RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ETDCA0A1B0GVM5 59 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 H3BT86 120 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 UBE2BP63146 152 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 KRTAP11-1Q8IUC1 163 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 PPDPFLQ8WWR9 84 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 CLEC2BQ92478 149 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 FAM218AQ96MZ4 157 aa3.37□□□□□ -1.87
VPS41-211ENST00000466017 H3BMG7 143 aa3.36□□□□□ -1.87
VPS41-211ENST00000466017 TMEM256-PLSCR3K7ERE1 68 aa3.36□□□□□ -1.87
VPS41-211ENST00000466017 XGP55808 180 aa3.36□□□□□ -1.87
VPS41-211ENST00000466017 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
VPS41-211ENST00000466017 SCXQ7RTU7 201 aa3.36□□□□□ -1.87
VPS41-211ENST00000466017 PRO0461Q9UI25 63 aa3.36□□□□□ -1.87
VPS41-211ENST00000466017 ZNF861PO60384 105 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 DNAL4O96015 105 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 BAALC-AS2P0C853 105 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 SPRR1BP22528 89 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 Q9BRP9 147 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
VPS41-211ENST00000466017 IGLV5-48A0A075B6I7 105 aa3.34□□□□□ -1.87
VPS41-211ENST00000466017 C9JAW5 83 aa3.34□□□□□ -1.87
VPS41-211ENST00000466017 ANKRD29Q8N6D5 301 aa3.34□□□□□ -1.87
VPS41-211ENST00000466017 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.87
VPS41-211ENST00000466017 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.87
VPS41-211ENST00000466017 JMJD7-PLA2G4BH0Y9G9 81 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 CDK2AP2O75956 126 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 IGLV7-43P04211 117 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 UBE2AP49459 152 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 OBSCN-AS1Q96MR7 158 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 RYR3Q15413 4870 aa3.33□□□□□ -1.88
VPS41-211ENST00000466017 APOBP04114 4563 aaKnown RBP3.32□□□□□ -1.88
VPS41-211ENST00000466017 TEX49A0A1B0GTD5 131 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 ERC2-IT1O76042 136 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 MT3P25713 68 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 C1orf137Q5JT78 98 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 Q6ZQY7 126 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 Q8N377 158 aa3.32□□□□□ -1.88
VPS41-211ENST00000466017 PRLHP81277 87 aa3.31□□□□□ -1.88
VPS41-211ENST00000466017 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
VPS41-211ENST00000466017 ZNF706Q9Y5V0 76 aaPredicted RBP3.31□□□□□ -1.88
VPS41-211ENST00000466017 IGLV8-61A0A075B6I0 122 aa3.3□□□□□ -1.88
VPS41-211ENST00000466017 PDE6GP18545 87 aa3.3□□□□□ -1.88
VPS41-211ENST00000466017 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
VPS41-211ENST00000466017 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
VPS41-211ENST00000466017 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
VPS41-211ENST00000466017 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
VPS41-211ENST00000466017 HIGD2AQ9BW72 106 aa3.3□□□□□ -1.88
VPS41-211ENST00000466017 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
VPS41-211ENST00000466017 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
VPS41-211ENST00000466017 ETDBQ3ZM63 59 aa3.29□□□□□ -1.88
VPS41-211ENST00000466017 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
VPS41-211ENST00000466017 SPRR4Q96PI1 79 aa3.29□□□□□ -1.88
VPS41-211ENST00000466017 LOC110117498A0A087WWA1 95 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 TRBV7-4A0A0J9YYF1 115 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 A0A1B0GW54 56 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 RBM3P98179 157 aaKnown RBP3.28□□□□□ -1.88
VPS41-211ENST00000466017 FAM229BQ4G0N7 80 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 MTURNQ8N3F0 131 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 LAMTOR3Q9UHA4 124 aa3.28□□□□□ -1.88
VPS41-211ENST00000466017 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
VPS41-211ENST00000466017 FAT1Q14517 4588 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 RYR1P21817 5038 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 J3QR89 54 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 ACYP1P07311 99 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 HAMPP81172 84 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 Q6JHZ5 121 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 GAGE2AQ6NT46 116 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 Q6Q795 121 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 DEFB105AQ8NG35 78 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 DSCR8Q96T75 97 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 VPS13BQ7Z7G8 4022 aa3.26□□□□□ -1.89
VPS41-211ENST00000466017 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
VPS41-211ENST00000466017 F8WEM9 126 aa3.25□□□□□ -1.89
VPS41-211ENST00000466017 SMR3BP02814 79 aaPredicted RBP3.25□□□□□ -1.89
VPS41-211ENST00000466017 CCKP06307 115 aa3.25□□□□□ -1.89
VPS41-211ENST00000466017 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
VPS41-211ENST00000466017 Q6ZQT0 140 aa3.25□□□□□ -1.89
VPS41-211ENST00000466017 K7ERU9 68 aa3.24□□□□□ -1.89
VPS41-211ENST00000466017 HSPG2P98160 4391 aa3.23□□□□□ -1.89
VPS41-211ENST00000466017 CRYGAP11844 174 aa3.23□□□□□ -1.89
VPS41-211ENST00000466017 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
VPS41-211ENST00000466017 CD164Q04900 197 aa3.23□□□□□ -1.89
VPS41-211ENST00000466017 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
VPS41-211ENST00000466017 IGFL1Q6UW32 110 aa3.22□□□□□ -1.89
VPS41-211ENST00000466017 C3orf22Q8N5N4 141 aa3.22□□□□□ -1.89
VPS41-211ENST00000466017 Q8NBF4 154 aa3.22□□□□□ -1.89
VPS41-211ENST00000466017 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
VPS41-211ENST00000466017 TRBV7-7A0A0K0K1E9 115 aa3.21□□□□□ -1.9
VPS41-211ENST00000466017 A0A1W2PNM2 257 aa3.21□□□□□ -1.9
VPS41-211ENST00000466017 Q5VSD8 79 aa3.21□□□□□ -1.9
VPS41-211ENST00000466017 Q5XG85 94 aa3.21□□□□□ -1.9
VPS41-211ENST00000466017 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
VPS41-211ENST00000466017 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
VPS41-211ENST00000466017 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms