RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 FAT1Q14517 4588 aa6.64□□□□□ -1.35
SMNDC1-203ENST00000460483 LINC01600Q96MT4 127 aa6.63□□□□□ -1.35
SMNDC1-203ENST00000460483 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 F8WEM9 126 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 TRACP01848 142 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 FABP2P12104 132 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 ATXN8Q156A1 80 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 LINC00483Q53H64 154 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
SMNDC1-203ENST00000460483 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
SMNDC1-203ENST00000460483 SPRR1BP22528 89 aa6.61□□□□□ -1.35
SMNDC1-203ENST00000460483 Q6ZQY7 126 aa6.61□□□□□ -1.35
SMNDC1-203ENST00000460483 DEFB105AQ8NG35 78 aa6.61□□□□□ -1.35
SMNDC1-203ENST00000460483 SRRM2Q9UQ35 2752 aaKnown RBP6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 IGLV5-48A0A075B6I7 105 aa6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 H3BUT2 72 aa6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 TMEM256-PLSCR3K7ERE1 68 aa6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 ORMDL1Q9P0S3 153 aa6.6□□□□□ -1.35
SMNDC1-203ENST00000460483 LST1O00453 97 aa6.59□□□□□ -1.35
SMNDC1-203ENST00000460483 TYMSOSQ8TAI1 123 aa6.59□□□□□ -1.35
SMNDC1-203ENST00000460483 HERC2O95714 4834 aa6.59□□□□□ -1.36
SMNDC1-203ENST00000460483 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
SMNDC1-203ENST00000460483 SSBP3-AS1Q7Z2R9 100 aa6.58□□□□□ -1.36
SMNDC1-203ENST00000460483 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
SMNDC1-203ENST00000460483 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
SMNDC1-203ENST00000460483 A0A1W2PPM0 123 aa6.57□□□□□ -1.36
SMNDC1-203ENST00000460483 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
SMNDC1-203ENST00000460483 VPS13BQ7Z7G8 4022 aa6.56□□□□□ -1.36
SMNDC1-203ENST00000460483 C9orf153Q5TBE3 101 aa6.56□□□□□ -1.36
SMNDC1-203ENST00000460483 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
SMNDC1-203ENST00000460483 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
SMNDC1-203ENST00000460483 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
SMNDC1-203ENST00000460483 Q8NBF4 154 aa6.55□□□□□ -1.36
SMNDC1-203ENST00000460483 FAM218AQ96MZ4 157 aa6.55□□□□□ -1.36
SMNDC1-203ENST00000460483 Q6JHZ5 121 aa6.54□□□□□ -1.36
SMNDC1-203ENST00000460483 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
SMNDC1-203ENST00000460483 Q8N377 158 aa6.54□□□□□ -1.36
SMNDC1-203ENST00000460483 TCL1BO95988 128 aa6.53□□□□□ -1.36
SMNDC1-203ENST00000460483 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
SMNDC1-203ENST00000460483 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
SMNDC1-203ENST00000460483 ANAPC11Q9NYG5 84 aa6.53□□□□□ -1.36
SMNDC1-203ENST00000460483 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
SMNDC1-203ENST00000460483 A0A087X002 238 aa6.52□□□□□ -1.37
SMNDC1-203ENST00000460483 KRTAP10-8P60410 259 aa6.52□□□□□ -1.37
SMNDC1-203ENST00000460483 MOBPQ13875 183 aa6.52□□□□□ -1.37
SMNDC1-203ENST00000460483 BAALC-AS2P0C853 105 aa6.51□□□□□ -1.37
SMNDC1-203ENST00000460483 NDUFV3P56181 108 aaKnown RBP6.51□□□□□ -1.37
SMNDC1-203ENST00000460483 LINC01547P58512 204 aaPredicted RBP6.51□□□□□ -1.37
SMNDC1-203ENST00000460483 C21orf62-AS1Q17RA5 79 aa6.51□□□□□ -1.37
SMNDC1-203ENST00000460483 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
SMNDC1-203ENST00000460483 SPINK1P00995 79 aa6.5□□□□□ -1.37
SMNDC1-203ENST00000460483 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
SMNDC1-203ENST00000460483 C9JAW5 83 aa6.49□□□□□ -1.37
SMNDC1-203ENST00000460483 H3BMG7 143 aa6.49□□□□□ -1.37
SMNDC1-203ENST00000460483 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
SMNDC1-203ENST00000460483 H3BT86 120 aa6.48□□□□□ -1.37
SMNDC1-203ENST00000460483 CD164Q04900 197 aa6.48□□□□□ -1.37
SMNDC1-203ENST00000460483 KRTAP13-2Q52LG2 175 aa6.48□□□□□ -1.37
SMNDC1-203ENST00000460483 SMIM29Q86T20 159 aa6.48□□□□□ -1.37
SMNDC1-203ENST00000460483 IGLV8-61A0A075B6I0 122 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 PDE6GP18545 87 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 C3orf22Q8N5N4 141 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 DSCR8Q96T75 97 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 LIMD2Q9BT23 127 aa6.47□□□□□ -1.37
SMNDC1-203ENST00000460483 K7EP34 96 aa6.46□□□□□ -1.38
SMNDC1-203ENST00000460483 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-203ENST00000460483 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
SMNDC1-203ENST00000460483 F8W1H4 67 aa6.43□□□□□ -1.38
SMNDC1-203ENST00000460483 TEN1Q86WV5 123 aa6.42□□□□□ -1.38
SMNDC1-203ENST00000460483 SS18L2Q9UHA2 77 aa6.42□□□□□ -1.38
SMNDC1-203ENST00000460483 A0A1B0GW54 56 aa6.41□□□□□ -1.38
SMNDC1-203ENST00000460483 IGFL1Q6UW32 110 aa6.41□□□□□ -1.38
SMNDC1-203ENST00000460483 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.38
SMNDC1-203ENST00000460483 Q6Q795 121 aa6.4□□□□□ -1.38
SMNDC1-203ENST00000460483 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
SMNDC1-203ENST00000460483 ABCA13Q86UQ4 5058 aa6.39□□□□□ -1.39
SMNDC1-203ENST00000460483 Q5XG85 94 aa6.38□□□□□ -1.39
SMNDC1-203ENST00000460483 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SMNDC1-203ENST00000460483 CCKP06307 115 aa6.37□□□□□ -1.39
SMNDC1-203ENST00000460483 HRCT1Q6UXD1 115 aa6.37□□□□□ -1.39
SMNDC1-203ENST00000460483 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
SMNDC1-203ENST00000460483 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
SMNDC1-203ENST00000460483 A0A1B0GV72 72 aa6.35□□□□□ -1.39
SMNDC1-203ENST00000460483 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
SMNDC1-203ENST00000460483 VPS25Q9BRG1 176 aa6.35□□□□□ -1.39
SMNDC1-203ENST00000460483 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
SMNDC1-203ENST00000460483 MTURNQ8N3F0 131 aa6.34□□□□□ -1.39
SMNDC1-203ENST00000460483 OBSCN-AS1Q96MR7 158 aa6.34□□□□□ -1.39
SMNDC1-203ENST00000460483 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
SMNDC1-203ENST00000460483 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
SMNDC1-203ENST00000460483 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
SMNDC1-203ENST00000460483 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
SMNDC1-203ENST00000460483 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
SMNDC1-203ENST00000460483 DMBT1Q9UGM3 2413 aaPredicted RBP6.32□□□□□ -1.4
SMNDC1-203ENST00000460483 PCLOQ9Y6V0 5065 aa6.32□□□□□ -1.4
SMNDC1-203ENST00000460483 A0A087WSZ3 146 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms