RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 NHP2Q9NX24 153 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-216ENST00000479525 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
ECHDC1-216ENST00000479525 Q5XG85 94 aa9.3□□□□□ -0.92
ECHDC1-216ENST00000479525 HSBP1L1C9JCN9 74 aa9.28□□□□□ -0.92
ECHDC1-216ENST00000479525 F8WEM9 126 aa9.28□□□□□ -0.92
ECHDC1-216ENST00000479525 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
ECHDC1-216ENST00000479525 RPL37P61927 97 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-216ENST00000479525 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
ECHDC1-216ENST00000479525 VAMP3Q15836 100 aa9.26□□□□□ -0.93
ECHDC1-216ENST00000479525 IGFL1Q6UW32 110 aa9.26□□□□□ -0.93
ECHDC1-216ENST00000479525 TCL1BO95988 128 aa9.24□□□□□ -0.93
ECHDC1-216ENST00000479525 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
ECHDC1-216ENST00000479525 LOC100996750A0A140TA64 210 aa9.22□□□□□ -0.93
ECHDC1-216ENST00000479525 H3BUT2 72 aa9.22□□□□□ -0.93
ECHDC1-216ENST00000479525 KRTAP4-6Q9BYQ5 205 aa9.22□□□□□ -0.93
ECHDC1-216ENST00000479525 TRBV7-7A0A0K0K1E9 115 aa9.21□□□□□ -0.94
ECHDC1-216ENST00000479525 CLEC2BQ92478 149 aa9.2□□□□□ -0.94
ECHDC1-216ENST00000479525 FLGP20930 4061 aaPredicted RBP9.19□□□□□ -0.94
ECHDC1-216ENST00000479525 OCIAD2Q56VL3 154 aa9.19□□□□□ -0.94
ECHDC1-216ENST00000479525 Q6JHZ5 121 aa9.17□□□□□ -0.94
ECHDC1-216ENST00000479525 COX8AP10176 69 aa9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 COX6B2Q6YFQ2 88 aa9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 OBSCN-AS1Q96MR7 158 aa9.16□□□□□ -0.94
ECHDC1-216ENST00000479525 M0R2T5 61 aa9.15□□□□□ -0.94
ECHDC1-216ENST00000479525 LORP23490 312 aaPredicted RBP9.14□□□□□ -0.95
ECHDC1-216ENST00000479525 SNHG12Q9BXW3 62 aa9.14□□□□□ -0.95
ECHDC1-216ENST00000479525 CRCT1Q9UGL9 99 aa9.14□□□□□ -0.95
ECHDC1-216ENST00000479525 CFC1BP0CG36 223 aa9.13□□□□□ -0.95
ECHDC1-216ENST00000479525 CFC1P0CG37 223 aa9.13□□□□□ -0.95
ECHDC1-216ENST00000479525 BVES-AS1Q5T3Y7 98 aa9.13□□□□□ -0.95
ECHDC1-216ENST00000479525 FAM218AQ96MZ4 157 aa9.13□□□□□ -0.95
ECHDC1-216ENST00000479525 PAM16Q9Y3D7 125 aa9.12□□□□□ -0.95
ECHDC1-216ENST00000479525 DLEU1O43261 78 aa9.11□□□□□ -0.95
ECHDC1-216ENST00000479525 RAB37Q96AX2 223 aa9.11□□□□□ -0.95
ECHDC1-216ENST00000479525 SPATA45Q537H7 98 aa9.1□□□□□ -0.95
ECHDC1-216ENST00000479525 Q6Q795 121 aa9.1□□□□□ -0.95
ECHDC1-216ENST00000479525 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
ECHDC1-216ENST00000479525 LST1O00453 97 aa9.09□□□□□ -0.95
ECHDC1-216ENST00000479525 VAMP8Q9BV40 100 aa9.09□□□□□ -0.95
ECHDC1-216ENST00000479525 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
ECHDC1-216ENST00000479525 Q96NJ1 140 aa9.07□□□□□ -0.96
ECHDC1-216ENST00000479525 PPDPFLQ8WWR9 84 aa9.05□□□□□ -0.96
ECHDC1-216ENST00000479525 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-216ENST00000479525 A0A1B0GV72 72 aa9.04□□□□□ -0.96
ECHDC1-216ENST00000479525 ATP11AUNQ6ZP68 121 aa9.04□□□□□ -0.96
ECHDC1-216ENST00000479525 Q75L30 129 aa9.04□□□□□ -0.96
ECHDC1-216ENST00000479525 NDUFV3P56181 108 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-216ENST00000479525 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
ECHDC1-216ENST00000479525 A0A087WSZ3 146 aa9.02□□□□□ -0.97
ECHDC1-216ENST00000479525 A0A0B4J2C4 111 aa9.02□□□□□ -0.97
ECHDC1-216ENST00000479525 FABP2P12104 132 aa9□□□□□ -0.97
ECHDC1-216ENST00000479525 FXYD2P54710 66 aa9□□□□□ -0.97
ECHDC1-216ENST00000479525 DSCR10P59022 87 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 PYY3Q5JQD4 70 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 CEND1Q8N111 149 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 H0YGX0 51 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 H3BMG7 143 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 TEN1Q86WV5 123 aa8.99□□□□□ -0.97
ECHDC1-216ENST00000479525 TRIAP1O43715 76 aa8.97□□□□□ -0.97
ECHDC1-216ENST00000479525 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
ECHDC1-216ENST00000479525 A0A1W2PNM2 257 aa8.96□□□□□ -0.98
ECHDC1-216ENST00000479525 SNCGO76070 127 aa8.95□□□□□ -0.98
ECHDC1-216ENST00000479525 PRO1854Q9UHT4 67 aa8.95□□□□□ -0.98
ECHDC1-216ENST00000479525 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
ECHDC1-216ENST00000479525 K7ERJ3 54 aa8.93□□□□□ -0.98
ECHDC1-216ENST00000479525 C20orf166-AS1Q96NR2 134 aa8.93□□□□□ -0.98
ECHDC1-216ENST00000479525 A8MUU9 505 aa8.92□□□□□ -0.98
ECHDC1-216ENST00000479525 TMEM238LA0A1B0GVL6 79 aa8.9□□□□□ -0.98
ECHDC1-216ENST00000479525 A6NJY4 79 aa8.9□□□□□ -0.98
ECHDC1-216ENST00000479525 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
ECHDC1-216ENST00000479525 A0A1B0GX51 115 aa8.87□□□□□ -0.99
ECHDC1-216ENST00000479525 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
ECHDC1-216ENST00000479525 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
ECHDC1-216ENST00000479525 IGKV4-1P06312 121 aa8.86□□□□□ -0.99
ECHDC1-216ENST00000479525 PSMB2P49721 201 aa8.86□□□□□ -0.99
ECHDC1-216ENST00000479525 HSD52Q0P140 79 aa8.86□□□□□ -0.99
ECHDC1-216ENST00000479525 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
ECHDC1-216ENST00000479525 ANKRD29Q8N6D5 301 aa8.85□□□□□ -0.99
ECHDC1-216ENST00000479525 DNAL4O96015 105 aa8.84□□□□□ -0.99
ECHDC1-216ENST00000479525 ORMDL1Q9P0S3 153 aa8.84□□□□□ -0.99
ECHDC1-216ENST00000479525 LINC00313P59037 77 aa8.81□□□□□ -1
ECHDC1-216ENST00000479525 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
ECHDC1-216ENST00000479525 GHRHP01286 108 aa8.79□□□□□ -1
ECHDC1-216ENST00000479525 VPS25Q9BRG1 176 aa8.79□□□□□ -1
ECHDC1-216ENST00000479525 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
ECHDC1-216ENST00000479525 CCKP06307 115 aa8.78□□□□□ -1
ECHDC1-216ENST00000479525 IGHV6-1A0A0B4J1U7 121 aa8.77□□□□□ -1.01
ECHDC1-216ENST00000479525 TRBV7-4A0A0J9YYF1 115 aa8.77□□□□□ -1.01
ECHDC1-216ENST00000479525 FAM236DA0A1B0GTK5 79 aa8.76□□□□□ -1.01
ECHDC1-216ENST00000479525 TRACP01848 142 aa8.76□□□□□ -1.01
ECHDC1-216ENST00000479525 FAM236CP0DP71 79 aa8.76□□□□□ -1.01
ECHDC1-216ENST00000479525 LINC00472Q9H8W2 130 aa8.76□□□□□ -1.01
ECHDC1-216ENST00000479525 TMEM256-PLSCR3K7ERE1 68 aa8.73□□□□□ -1.01
ECHDC1-216ENST00000479525 COX6CP09669 75 aa8.73□□□□□ -1.01
ECHDC1-216ENST00000479525 HRES1P13985 223 aa8.72□□□□□ -1.01
ECHDC1-216ENST00000479525 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
ECHDC1-216ENST00000479525 UBE2V1Q13404 147 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms