RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TEX49A0A1B0GTD5 131 aa4.03□□□□□ -1.76
LIMD1-204ENST00000474665 H0YGX0 51 aa4.03□□□□□ -1.76
LIMD1-204ENST00000474665 MOBPQ13875 183 aa4.03□□□□□ -1.76
LIMD1-204ENST00000474665 NAA38Q9BRA0 125 aaKnown RBP4.03□□□□□ -1.76
LIMD1-204ENST00000474665 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
LIMD1-204ENST00000474665 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
LIMD1-204ENST00000474665 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
LIMD1-204ENST00000474665 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.02□□□□□ -1.77
LIMD1-204ENST00000474665 Q8NBF4 154 aa4.02□□□□□ -1.77
LIMD1-204ENST00000474665 SNHG12Q9BXW3 62 aa4.02□□□□□ -1.77
LIMD1-204ENST00000474665 SLC25A20O43772 301 aa4.01□□□□□ -1.77
LIMD1-204ENST00000474665 BATFQ16520 125 aa4.01□□□□□ -1.77
LIMD1-204ENST00000474665 LINC00304Q8N9R0 145 aa4.01□□□□□ -1.77
LIMD1-204ENST00000474665 TAX1BP3O14907 124 aa4□□□□□ -1.77
LIMD1-204ENST00000474665 PSMB2P49721 201 aa4□□□□□ -1.77
LIMD1-204ENST00000474665 SSBP3-AS1Q7Z2R9 100 aa4□□□□□ -1.77
LIMD1-204ENST00000474665 IGLV8-61A0A075B6I0 122 aa3.99□□□□□ -1.77
LIMD1-204ENST00000474665 A0A1B0GX51 115 aa3.99□□□□□ -1.77
LIMD1-204ENST00000474665 LST1O00453 97 aa3.99□□□□□ -1.77
LIMD1-204ENST00000474665 LAMTOR3Q9UHA4 124 aa3.99□□□□□ -1.77
LIMD1-204ENST00000474665 TCL1BO95988 128 aa3.98□□□□□ -1.77
LIMD1-204ENST00000474665 TRACP01848 142 aa3.98□□□□□ -1.77
LIMD1-204ENST00000474665 C9orf153Q5TBE3 101 aa3.98□□□□□ -1.77
LIMD1-204ENST00000474665 C9orf118A6NHY6 69 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 H3BUT2 72 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 COX6CP09669 75 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 SCGB1C2P0DMR2 95 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 OCIAD2Q56VL3 154 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 SPAG11AQ6PDA7 123 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 PPDPFLQ8WWR9 84 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
LIMD1-204ENST00000474665 SPINK1P00995 79 aa3.96□□□□□ -1.78
LIMD1-204ENST00000474665 NDUFV3P56181 108 aaKnown RBP3.96□□□□□ -1.78
LIMD1-204ENST00000474665 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
LIMD1-204ENST00000474665 HRCT1Q6UXD1 115 aa3.95□□□□□ -1.78
LIMD1-204ENST00000474665 A0A1W2PPM0 123 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 SNCGO76070 127 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 FABP2P12104 132 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
LIMD1-204ENST00000474665 CD164Q04900 197 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 C4orf48Q5BLP8 95 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 ORMDL1Q9P0S3 153 aa3.94□□□□□ -1.78
LIMD1-204ENST00000474665 H3BMG7 143 aa3.93□□□□□ -1.78
LIMD1-204ENST00000474665 DNAL4O96015 105 aa3.93□□□□□ -1.78
LIMD1-204ENST00000474665 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
LIMD1-204ENST00000474665 COL5A1-AS1Q5SY13 56 aa3.93□□□□□ -1.78
LIMD1-204ENST00000474665 Q6JHZ5 121 aa3.93□□□□□ -1.78
LIMD1-204ENST00000474665 F8WEM9 126 aa3.92□□□□□ -1.78
LIMD1-204ENST00000474665 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
LIMD1-204ENST00000474665 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
LIMD1-204ENST00000474665 Q5XG85 94 aa3.92□□□□□ -1.78
LIMD1-204ENST00000474665 TRBV20-1A0A075B6N2 111 aa3.91□□□□□ -1.78
LIMD1-204ENST00000474665 A0A1B0GV72 72 aa3.91□□□□□ -1.78
LIMD1-204ENST00000474665 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
LIMD1-204ENST00000474665 TMEM256-PLSCR3K7ERE1 68 aa3.91□□□□□ -1.78
LIMD1-204ENST00000474665 PRR4Q16378 134 aa3.91□□□□□ -1.78
LIMD1-204ENST00000474665 TRBV7-7A0A0K0K1E9 115 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 C9JAW5 83 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 H3BQ85 93 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 C1orf195Q5TG92 126 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 Q6Q795 121 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 ANKRD29Q8N6D5 301 aa3.9□□□□□ -1.79
LIMD1-204ENST00000474665 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 TRBV7-4A0A0J9YYF1 115 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 GHRHP01286 108 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 SMCPP49901 116 aaPredicted RBP3.89□□□□□ -1.79
LIMD1-204ENST00000474665 LYRM7Q5U5X0 104 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 OBSCN-AS1Q96MR7 158 aa3.89□□□□□ -1.79
LIMD1-204ENST00000474665 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
LIMD1-204ENST00000474665 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
LIMD1-204ENST00000474665 TEN1Q86WV5 123 aa3.88□□□□□ -1.79
LIMD1-204ENST00000474665 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
LIMD1-204ENST00000474665 SPCS1Q9Y6A9 102 aa3.88□□□□□ -1.79
LIMD1-204ENST00000474665 ASB16-AS1Q495Z4 193 aa3.87□□□□□ -1.79
LIMD1-204ENST00000474665 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
LIMD1-204ENST00000474665 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
LIMD1-204ENST00000474665 A0A087WSZ3 146 aa3.86□□□□□ -1.79
LIMD1-204ENST00000474665 K7EP34 96 aa3.86□□□□□ -1.79
LIMD1-204ENST00000474665 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
LIMD1-204ENST00000474665 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
LIMD1-204ENST00000474665 Q96NJ1 140 aa3.86□□□□□ -1.79
LIMD1-204ENST00000474665 H3BT86 120 aa3.85□□□□□ -1.79
LIMD1-204ENST00000474665 CCKP06307 115 aa3.85□□□□□ -1.79
LIMD1-204ENST00000474665 Q6ZQT0 140 aa3.85□□□□□ -1.79
LIMD1-204ENST00000474665 LOC110117498A0A087WWA1 95 aa3.84□□□□□ -1.79
LIMD1-204ENST00000474665 C14orf132Q9NPU4 83 aa3.84□□□□□ -1.79
LIMD1-204ENST00000474665 JMJD7-PLA2G4BH0Y9G9 81 aa3.83□□□□□ -1.8
LIMD1-204ENST00000474665 DSCR8Q96T75 97 aa3.82□□□□□ -1.8
LIMD1-204ENST00000474665 LINC00472Q9H8W2 130 aa3.82□□□□□ -1.8
LIMD1-204ENST00000474665 XP32Q5T750 250 aa3.81□□□□□ -1.8
LIMD1-204ENST00000474665 GTF2H5Q6ZYL4 71 aa3.81□□□□□ -1.8
LIMD1-204ENST00000474665 VPS25Q9BRG1 176 aa3.81□□□□□ -1.8
LIMD1-204ENST00000474665 C9orf92A6NGG3 77 aa3.8□□□□□ -1.8
LIMD1-204ENST00000474665 CDIP1Q9H305 208 aa3.8□□□□□ -1.8
LIMD1-204ENST00000474665 SS18L2Q9UHA2 77 aa3.8□□□□□ -1.8
LIMD1-204ENST00000474665 PDE6GP18545 87 aa3.79□□□□□ -1.8
LIMD1-204ENST00000474665 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
LIMD1-204ENST00000474665 A0A1B0GV90 55 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms