RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 AGLP35573 1532 aa0.82□□□□□ -2.28
PTCD3-214ENST00000483925 TENM4Q6N022 2769 aa0.82□□□□□ -2.28
PTCD3-214ENST00000483925 M0R2T5 61 aa0.81□□□□□ -2.28
PTCD3-214ENST00000483925 DEFB135Q30KP9 77 aa0.8□□□□□ -2.28
PTCD3-214ENST00000483925 ABCA5Q8WWZ7 1642 aa0.78□□□□□ -2.28
PTCD3-214ENST00000483925 RPS27P42677 84 aaKnown RBP0.78□□□□□ -2.28
PTCD3-214ENST00000483925 RPS27LQ71UM5 84 aaKnown RBP0.78□□□□□ -2.28
PTCD3-214ENST00000483925 H0YGG7 62 aa0.77□□□□□ -2.29
PTCD3-214ENST00000483925 LINC00308Q8TCZ7 52 aa0.77□□□□□ -2.29
PTCD3-214ENST00000483925 WNK2Q9Y3S1 2297 aa0.77□□□□□ -2.29
PTCD3-214ENST00000483925 BPTFQ12830 3046 aa0.77□□□□□ -2.29
PTCD3-214ENST00000483925 NRXN3Q9Y4C0 1643 aa0.76□□□□□ -2.29
PTCD3-214ENST00000483925 WT1-ASQ06250 92 aa0.76□□□□□ -2.29
PTCD3-214ENST00000483925 ALMS1Q8TCU4 4167 aa0.75□□□□□ -2.29
PTCD3-214ENST00000483925 CDC42BPAQ5VT25 1732 aa0.75□□□□□ -2.29
PTCD3-214ENST00000483925 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
PTCD3-214ENST00000483925 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
PTCD3-214ENST00000483925 REV3LO60673 3130 aa0.74□□□□□ -2.29
PTCD3-214ENST00000483925 VWFP04275 2813 aa0.74□□□□□ -2.29
PTCD3-214ENST00000483925 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
PTCD3-214ENST00000483925 TOGARAM1Q9Y4F4 1720 aa0.73□□□□□ -2.29
PTCD3-214ENST00000483925 HUWE1Q7Z6Z7 4374 aaKnown RBP0.73□□□□□ -2.29
PTCD3-214ENST00000483925 H3BUA1 57 aa0.73□□□□□ -2.29
PTCD3-214ENST00000483925 BSNQ9UPA5 3926 aa0.73□□□□□ -2.29
PTCD3-214ENST00000483925 ANKRD36CQ5JPF3 1778 aa0.73□□□□□ -2.29
PTCD3-214ENST00000483925 PRKDCP78527 4128 aaKnown RBP0.72□□□□□ -2.29
PTCD3-214ENST00000483925 CHD6Q8TD26 2715 aa0.72□□□□□ -2.29
PTCD3-214ENST00000483925 PRLHP81277 87 aa0.72□□□□□ -2.29
PTCD3-214ENST00000483925 DEFB106AQ8N104 65 aa0.72□□□□□ -2.29
PTCD3-214ENST00000483925 KNL1Q8NG31 2342 aa0.72□□□□□ -2.29
PTCD3-214ENST00000483925 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
PTCD3-214ENST00000483925 PRM1P04553 51 aa0.71□□□□□ -2.3
PTCD3-214ENST00000483925 S4R3F8 94 aa0.71□□□□□ -2.3
PTCD3-214ENST00000483925 ABCA2Q9BZC7 2435 aa0.71□□□□□ -2.3
PTCD3-214ENST00000483925 TNXBP22105 4242 aa0.7□□□□□ -2.3
PTCD3-214ENST00000483925 SMIM27A0A1W2PRY6 76 aa0.69□□□□□ -2.3
PTCD3-214ENST00000483925 LINC01546A6NGU7 62 aa0.69□□□□□ -2.3
PTCD3-214ENST00000483925 ABRACLQ9P1F3 81 aa0.69□□□□□ -2.3
PTCD3-214ENST00000483925 ATRQ13535 2644 aa0.69□□□□□ -2.3
PTCD3-214ENST00000483925 SPTA1P02549 2419 aa0.69□□□□□ -2.3
PTCD3-214ENST00000483925 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
PTCD3-214ENST00000483925 PTPN13Q12923 2485 aa0.68□□□□□ -2.3
PTCD3-214ENST00000483925 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
PTCD3-214ENST00000483925 LRP1Q07954 4544 aaKnown RBP0.67□□□□□ -2.3
PTCD3-214ENST00000483925 TIMM8BQ9Y5J9 83 aaPredicted RBP0.67□□□□□ -2.3
PTCD3-214ENST00000483925 IQGAP2Q13576 1575 aa0.66□□□□□ -2.3
PTCD3-214ENST00000483925 PDE4DIPQ5VU43 2346 aa0.66□□□□□ -2.3
PTCD3-214ENST00000483925 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
PTCD3-214ENST00000483925 TRANK1O15050 2925 aa0.66□□□□□ -2.3
PTCD3-214ENST00000483925 TOMM5Q8N4H5 51 aa0.66□□□□□ -2.3
PTCD3-214ENST00000483925 AHNAK2Q8IVF2 5795 aa0.65□□□□□ -2.3
PTCD3-214ENST00000483925 OTOGQ6ZRI0 2925 aa0.65□□□□□ -2.31
PTCD3-214ENST00000483925 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.31
PTCD3-214ENST00000483925 EP300Q09472 2414 aaPredicted RBP0.64□□□□□ -2.31
PTCD3-214ENST00000483925 IGF2RP11717 2491 aa0.63□□□□□ -2.31
PTCD3-214ENST00000483925 TOP2AP11388 1531 aaKnown RBP0.63□□□□□ -2.31
PTCD3-214ENST00000483925 LPAP08519 4548 aa0.63□□□□□ -2.31
PTCD3-214ENST00000483925 GCC2Q8IWJ2 1684 aa0.62□□□□□ -2.31
PTCD3-214ENST00000483925 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
PTCD3-214ENST00000483925 NCOR1O75376 2440 aa0.62□□□□□ -2.31
PTCD3-214ENST00000483925 SPRR2DP22532 72 aa0.62□□□□□ -2.31
PTCD3-214ENST00000483925 TRPM2O94759 1503 aa0.62□□□□□ -2.31
PTCD3-214ENST00000483925 A0A1B0GUL6 1792 aa0.62□□□□□ -2.31
PTCD3-214ENST00000483925 CHD8Q9HCK8 2581 aa0.61□□□□□ -2.31
PTCD3-214ENST00000483925 NOP10Q9NPE3 64 aaKnown RBP0.61□□□□□ -2.31
PTCD3-214ENST00000483925 FAM208AQ9UK61 1670 aaKnown RBP0.61□□□□□ -2.31
PTCD3-214ENST00000483925 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
PTCD3-214ENST00000483925 KIF21BO75037 1637 aa0.6□□□□□ -2.31
PTCD3-214ENST00000483925 MYCBP2O75592 4640 aa0.6□□□□□ -2.31
PTCD3-214ENST00000483925 IQGAP1P46940 1657 aa0.59□□□□□ -2.31
PTCD3-214ENST00000483925 DUOX1Q9NRD9 1551 aa0.59□□□□□ -2.31
PTCD3-214ENST00000483925 DSPP15924 2871 aaKnown RBP0.59□□□□□ -2.32
PTCD3-214ENST00000483925 SMIM2Q9BVW6 85 aa0.58□□□□□ -2.32
PTCD3-214ENST00000483925 ATP7AQ04656 1500 aa0.58□□□□□ -2.32
PTCD3-214ENST00000483925 MROH2BQ7Z745 1585 aa0.57□□□□□ -2.32
PTCD3-214ENST00000483925 SAMD9LQ8IVG5 1584 aa0.57□□□□□ -2.32
PTCD3-214ENST00000483925 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
PTCD3-214ENST00000483925 KAAG1Q9UBP8 84 aa0.57□□□□□ -2.32
PTCD3-214ENST00000483925 AKAP13Q12802 2813 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 HIVEP3Q5T1R4 2406 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 NAV2Q8IVL1 2488 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 NCOR2Q9Y618 2525 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 WFDC10BQ8IUB3 73 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
PTCD3-214ENST00000483925 CLTCL1P53675 1640 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 PKD1L1Q8TDX9 2849 aa0.56□□□□□ -2.32
PTCD3-214ENST00000483925 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
PTCD3-214ENST00000483925 IGLV5-48A0A075B6I7 105 aa0.55□□□□□ -2.32
PTCD3-214ENST00000483925 TFF3Q07654 80 aa0.55□□□□□ -2.32
PTCD3-214ENST00000483925 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
PTCD3-214ENST00000483925 NFAT5O94916 1531 aa0.54□□□□□ -2.32
PTCD3-214ENST00000483925 SPRR2BP35325 72 aa0.54□□□□□ -2.32
PTCD3-214ENST00000483925 DDX60Q8IY21 1712 aaKnown RBP0.54□□□□□ -2.32
PTCD3-214ENST00000483925 PCNX1Q96RV3 2341 aa0.53□□□□□ -2.33
PTCD3-214ENST00000483925 CREBBPQ92793 2442 aa0.52□□□□□ -2.33
PTCD3-214ENST00000483925 CACNA1AO00555 2505 aa0.52□□□□□ -2.33
PTCD3-214ENST00000483925 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
PTCD3-214ENST00000483925 SNRPGP62308 76 aaKnown RBP0.51□□□□□ -2.33
PTCD3-214ENST00000483925 TTTY10Q9BZA0 68 aa0.51□□□□□ -2.33
PTCD3-214ENST00000483925 TOMM7Q9P0U1 55 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms