RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 FAT3Q8TDW7 4589 aa12.32□□□□□ -0.44
BRAF-202ENST00000469930 TMEM256-PLSCR3K7ERE1 68 aa12.32□□□□□ -0.44
BRAF-202ENST00000469930 ANAPC11Q9NYG5 84 aa12.32□□□□□ -0.44
BRAF-202ENST00000469930 LAMTOR3Q9UHA4 124 aa12.32□□□□□ -0.44
BRAF-202ENST00000469930 A0A087X002 238 aa12.3□□□□□ -0.44
BRAF-202ENST00000469930 KRTAP29-1A8MX34 341 aaPredicted RBP12.29□□□□□ -0.44
BRAF-202ENST00000469930 K7EP34 96 aa12.29□□□□□ -0.44
BRAF-202ENST00000469930 KRTAP10-8P60410 259 aa12.28□□□□□ -0.44
BRAF-202ENST00000469930 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
BRAF-202ENST00000469930 KRTAP13-2Q52LG2 175 aa12.28□□□□□ -0.44
BRAF-202ENST00000469930 H3BMG7 143 aa12.27□□□□□ -0.45
BRAF-202ENST00000469930 BAALC-AS2P0C853 105 aa12.27□□□□□ -0.45
BRAF-202ENST00000469930 GTF2H5Q6ZYL4 71 aa12.26□□□□□ -0.45
BRAF-202ENST00000469930 SSBP3-AS1Q7Z2R9 100 aa12.26□□□□□ -0.45
BRAF-202ENST00000469930 PRR26Q8N8Z3 221 aa12.26□□□□□ -0.45
BRAF-202ENST00000469930 LRP1Q07954 4544 aaKnown RBP12.26□□□□□ -0.45
BRAF-202ENST00000469930 IGLV8-61A0A075B6I0 122 aa12.25□□□□□ -0.45
BRAF-202ENST00000469930 C9JAW5 83 aa12.24□□□□□ -0.45
BRAF-202ENST00000469930 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
BRAF-202ENST00000469930 H3BT86 120 aa12.23□□□□□ -0.45
BRAF-202ENST00000469930 C3orf22Q8N5N4 141 aa12.23□□□□□ -0.45
BRAF-202ENST00000469930 Q8NBF4 154 aa12.22□□□□□ -0.45
BRAF-202ENST00000469930 MYCBP2O75592 4640 aa12.22□□□□□ -0.45
BRAF-202ENST00000469930 F8WEM9 126 aa12.21□□□□□ -0.45
BRAF-202ENST00000469930 MT1HL1P0DM35 61 aa12.21□□□□□ -0.45
BRAF-202ENST00000469930 TYMSOSQ8TAI1 123 aa12.21□□□□□ -0.45
BRAF-202ENST00000469930 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
BRAF-202ENST00000469930 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
BRAF-202ENST00000469930 MOBPQ13875 183 aa12.18□□□□□ -0.46
BRAF-202ENST00000469930 TNXBP22105 4242 aa12.17□□□□□ -0.46
BRAF-202ENST00000469930 Q6JHZ5 121 aa12.17□□□□□ -0.46
BRAF-202ENST00000469930 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
BRAF-202ENST00000469930 PRO0461Q9UI25 63 aa12.17□□□□□ -0.46
BRAF-202ENST00000469930 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
BRAF-202ENST00000469930 JMJD7-PLA2G4BH0Y9G9 81 aa12.13□□□□□ -0.47
BRAF-202ENST00000469930 A0A1B0GV90 55 aa12.12□□□□□ -0.47
BRAF-202ENST00000469930 F8W1H4 67 aa12.12□□□□□ -0.47
BRAF-202ENST00000469930 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
BRAF-202ENST00000469930 SPAG11AQ6PDA7 123 aa12.12□□□□□ -0.47
BRAF-202ENST00000469930 CD164Q04900 197 aa12.11□□□□□ -0.47
BRAF-202ENST00000469930 OBSCN-AS1Q96MR7 158 aa12.11□□□□□ -0.47
BRAF-202ENST00000469930 RBM3P98179 157 aaKnown RBP12.09□□□□□ -0.47
BRAF-202ENST00000469930 IGFL1Q6UW32 110 aa12.09□□□□□ -0.47
BRAF-202ENST00000469930 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
BRAF-202ENST00000469930 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
BRAF-202ENST00000469930 TRBV7-4A0A0J9YYF1 115 aa12.07□□□□□ -0.48
BRAF-202ENST00000469930 RPS29P62273 56 aaKnown RBP12.06□□□□□ -0.48
BRAF-202ENST00000469930 J3QL48 77 aa12.05□□□□□ -0.48
BRAF-202ENST00000469930 SPINK1P00995 79 aa12.05□□□□□ -0.48
BRAF-202ENST00000469930 Q6Q795 121 aa12.05□□□□□ -0.48
BRAF-202ENST00000469930 C4orf48Q5BLP8 95 aa12.04□□□□□ -0.48
BRAF-202ENST00000469930 PDE6GP18545 87 aa12.03□□□□□ -0.48
BRAF-202ENST00000469930 C21orf62-AS1Q17RA5 79 aa12.03□□□□□ -0.48
BRAF-202ENST00000469930 DSCR8Q96T75 97 aa12.03□□□□□ -0.48
BRAF-202ENST00000469930 LOC110117498A0A087WWA1 95 aa12.02□□□□□ -0.49
BRAF-202ENST00000469930 TEN1Q86WV5 123 aa12.01□□□□□ -0.49
BRAF-202ENST00000469930 HERC1Q15751 4861 aa11.99□□□□□ -0.49
BRAF-202ENST00000469930 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
BRAF-202ENST00000469930 Q5XG85 94 aa11.98□□□□□ -0.49
BRAF-202ENST00000469930 A0A1B0GW54 56 aa11.96□□□□□ -0.49
BRAF-202ENST00000469930 A0A1W2PNM2 257 aa11.96□□□□□ -0.49
BRAF-202ENST00000469930 Q6ZQT0 140 aa11.96□□□□□ -0.49
BRAF-202ENST00000469930 TRBV7-7A0A0K0K1E9 115 aa11.95□□□□□ -0.5
BRAF-202ENST00000469930 A0A1B0GV72 72 aa11.95□□□□□ -0.5
BRAF-202ENST00000469930 C14orf132Q9NPU4 83 aa11.94□□□□□ -0.5
BRAF-202ENST00000469930 CCKP06307 115 aa11.93□□□□□ -0.5
BRAF-202ENST00000469930 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
BRAF-202ENST00000469930 ETDBQ3ZM63 59 aa11.91□□□□□ -0.5
BRAF-202ENST00000469930 HRCT1Q6UXD1 115 aa11.91□□□□□ -0.5
BRAF-202ENST00000469930 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.5
BRAF-202ENST00000469930 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
BRAF-202ENST00000469930 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
BRAF-202ENST00000469930 A0A087WSZ3 146 aa11.83□□□□□ -0.52
BRAF-202ENST00000469930 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
BRAF-202ENST00000469930 C1orf195Q5TG92 126 aa11.75□□□□□ -0.53
BRAF-202ENST00000469930 FP248Q71RG6 208 aaPredicted RBP11.75□□□□□ -0.53
BRAF-202ENST00000469930 Q96NJ1 140 aa11.71□□□□□ -0.53
BRAF-202ENST00000469930 LINC00472Q9H8W2 130 aa11.71□□□□□ -0.53
BRAF-202ENST00000469930 FAM240AA0A1B0GVK7 77 aa11.68□□□□□ -0.54
BRAF-202ENST00000469930 ACYP1P07311 99 aa11.68□□□□□ -0.54
BRAF-202ENST00000469930 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
BRAF-202ENST00000469930 NREPQ16612 68 aa11.65□□□□□ -0.54
BRAF-202ENST00000469930 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
BRAF-202ENST00000469930 J3KT08 172 aa11.63□□□□□ -0.55
BRAF-202ENST00000469930 IGLV7-46A0A075B6I9 117 aa11.62□□□□□ -0.55
BRAF-202ENST00000469930 J3QR89 54 aa11.61□□□□□ -0.55
BRAF-202ENST00000469930 PRR4Q16378 134 aa11.61□□□□□ -0.55
BRAF-202ENST00000469930 Q6ZVQ6 151 aa11.6□□□□□ -0.55
BRAF-202ENST00000469930 UBL5Q9BZL1 73 aa11.6□□□□□ -0.55
BRAF-202ENST00000469930 IGKV4-1P06312 121 aa11.57□□□□□ -0.56
BRAF-202ENST00000469930 TPRXLQ17RH7 258 aa11.56□□□□□ -0.56
BRAF-202ENST00000469930 DEFB116Q30KQ4 102 aa11.53□□□□□ -0.56
BRAF-202ENST00000469930 SIGMAR1Q99720 223 aa11.53□□□□□ -0.56
BRAF-202ENST00000469930 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
BRAF-202ENST00000469930 HMCN2Q8NDA2 5059 aa11.51□□□□□ -0.57
BRAF-202ENST00000469930 A8MWP4 228 aa11.49□□□□□ -0.57
BRAF-202ENST00000469930 BPY2O14599 106 aa11.49□□□□□ -0.57
BRAF-202ENST00000469930 K7ERU9 68 aa11.48□□□□□ -0.57
BRAF-202ENST00000469930 DSCR10P59022 87 aa11.48□□□□□ -0.57
BRAF-202ENST00000469930 NDUFB1O75438 58 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms