RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CAMK2N2Q96S95 79 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 PRO0255Q9UI72 69 aa3.13□□□□□ -1.91
TMEM39A-206ENST00000473684 KRTAP4-16G5E9R7 235 aaPredicted RBP3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 SPRR1AP35321 89 aa3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 IGFL1Q6UW32 110 aa3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 C10orf99Q6UWK7 81 aa3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 PRR34Q9NV39 138 aa3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 CELSR3Q9NYQ7 3312 aa3.12□□□□□ -1.91
TMEM39A-206ENST00000473684 RPL37AP8A6NKH3 93 aa3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 P0C880 135 aa3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 SPENQ96T58 3664 aaKnown RBP3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 EP300Q09472 2414 aaPredicted RBP3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 LINC00472Q9H8W2 130 aa3.11□□□□□ -1.91
TMEM39A-206ENST00000473684 DEFB136Q30KP8 78 aa3.1□□□□□ -1.91
TMEM39A-206ENST00000473684 CSMD1Q96PZ7 3565 aa3.1□□□□□ -1.91
TMEM39A-206ENST00000473684 KRTAP16-1A8MUX0 517 aa3.1□□□□□ -1.91
TMEM39A-206ENST00000473684 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
TMEM39A-206ENST00000473684 NCOR2Q9Y618 2525 aa3.09□□□□□ -1.91
TMEM39A-206ENST00000473684 CREBBPQ92793 2442 aa3.09□□□□□ -1.91
TMEM39A-206ENST00000473684 C4orf3Q8WVX3 66 aa3.09□□□□□ -1.91
TMEM39A-206ENST00000473684 ANKHD1Q8IWZ3 2542 aaKnown RBP3.09□□□□□ -1.92
TMEM39A-206ENST00000473684 ANKRD17O75179 2603 aaKnown RBP3.09□□□□□ -1.92
TMEM39A-206ENST00000473684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.09□□□□□ -1.921e-8■■■■□ 20
TMEM39A-206ENST00000473684 MSMBP08118 114 aa3.09□□□□□ -1.92
TMEM39A-206ENST00000473684 DEFB130BP0DP73 79 aa3.09□□□□□ -1.92
TMEM39A-206ENST00000473684 DEFB130AP0DP74 79 aa3.09□□□□□ -1.92
TMEM39A-206ENST00000473684 SMG1Q96Q15 3661 aaKnown RBP3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 FBN2P35556 2912 aa3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 HELZ2Q9BYK8 2649 aaKnown RBP3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 LELP1Q5T871 98 aa3.08□□□□□ -1.92
TMEM39A-206ENST00000473684 A0A096LPF7 62 aa3.07□□□□□ -1.92
TMEM39A-206ENST00000473684 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
TMEM39A-206ENST00000473684 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
TMEM39A-206ENST00000473684 DNAH6Q9C0G6 4158 aa3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 A8MUU9 505 aa3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 DOPEY1Q5JWR5 2465 aa3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 SPTA1P02549 2419 aa3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 FBN3Q75N90 2809 aa3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 RIF1Q5UIP0 2472 aaKnown RBP3.06□□□□□ -1.92
TMEM39A-206ENST00000473684 OTOGQ6ZRI0 2925 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 IGLV7-43P04211 117 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 TLX1NBP0CAT3 122 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 ACACAQ13085 2346 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 C8orf17Q9NRJ1 99 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
TMEM39A-206ENST00000473684 A0A0G2JQZ4 141 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 A0A1W2PNN7 141 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 C15orf56Q8N910 161 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 C20orf166-AS1Q96NR2 134 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 CMYA5Q8N3K9 4069 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 KRTAP26-1Q6PEX3 210 aa3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 ANKRD11Q6UB99 2663 aaPredicted RBP3.04□□□□□ -1.92
TMEM39A-206ENST00000473684 KRTAP10-9P60411 292 aa3.03□□□□□ -1.92
TMEM39A-206ENST00000473684 MRPL34Q9BQ48 92 aaKnown RBP3.03□□□□□ -1.92
TMEM39A-206ENST00000473684 ALMS1Q8TCU4 4167 aa3.03□□□□□ -1.92
TMEM39A-206ENST00000473684 NUPR2A6NF83 97 aa3.03□□□□□ -1.92
TMEM39A-206ENST00000473684 DNAH10OSP0CZ25 163 aa3.03□□□□□ -1.92
TMEM39A-206ENST00000473684 BOD1L1Q8NFC6 3051 aa3.03□□□□□ -1.93
TMEM39A-206ENST00000473684 LOC400499M0QZD8 3231 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 ABCA2Q9BZC7 2435 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 SPTAN1Q13813 2472 aaKnown RBP3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 PTPN13Q12923 2485 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 SPRR1BP22528 89 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 UNC79Q9P2D8 2635 aa3.02□□□□□ -1.93
TMEM39A-206ENST00000473684 A0A1W2PPR1 153 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 LINC00304Q8N9R0 145 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 KRTAP1-5Q9BYS1 174 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 CCL19Q99731 98 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 DCHS2Q6V1P9 2916 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 A0A1B0GVX0 72 aa3.01□□□□□ -1.93
TMEM39A-206ENST00000473684 ADGRG4Q8IZF6 3080 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 DNAH1Q9P2D7 4330 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 IGF2RP11717 2491 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 SPG11Q96JI7 2443 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 Q5W150 140 aa3□□□□□ -1.93
TMEM39A-206ENST00000473684 COL12A1Q99715 3063 aa2.99□□□□□ -1.93
TMEM39A-206ENST00000473684 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
TMEM39A-206ENST00000473684 APCP25054 2843 aa2.99□□□□□ -1.93
TMEM39A-206ENST00000473684 K7ERS5 55 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 Q96NJ1 140 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 CHD8Q9HCK8 2581 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 LY6G6CO95867 125 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 KRTAP7-1Q8IUC3 87 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 MT3P25713 68 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 SPINT4Q6UDR6 99 aa2.98□□□□□ -1.93
TMEM39A-206ENST00000473684 LRBAP50851 2863 aa2.97□□□□□ -1.93
TMEM39A-206ENST00000473684 A0A087WTM6 91 aa2.97□□□□□ -1.93
TMEM39A-206ENST00000473684 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
TMEM39A-206ENST00000473684 CHTF8P0CG12 524 aa2.97□□□□□ -1.93
TMEM39A-206ENST00000473684 HIVEP3Q5T1R4 2406 aa2.96□□□□□ -1.94
TMEM39A-206ENST00000473684 HRNRQ86YZ3 2850 aaPredicted RBP2.96□□□□□ -1.94
TMEM39A-206ENST00000473684 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 1231.6 ms