RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
HDAC3-208ENST00000476739 SOSTDC1Q6X4U4 206 aa5.85□□□□□ -1.47
HDAC3-208ENST00000476739 M0R378 163 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 TRIAP1O43715 76 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 NPC2P61916 151 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 DIRC1Q969H9 104 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 LITAFQ99732 161 aa5.84□□□□□ -1.47
HDAC3-208ENST00000476739 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 ATP5EP2Q5VTU8 51 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 Q6JHZ5 121 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 KRTAP13-1Q8IUC0 172 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 LAMTOR3Q9UHA4 124 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 SERP1Q9Y6X1 66 aa5.83□□□□□ -1.48
HDAC3-208ENST00000476739 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
HDAC3-208ENST00000476739 PRLHP81277 87 aa5.82□□□□□ -1.48
HDAC3-208ENST00000476739 UBE2AP49459 152 aa5.81□□□□□ -1.48
HDAC3-208ENST00000476739 FAM19A1Q7Z5A9 133 aa5.81□□□□□ -1.48
HDAC3-208ENST00000476739 PRR26Q8N8Z3 221 aa5.81□□□□□ -1.48
HDAC3-208ENST00000476739 V9GYY9 64 aa5.81□□□□□ -1.48
HDAC3-208ENST00000476739 TRBV10-3A0A0K0K1G6 114 aa5.8□□□□□ -1.48
HDAC3-208ENST00000476739 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
HDAC3-208ENST00000476739 RPL28P46779 137 aaKnown RBP5.8□□□□□ -1.48
HDAC3-208ENST00000476739 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
HDAC3-208ENST00000476739 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
HDAC3-208ENST00000476739 H7C2G1 150 aa5.79□□□□□ -1.48
HDAC3-208ENST00000476739 NDUFC1O43677 76 aa5.79□□□□□ -1.48
HDAC3-208ENST00000476739 Q5XG85 94 aa5.79□□□□□ -1.48
HDAC3-208ENST00000476739 KCNQ1DNQ9H478 68 aa5.79□□□□□ -1.48
HDAC3-208ENST00000476739 PRYO14603 147 aa5.78□□□□□ -1.48
HDAC3-208ENST00000476739 SPRR1AP35321 89 aa5.78□□□□□ -1.48
HDAC3-208ENST00000476739 ANAPC11Q9NYG5 84 aa5.78□□□□□ -1.48
HDAC3-208ENST00000476739 KRTAP4-16G5E9R7 235 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-208ENST00000476739 SEC61GP60059 68 aa5.77□□□□□ -1.49
HDAC3-208ENST00000476739 HRCT1Q6UXD1 115 aa5.77□□□□□ -1.49
HDAC3-208ENST00000476739 A0A087X002 238 aa5.76□□□□□ -1.49
HDAC3-208ENST00000476739 DNAL4O96015 105 aa5.76□□□□□ -1.49
HDAC3-208ENST00000476739 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
HDAC3-208ENST00000476739 BAALC-AS2P0C853 105 aa5.76□□□□□ -1.49
HDAC3-208ENST00000476739 FAM236DA0A1B0GTK5 79 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 FAM236CP0DP71 79 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 C4orf26Q17RF5 130 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 LINC00337Q8N6G1 96 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 HIGD2AQ9BW72 106 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
HDAC3-208ENST00000476739 H0YGX0 51 aa5.74□□□□□ -1.49
HDAC3-208ENST00000476739 TRAV23DV6A0A075B6W5 121 aa5.73□□□□□ -1.49
HDAC3-208ENST00000476739 ETDCA0A1B0GVM5 59 aa5.73□□□□□ -1.49
HDAC3-208ENST00000476739 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
HDAC3-208ENST00000476739 SMCR5Q8TEV8 140 aa5.73□□□□□ -1.49
HDAC3-208ENST00000476739 TRAV13-2A0A0B4J235 113 aa5.72□□□□□ -1.49
HDAC3-208ENST00000476739 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
HDAC3-208ENST00000476739 C1orf195Q5TG92 126 aa5.72□□□□□ -1.49
HDAC3-208ENST00000476739 Q9BRP9 147 aa5.72□□□□□ -1.49
HDAC3-208ENST00000476739 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-208ENST00000476739 CLEC2BQ92478 149 aa5.71□□□□□ -1.5
HDAC3-208ENST00000476739 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
HDAC3-208ENST00000476739 TRAV7A0A075B6U4 112 aa5.7□□□□□ -1.5
HDAC3-208ENST00000476739 Q6ZRX8 168 aa5.7□□□□□ -1.5
HDAC3-208ENST00000476739 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
HDAC3-208ENST00000476739 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
HDAC3-208ENST00000476739 JMJD7-PLA2G4BH0Y9G9 81 aa5.69□□□□□ -1.5
HDAC3-208ENST00000476739 FAM229BQ4G0N7 80 aa5.69□□□□□ -1.5
HDAC3-208ENST00000476739 H3BQ85 93 aa5.68□□□□□ -1.5
HDAC3-208ENST00000476739 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
HDAC3-208ENST00000476739 KLKP1Q107X0 134 aa5.67□□□□□ -1.5
HDAC3-208ENST00000476739 GHRHP01286 108 aa5.66□□□□□ -1.5
HDAC3-208ENST00000476739 C6orf99Q4VX62 202 aa5.66□□□□□ -1.5
HDAC3-208ENST00000476739 CCKP06307 115 aa5.65□□□□□ -1.5
HDAC3-208ENST00000476739 LINC00483Q53H64 154 aa5.65□□□□□ -1.5
HDAC3-208ENST00000476739 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.5
HDAC3-208ENST00000476739 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-208ENST00000476739 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
HDAC3-208ENST00000476739 COX7BP24311 80 aa5.63□□□□□ -1.51
HDAC3-208ENST00000476739 ELOF1P60002 83 aaKnown RBP5.63□□□□□ -1.51
HDAC3-208ENST00000476739 SMIM11BQ8TCY0 68 aa5.63□□□□□ -1.51
HDAC3-208ENST00000476739 PDE6GP18545 87 aa5.62□□□□□ -1.51
HDAC3-208ENST00000476739 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
HDAC3-208ENST00000476739 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
HDAC3-208ENST00000476739 H7BZZ5 65 aa5.61□□□□□ -1.51
HDAC3-208ENST00000476739 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
HDAC3-208ENST00000476739 LINC00846Q9NV44 126 aa5.61□□□□□ -1.51
HDAC3-208ENST00000476739 ORMDL1Q9P0S3 153 aa5.61□□□□□ -1.51
HDAC3-208ENST00000476739 IGLV9-49A0A0B4J1Y8 123 aa5.6□□□□□ -1.51
HDAC3-208ENST00000476739 TMEM256-PLSCR3K7ERE1 68 aa5.6□□□□□ -1.51
HDAC3-208ENST00000476739 DHRS4-AS1Q9P1J3 65 aa5.6□□□□□ -1.51
HDAC3-208ENST00000476739 LPAP08519 4548 aa5.6□□□□□ -1.51
HDAC3-208ENST00000476739 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
HDAC3-208ENST00000476739 LRP2P98164 4655 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 TRBV7-6A0A0J9YX20 115 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 RBM3P98179 157 aaKnown RBP5.59□□□□□ -1.51
HDAC3-208ENST00000476739 PMAIP1Q13794 54 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 MOBPQ13875 183 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 Q8NBF4 154 aa5.59□□□□□ -1.51
HDAC3-208ENST00000476739 SPRR1BP22528 89 aa5.58□□□□□ -1.52
HDAC3-208ENST00000476739 CXCL6P80162 114 aa5.58□□□□□ -1.52
HDAC3-208ENST00000476739 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
HDAC3-208ENST00000476739 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms