RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
SCAMP4-207ENST00000472442 A0A1B0GW54 56 aa8.44□□□□□ -1.06
SCAMP4-207ENST00000472442 DHRS4-AS1Q9P1J3 65 aa8.44□□□□□ -1.06
SCAMP4-207ENST00000472442 Q1T7F1 81 aa8.44□□□□□ -1.06
SCAMP4-207ENST00000472442 STARD9Q9P2P6 4700 aa8.44□□□□□ -1.06
SCAMP4-207ENST00000472442 PSPHP1O15172 72 aa8.43□□□□□ -1.06
SCAMP4-207ENST00000472442 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
SCAMP4-207ENST00000472442 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
SCAMP4-207ENST00000472442 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
SCAMP4-207ENST00000472442 PRR15Q8IV56 129 aa8.41□□□□□ -1.06
SCAMP4-207ENST00000472442 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
SCAMP4-207ENST00000472442 SEC61GP60059 68 aa8.41□□□□□ -1.06
SCAMP4-207ENST00000472442 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
SCAMP4-207ENST00000472442 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
SCAMP4-207ENST00000472442 TRAV22A0A0B4J277 110 aa8.39□□□□□ -1.07
SCAMP4-207ENST00000472442 HCG22E2RYF7 251 aa8.39□□□□□ -1.07
SCAMP4-207ENST00000472442 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
SCAMP4-207ENST00000472442 A0A0G2JQZ4 141 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 KRTAP7-1Q8IUC3 87 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 PSCAO43653 123 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 SPRR1AP35321 89 aa8.37□□□□□ -1.07
SCAMP4-207ENST00000472442 NUPR2A6NF83 97 aa8.36□□□□□ -1.07
SCAMP4-207ENST00000472442 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
SCAMP4-207ENST00000472442 UBE2BP63146 152 aa8.35□□□□□ -1.07
SCAMP4-207ENST00000472442 PLA2G2DQ9UNK4 145 aa8.35□□□□□ -1.07
SCAMP4-207ENST00000472442 WFDC13Q8IUB5 93 aa8.35□□□□□ -1.07
SCAMP4-207ENST00000472442 LINC00476Q8WZB0 136 aa8.34□□□□□ -1.07
SCAMP4-207ENST00000472442 PMAIP1Q13794 54 aa8.34□□□□□ -1.08
SCAMP4-207ENST00000472442 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
SCAMP4-207ENST00000472442 A8MUN3 132 aa8.33□□□□□ -1.08
SCAMP4-207ENST00000472442 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
SCAMP4-207ENST00000472442 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
SCAMP4-207ENST00000472442 NDUFB1O75438 58 aa8.31□□□□□ -1.08
SCAMP4-207ENST00000472442 MP68P56378 58 aa8.31□□□□□ -1.08
SCAMP4-207ENST00000472442 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
SCAMP4-207ENST00000472442 MRPL55Q7Z7F7 128 aaKnown RBP8.3□□□□□ -1.08
SCAMP4-207ENST00000472442 LINC00208Q96KT6 92 aa8.3□□□□□ -1.08
SCAMP4-207ENST00000472442 IGFL1Q6UW32 110 aa8.3□□□□□ -1.08
SCAMP4-207ENST00000472442 A8MU10 97 aa8.29□□□□□ -1.08
SCAMP4-207ENST00000472442 A0A087WSZ3 146 aa8.28□□□□□ -1.08
SCAMP4-207ENST00000472442 A0A096LNI7 61 aa8.28□□□□□ -1.08
SCAMP4-207ENST00000472442 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
SCAMP4-207ENST00000472442 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
SCAMP4-207ENST00000472442 KMT2AQ03164 3969 aa8.27□□□□□ -1.08
SCAMP4-207ENST00000472442 Q5VV11 94 aa8.26□□□□□ -1.09
SCAMP4-207ENST00000472442 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
SCAMP4-207ENST00000472442 C16orf90A8MZG2 172 aa8.26□□□□□ -1.09
SCAMP4-207ENST00000472442 IGKV2-24A0A0C4DH68 120 aa8.25□□□□□ -1.09
SCAMP4-207ENST00000472442 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
SCAMP4-207ENST00000472442 FBN3Q75N90 2809 aa8.24□□□□□ -1.09
SCAMP4-207ENST00000472442 H0Y9P7 68 aa8.24□□□□□ -1.09
SCAMP4-207ENST00000472442 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
SCAMP4-207ENST00000472442 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
SCAMP4-207ENST00000472442 PRLHP81277 87 aa8.23□□□□□ -1.09
SCAMP4-207ENST00000472442 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
SCAMP4-207ENST00000472442 CASC2Q6XLA1 102 aa8.21□□□□□ -1.1
SCAMP4-207ENST00000472442 Q8N9P0 234 aaPredicted RBP8.21□□□□□ -1.1
SCAMP4-207ENST00000472442 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
SCAMP4-207ENST00000472442 CHKB-CPT1BH3BT56 60 aa8.2□□□□□ -1.1
SCAMP4-207ENST00000472442 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
SCAMP4-207ENST00000472442 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
SCAMP4-207ENST00000472442 UBE2AP49459 152 aa8.18□□□□□ -1.1
SCAMP4-207ENST00000472442 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
SCAMP4-207ENST00000472442 Q6ZR54 194 aa8.17□□□□□ -1.1
SCAMP4-207ENST00000472442 KRTAP11-1Q8IUC1 163 aa8.17□□□□□ -1.1
SCAMP4-207ENST00000472442 LIMD2Q9BT23 127 aa8.17□□□□□ -1.1
SCAMP4-207ENST00000472442 PANO1I0J062 215 aa8.16□□□□□ -1.1
SCAMP4-207ENST00000472442 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
SCAMP4-207ENST00000472442 H3BPC8 53 aa8.16□□□□□ -1.1
SCAMP4-207ENST00000472442 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
SCAMP4-207ENST00000472442 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
SCAMP4-207ENST00000472442 TGP01266 2768 aa8.15□□□□□ -1.11
SCAMP4-207ENST00000472442 A0A087WTM6 91 aa8.14□□□□□ -1.11
SCAMP4-207ENST00000472442 A8MWP4 228 aa8.13□□□□□ -1.11
SCAMP4-207ENST00000472442 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
SCAMP4-207ENST00000472442 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
SCAMP4-207ENST00000472442 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
SCAMP4-207ENST00000472442 COA5Q86WW8 74 aa8.12□□□□□ -1.11
SCAMP4-207ENST00000472442 LINC00472Q9H8W2 130 aa8.11□□□□□ -1.11
SCAMP4-207ENST00000472442 CD164Q04900 197 aa8.1□□□□□ -1.11
SCAMP4-207ENST00000472442 LCA10Q71F78 164 aa8.1□□□□□ -1.11
SCAMP4-207ENST00000472442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
SCAMP4-207ENST00000472442 A6NED7 52 aa8.09□□□□□ -1.11
SCAMP4-207ENST00000472442 H0Y9J4 135 aa8.09□□□□□ -1.11
SCAMP4-207ENST00000472442 Q75L30 129 aa8.08□□□□□ -1.12
SCAMP4-207ENST00000472442 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
SCAMP4-207ENST00000472442 LY6G6CO95867 125 aa8.07□□□□□ -1.12
SCAMP4-207ENST00000472442 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
SCAMP4-207ENST00000472442 PCOTHQ58A44 107 aa8.07□□□□□ -1.12
SCAMP4-207ENST00000472442 KTN1-AS1Q86SY8 53 aa8.07□□□□□ -1.12
SCAMP4-207ENST00000472442 IGLV7-46A0A075B6I9 117 aa8.06□□□□□ -1.12
SCAMP4-207ENST00000472442 LOC101927531A0A1B0GV80 90 aa8.06□□□□□ -1.12
SCAMP4-207ENST00000472442 RTL8CO15255 209 aa8.06□□□□□ -1.12
SCAMP4-207ENST00000472442 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
SCAMP4-207ENST00000472442 HYDINQ4G0P3 5121 aa8.05□□□□□ -1.12
SCAMP4-207ENST00000472442 DNAH8Q96JB1 4490 aa8.04□□□□□ -1.12
SCAMP4-207ENST00000472442 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
SCAMP4-207ENST00000472442 ATP11AUNQ6ZP68 121 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms