RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PRR34Q9NV39 138 aa4.35□□□□□ -1.71
BRCA1-210ENST00000471181 M0QZ58 72 aa4.35□□□□□ -1.71
BRCA1-210ENST00000471181 CFAP47Q6ZTR5 3102 aa4.35□□□□□ -1.71
BRCA1-210ENST00000471181 C2CD3Q4AC94 2353 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 TLN2Q9Y4G6 2542 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 PTPRBP23467 1997 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 FAM229BQ4G0N7 80 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 MTORP42345 2549 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 C19orf73Q9NVV2 129 aa4.34□□□□□ -1.71
BRCA1-210ENST00000471181 FN1P02751 2386 aaKnown RBP4.34□□□□□ -1.72
BRCA1-210ENST00000471181 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-210ENST00000471181 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
BRCA1-210ENST00000471181 USP9XQ93008 2570 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-210ENST00000471181 CNBPP62633 177 aaKnown RBP4.32□□□□□ -1.72
BRCA1-210ENST00000471181 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
BRCA1-210ENST00000471181 Q5VSD8 79 aa4.32□□□□□ -1.72
BRCA1-210ENST00000471181 CEP295Q9C0D2 2601 aa4.32□□□□□ -1.72
BRCA1-210ENST00000471181 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
BRCA1-210ENST00000471181 WDR87Q6ZQQ6 2873 aa4.31□□□□□ -1.72
BRCA1-210ENST00000471181 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
BRCA1-210ENST00000471181 POLQO75417 2590 aa4.31□□□□□ -1.72
BRCA1-210ENST00000471181 TNP2Q05952 138 aa4.31□□□□□ -1.72
BRCA1-210ENST00000471181 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
BRCA1-210ENST00000471181 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
BRCA1-210ENST00000471181 SPTBN4Q9H254 2564 aa4.3□□□□□ -1.72
BRCA1-210ENST00000471181 FLNBO75369 2602 aaKnown RBP4.3□□□□□ -1.72
BRCA1-210ENST00000471181 ANKRD11Q6UB99 2663 aaPredicted RBP4.29□□□□□ -1.72
BRCA1-210ENST00000471181 USP9YO00507 2555 aaPredicted RBP4.28□□□□□ -1.72
BRCA1-210ENST00000471181 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
BRCA1-210ENST00000471181 Q5W150 140 aa4.28□□□□□ -1.72
BRCA1-210ENST00000471181 EPG5Q9HCE0 2579 aa4.28□□□□□ -1.72
BRCA1-210ENST00000471181 KRTAP10-3P60369 221 aa4.28□□□□□ -1.72
BRCA1-210ENST00000471181 Q5VV11 94 aa4.27□□□□□ -1.73
BRCA1-210ENST00000471181 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
BRCA1-210ENST00000471181 CELSR3Q9NYQ7 3312 aa4.27□□□□□ -1.73
BRCA1-210ENST00000471181 SETD2Q9BYW2 2564 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-210ENST00000471181 ZFHX3Q15911 3703 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 KLK9Q2XQG4 91 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 AKAP9Q99996 3911 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 VPS13CQ709C8 3753 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
BRCA1-210ENST00000471181 NBPF19A0A087WUL8 3843 aa4.26□□□□□ -1.73
BRCA1-210ENST00000471181 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
BRCA1-210ENST00000471181 A0A0C4DFX4 3053 aa4.25□□□□□ -1.73
BRCA1-210ENST00000471181 F8P00451 2351 aa4.24□□□□□ -1.73
BRCA1-210ENST00000471181 Q5XG85 94 aa4.24□□□□□ -1.73
BRCA1-210ENST00000471181 PKD1L2Q7Z442 2459 aa4.23□□□□□ -1.73
BRCA1-210ENST00000471181 LOC400499M0QZD8 3231 aa4.22□□□□□ -1.73
BRCA1-210ENST00000471181 Q8NDZ9 215 aa4.2□□□□□ -1.74
BRCA1-210ENST00000471181 RELNP78509 3460 aa4.18□□□□□ -1.74
BRCA1-210ENST00000471181 ACANP16112 2415 aa4.16□□□□□ -1.74
BRCA1-210ENST00000471181 PLAC8Q9NZF1 115 aa4.16□□□□□ -1.74
BRCA1-210ENST00000471181 NBEAQ8NFP9 2946 aa4.15□□□□□ -1.75
BRCA1-210ENST00000471181 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
BRCA1-210ENST00000471181 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
BRCA1-210ENST00000471181 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
BRCA1-210ENST00000471181 ZNF292O60281 2723 aa4.14□□□□□ -1.75
BRCA1-210ENST00000471181 ATMQ13315 3056 aa4.13□□□□□ -1.75
BRCA1-210ENST00000471181 KALRNO60229 2985 aa4.13□□□□□ -1.75
BRCA1-210ENST00000471181 AKAP13Q12802 2813 aa4.12□□□□□ -1.75
BRCA1-210ENST00000471181 ITPR1Q14643 2758 aa4.12□□□□□ -1.75
BRCA1-210ENST00000471181 CMYA5Q8N3K9 4069 aa4.12□□□□□ -1.75
BRCA1-210ENST00000471181 HECTD1Q9ULT8 2610 aa4.12□□□□□ -1.75
BRCA1-210ENST00000471181 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
BRCA1-210ENST00000471181 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
BRCA1-210ENST00000471181 A0A096LNT2 108 aa4.11□□□□□ -1.75
BRCA1-210ENST00000471181 Q6ZR54 194 aa4.11□□□□□ -1.75
BRCA1-210ENST00000471181 LINC00472Q9H8W2 130 aa4.11□□□□□ -1.75
BRCA1-210ENST00000471181 CR1P17927 2039 aa4.1□□□□□ -1.75
BRCA1-210ENST00000471181 ZNF469Q96JG9 3925 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-210ENST00000471181 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
BRCA1-210ENST00000471181 A8MU10 97 aa4.1□□□□□ -1.75
BRCA1-210ENST00000471181 MAST4O15021 2626 aa4.09□□□□□ -1.76
BRCA1-210ENST00000471181 PANO1I0J062 215 aa4.09□□□□□ -1.76
BRCA1-210ENST00000471181 ZZEF1O43149 2961 aa4.09□□□□□ -1.76
BRCA1-210ENST00000471181 A8MUU9 505 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 OXTP01178 125 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 SPRR1BP22528 89 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 DMXL2Q8TDJ6 3036 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 CUBNO60494 3623 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
BRCA1-210ENST00000471181 KMT2BQ9UMN6 2715 aaPredicted RBP4.06□□□□□ -1.76
BRCA1-210ENST00000471181 ATRQ13535 2644 aa4.05□□□□□ -1.76
BRCA1-210ENST00000471181 USP24Q9UPU5 2620 aa4.05□□□□□ -1.76
BRCA1-210ENST00000471181 KRTAP10-1P60331 282 aa4.05□□□□□ -1.76
BRCA1-210ENST00000471181 CSMD1Q96PZ7 3565 aa4.04□□□□□ -1.76
BRCA1-210ENST00000471181 ANKRD17O75179 2603 aaKnown RBP4.03□□□□□ -1.76
BRCA1-210ENST00000471181 SPRR1AP35321 89 aa4.03□□□□□ -1.76
BRCA1-210ENST00000471181 TNP1P09430 55 aa4.03□□□□□ -1.76
BRCA1-210ENST00000471181 DNAH3Q8TD57 4116 aa4.02□□□□□ -1.77
BRCA1-210ENST00000471181 CSMD2Q7Z408 3487 aa4.02□□□□□ -1.77
BRCA1-210ENST00000471181 ANK3Q12955 4377 aaKnown RBP4.02□□□□□ -1.77
BRCA1-210ENST00000471181 KRTAP10-2P60368 255 aa4.01□□□□□ -1.77
BRCA1-210ENST00000471181 BOD1L1Q8NFC6 3051 aa4□□□□□ -1.77
BRCA1-210ENST00000471181 DCHS2Q6V1P9 2916 aa4□□□□□ -1.77
BRCA1-210ENST00000471181 SETXQ7Z333 2677 aaKnown RBP3.99□□□□□ -1.77
BRCA1-210ENST00000471181 P0C880 135 aa3.98□□□□□ -1.77
BRCA1-210ENST00000471181 LCE6AA0A183 80 aa3.98□□□□□ -1.77
BRCA1-210ENST00000471181 ANK2Q01484 3957 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms