RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 Q6ZQY7 126 aa11.06□□□□□ -0.64
USP11-205ENST00000467378 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
USP11-205ENST00000467378 FAM218AQ96MZ4 157 aa11.06□□□□□ -0.64
USP11-205ENST00000467378 Q8NBF4 154 aa11.05□□□□□ -0.64
USP11-205ENST00000467378 LAMTOR3Q9UHA4 124 aa11.05□□□□□ -0.64
USP11-205ENST00000467378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.04□□□□□ -0.64
USP11-205ENST00000467378 PSMB2P49721 201 aa11.02□□□□□ -0.65
USP11-205ENST00000467378 C9orf153Q5TBE3 101 aa11.02□□□□□ -0.65
USP11-205ENST00000467378 SPAG11AQ6PDA7 123 aa11.01□□□□□ -0.65
USP11-205ENST00000467378 A0A1B0GX51 115 aa11□□□□□ -0.65
USP11-205ENST00000467378 SNCGO76070 127 aa10.99□□□□□ -0.65
USP11-205ENST00000467378 COX6CP09669 75 aa10.99□□□□□ -0.65
USP11-205ENST00000467378 CLEC2BQ92478 149 aa10.99□□□□□ -0.65
USP11-205ENST00000467378 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
USP11-205ENST00000467378 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.65
USP11-205ENST00000467378 OCIAD2Q56VL3 154 aa10.95□□□□□ -0.66
USP11-205ENST00000467378 SPINK1P00995 79 aa10.94□□□□□ -0.66
USP11-205ENST00000467378 BATFQ16520 125 aa10.93□□□□□ -0.66
USP11-205ENST00000467378 SCGB1C2P0DMR2 95 aa10.91□□□□□ -0.66
USP11-205ENST00000467378 RPS29P62273 56 aaKnown RBP10.9□□□□□ -0.66
USP11-205ENST00000467378 SNHG12Q9BXW3 62 aa10.9□□□□□ -0.66
USP11-205ENST00000467378 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
USP11-205ENST00000467378 IGLV8-61A0A075B6I0 122 aa10.88□□□□□ -0.67
USP11-205ENST00000467378 F8WEM9 126 aa10.88□□□□□ -0.67
USP11-205ENST00000467378 LST1O00453 97 aa10.88□□□□□ -0.67
USP11-205ENST00000467378 A0A0G2JQZ4 141 aa10.87□□□□□ -0.67
USP11-205ENST00000467378 DNAL4O96015 105 aa10.87□□□□□ -0.67
USP11-205ENST00000467378 GHRHP01286 108 aa10.87□□□□□ -0.67
USP11-205ENST00000467378 TRACP01848 142 aa10.86□□□□□ -0.67
USP11-205ENST00000467378 CD164Q04900 197 aa10.86□□□□□ -0.67
USP11-205ENST00000467378 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
USP11-205ENST00000467378 RETNLBQ9BQ08 111 aa10.86□□□□□ -0.67
USP11-205ENST00000467378 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
USP11-205ENST00000467378 CRCT1Q9UGL9 99 aa10.85□□□□□ -0.67
USP11-205ENST00000467378 NDUFV3P56181 108 aaKnown RBP10.84□□□□□ -0.67
USP11-205ENST00000467378 TAX1BP3O14907 124 aa10.83□□□□□ -0.68
USP11-205ENST00000467378 FABP2P12104 132 aa10.83□□□□□ -0.68
USP11-205ENST00000467378 H3BQ85 93 aa10.82□□□□□ -0.68
USP11-205ENST00000467378 Q6JHZ5 121 aa10.82□□□□□ -0.68
USP11-205ENST00000467378 IGFL1Q6UW32 110 aa10.82□□□□□ -0.68
USP11-205ENST00000467378 H3BUT2 72 aa10.81□□□□□ -0.68
USP11-205ENST00000467378 TCL1BO95988 128 aa10.81□□□□□ -0.68
USP11-205ENST00000467378 C9orf118A6NHY6 69 aa10.8□□□□□ -0.68
USP11-205ENST00000467378 FSIP2Q5CZC0 6907 aa10.8□□□□□ -0.68
USP11-205ENST00000467378 TMEM256-PLSCR3K7ERE1 68 aa10.79□□□□□ -0.68
USP11-205ENST00000467378 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
USP11-205ENST00000467378 ATXN8Q156A1 80 aa10.78□□□□□ -0.68
USP11-205ENST00000467378 H3BMG7 143 aa10.77□□□□□ -0.69
USP11-205ENST00000467378 LIMD2Q9BT23 127 aa10.77□□□□□ -0.69
USP11-205ENST00000467378 LYRM7Q5U5X0 104 aa10.76□□□□□ -0.69
USP11-205ENST00000467378 PCP4L1A6NKN8 68 aa10.75□□□□□ -0.69
USP11-205ENST00000467378 UBE2V1Q13404 147 aa10.75□□□□□ -0.69
USP11-205ENST00000467378 Q5XG85 94 aa10.75□□□□□ -0.69
USP11-205ENST00000467378 FP248Q71RG6 208 aaPredicted RBP10.74□□□□□ -0.69
USP11-205ENST00000467378 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
USP11-205ENST00000467378 TRBV20-1A0A075B6N2 111 aa10.73□□□□□ -0.69
USP11-205ENST00000467378 BAALC-AS2P0C853 105 aa10.73□□□□□ -0.69
USP11-205ENST00000467378 A0A1W2PPM0 123 aa10.72□□□□□ -0.69
USP11-205ENST00000467378 MUC17Q685J3 4493 aa10.71□□□□□ -0.69
USP11-205ENST00000467378 COL5A1-AS1Q5SY13 56 aa10.71□□□□□ -0.69
USP11-205ENST00000467378 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
USP11-205ENST00000467378 TRBV7-7A0A0K0K1E9 115 aa10.7□□□□□ -0.7
USP11-205ENST00000467378 Q6Q795 121 aa10.69□□□□□ -0.7
USP11-205ENST00000467378 A0A1B0GV72 72 aa10.67□□□□□ -0.7
USP11-205ENST00000467378 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
USP11-205ENST00000467378 ANKRD29Q8N6D5 301 aa10.67□□□□□ -0.7
USP11-205ENST00000467378 TPRXLQ17RH7 258 aa10.66□□□□□ -0.7
USP11-205ENST00000467378 C1orf195Q5TG92 126 aa10.65□□□□□ -0.7
USP11-205ENST00000467378 A0A1W2PNM2 257 aa10.64□□□□□ -0.71
USP11-205ENST00000467378 C9JAW5 83 aa10.63□□□□□ -0.71
USP11-205ENST00000467378 ASB16-AS1Q495Z4 193 aa10.63□□□□□ -0.71
USP11-205ENST00000467378 RBM3P98179 157 aaKnown RBP10.62□□□□□ -0.71
USP11-205ENST00000467378 TRBV7-4A0A0J9YYF1 115 aa10.61□□□□□ -0.71
USP11-205ENST00000467378 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
USP11-205ENST00000467378 SPCS1Q9Y6A9 102 aa10.59□□□□□ -0.71
USP11-205ENST00000467378 A0A087WSZ3 146 aa10.57□□□□□ -0.72
USP11-205ENST00000467378 JMJD7-PLA2G4BH0Y9G9 81 aa10.57□□□□□ -0.72
USP11-205ENST00000467378 DSCR8Q96T75 97 aa10.57□□□□□ -0.72
USP11-205ENST00000467378 CCKP06307 115 aa10.56□□□□□ -0.72
USP11-205ENST00000467378 SS18L2Q9UHA2 77 aa10.56□□□□□ -0.72
USP11-205ENST00000467378 H3BT86 120 aa10.55□□□□□ -0.72
USP11-205ENST00000467378 MTURNQ8N3F0 131 aa10.54□□□□□ -0.72
USP11-205ENST00000467378 OBSCN-AS1Q96MR7 158 aa10.53□□□□□ -0.72
USP11-205ENST00000467378 K7EP34 96 aa10.5□□□□□ -0.73
USP11-205ENST00000467378 LOC110117498A0A087WWA1 95 aa10.49□□□□□ -0.73
USP11-205ENST00000467378 Q6ZQT0 140 aa10.49□□□□□ -0.73
USP11-205ENST00000467378 Q96NJ1 140 aa10.49□□□□□ -0.73
USP11-205ENST00000467378 VPS25Q9BRG1 176 aa10.49□□□□□ -0.73
USP11-205ENST00000467378 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
USP11-205ENST00000467378 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
USP11-205ENST00000467378 PDE6GP18545 87 aa10.46□□□□□ -0.73
USP11-205ENST00000467378 PRO0461Q9UI25 63 aa10.46□□□□□ -0.73
USP11-205ENST00000467378 C9orf92A6NGG3 77 aa10.45□□□□□ -0.74
USP11-205ENST00000467378 XP32Q5T750 250 aa10.44□□□□□ -0.74
USP11-205ENST00000467378 GTF2H5Q6ZYL4 71 aa10.42□□□□□ -0.74
USP11-205ENST00000467378 LINC00472Q9H8W2 130 aa10.41□□□□□ -0.74
USP11-205ENST00000467378 A0A1B0GW54 56 aa10.4□□□□□ -0.74
USP11-205ENST00000467378 C21orf62-AS1Q17RA5 79 aa10.4□□□□□ -0.74
USP11-205ENST00000467378 KRTAP4-1Q9BYQ7 146 aa10.39□□□□□ -0.75
USP11-205ENST00000467378 DEFB116Q30KQ4 102 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms