-216ENST00000484309 FXYD2P54710 66 aa6.73□□□□□ -1.33
MSH5-216ENST00000484309 C1orf195Q5TG92 126 aa6.73□□□□□ -1.33
MSH5-216ENST00000484309 FAM218AQ96MZ4 157 aa6.73□□□□□ -1.33
MSH5-216ENST00000484309 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
MSH5-216ENST00000484309 Q5XG85 94 aa6.72□□□□□ -1.33
MSH5-216ENST00000484309 IGFL1Q6UW32 110 aa6.72□□□□□ -1.33
MSH5-216ENST00000484309 H3BUT2 72 aa6.71□□□□□ -1.34
MSH5-216ENST00000484309 OCIAD2Q56VL3 154 aa6.71□□□□□ -1.34
MSH5-216ENST00000484309 CLEC2BQ92478 149 aa6.71□□□□□ -1.34
MSH5-216ENST00000484309 SNHG12Q9BXW3 62 aa6.71□□□□□ -1.34
MSH5-216ENST00000484309 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
MSH5-216ENST00000484309 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
MSH5-216ENST00000484309 A6NJY4 79 aa6.7□□□□□ -1.34
MSH5-216ENST00000484309 Q6JHZ5 121 aa6.7□□□□□ -1.34
MSH5-216ENST00000484309 PRO1854Q9UHT4 67 aa6.7□□□□□ -1.34
MSH5-216ENST00000484309 H0YGX0 51 aa6.69□□□□□ -1.34
MSH5-216ENST00000484309 TCL1BO95988 128 aa6.69□□□□□ -1.34
MSH5-216ENST00000484309 TRBV7-7A0A0K0K1E9 115 aa6.68□□□□□ -1.34
MSH5-216ENST00000484309 K7ERJ3 54 aa6.68□□□□□ -1.34
MSH5-216ENST00000484309 PPDPFLQ8WWR9 84 aa6.68□□□□□ -1.34
MSH5-216ENST00000484309 HSD52Q0P140 79 aa6.67□□□□□ -1.34
MSH5-216ENST00000484309 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
MSH5-216ENST00000484309 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
MSH5-216ENST00000484309 TRIAP1O43715 76 aa6.66□□□□□ -1.34
MSH5-216ENST00000484309 SNCGO76070 127 aa6.66□□□□□ -1.34
MSH5-216ENST00000484309 NDUFV3P56181 108 aaKnown RBP6.64□□□□□ -1.35
MSH5-216ENST00000484309 FABP2P12104 132 aa6.63□□□□□ -1.35
MSH5-216ENST00000484309 UQCR10Q9UDW1 63 aa6.63□□□□□ -1.35
MSH5-216ENST00000484309 PSMB2P49721 201 aa6.62□□□□□ -1.35
MSH5-216ENST00000484309 A0A1B0GX51 115 aa6.61□□□□□ -1.35
MSH5-216ENST00000484309 LCE2CQ5TA81 110 aa6.61□□□□□ -1.35
MSH5-216ENST00000484309 A0A1B0GV72 72 aa6.6□□□□□ -1.35
MSH5-216ENST00000484309 H3BMG7 143 aa6.6□□□□□ -1.35
MSH5-216ENST00000484309 SVIPQ8NHG7 77 aa6.6□□□□□ -1.35
MSH5-216ENST00000484309 LST1O00453 97 aa6.59□□□□□ -1.35
MSH5-216ENST00000484309 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
MSH5-216ENST00000484309 DNAL4O96015 105 aa6.58□□□□□ -1.36
MSH5-216ENST00000484309 A0A087WSZ3 146 aa6.57□□□□□ -1.36
MSH5-216ENST00000484309 Q6Q795 121 aa6.57□□□□□ -1.36
MSH5-216ENST00000484309 TEN1Q86WV5 123 aa6.57□□□□□ -1.36
MSH5-216ENST00000484309 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
MSH5-216ENST00000484309 GHRHP01286 108 aa6.56□□□□□ -1.36
MSH5-216ENST00000484309 COX6CP09669 75 aa6.56□□□□□ -1.36
MSH5-216ENST00000484309 SMIM6P0DI80 62 aa6.56□□□□□ -1.36
MSH5-216ENST00000484309 OBSCN-AS1Q96MR7 158 aa6.56□□□□□ -1.36
MSH5-216ENST00000484309 SS18L2Q9UHA2 77 aa6.56□□□□□ -1.36
MSH5-216ENST00000484309 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
MSH5-216ENST00000484309 A0A1W2PNM2 257 aa6.54□□□□□ -1.36
MSH5-216ENST00000484309 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
MSH5-216ENST00000484309 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
MSH5-216ENST00000484309 SCGB1C2P0DMR2 95 aa6.52□□□□□ -1.37
MSH5-216ENST00000484309 ANKRD29Q8N6D5 301 aa6.52□□□□□ -1.37
MSH5-216ENST00000484309 Q96NJ1 140 aa6.51□□□□□ -1.37
MSH5-216ENST00000484309 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
MSH5-216ENST00000484309 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
MSH5-216ENST00000484309 SIGMAR1Q99720 223 aa6.49□□□□□ -1.37
MSH5-216ENST00000484309 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
MSH5-216ENST00000484309 H3BQ85 93 aa6.48□□□□□ -1.37
MSH5-216ENST00000484309 TRACP01848 142 aa6.48□□□□□ -1.37
MSH5-216ENST00000484309 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
MSH5-216ENST00000484309 DSCR10P59022 87 aa6.47□□□□□ -1.37
MSH5-216ENST00000484309 Q75L30 129 aa6.47□□□□□ -1.37
MSH5-216ENST00000484309 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 M0R143 59 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 CCKP06307 115 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 UBE2V1Q13404 147 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 ATP11AUNQ6ZP68 121 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 VPS25Q9BRG1 176 aa6.46□□□□□ -1.38
MSH5-216ENST00000484309 MT1HP80294 61 aa6.45□□□□□ -1.38
MSH5-216ENST00000484309 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
MSH5-216ENST00000484309 IGKV4-1P06312 121 aa6.44□□□□□ -1.38
MSH5-216ENST00000484309 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
MSH5-216ENST00000484309 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
MSH5-216ENST00000484309 PCP4P48539 62 aa6.42□□□□□ -1.38
MSH5-216ENST00000484309 RBM3P98179 157 aaKnown RBP6.42□□□□□ -1.38
MSH5-216ENST00000484309 A8MUU9 505 aa6.41□□□□□ -1.38
MSH5-216ENST00000484309 C20orf166-AS1Q96NR2 134 aa6.41□□□□□ -1.38
MSH5-216ENST00000484309 BATFQ16520 125 aa6.4□□□□□ -1.38
MSH5-216ENST00000484309 DSCR8Q96T75 97 aa6.4□□□□□ -1.38
MSH5-216ENST00000484309 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
MSH5-216ENST00000484309 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
MSH5-216ENST00000484309 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
MSH5-216ENST00000484309 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms