RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 MOBPQ13875 183 aa6.76□□□□□ -1.33
HERC4-207ENST00000460168 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
HERC4-207ENST00000460168 ASB16-AS1Q495Z4 193 aa6.75□□□□□ -1.33
HERC4-207ENST00000460168 H0YGX0 51 aa6.74□□□□□ -1.33
HERC4-207ENST00000460168 IGKV2-28A0A075B6P5 120 aa6.73□□□□□ -1.33
HERC4-207ENST00000460168 M0R2N4 97 aa6.73□□□□□ -1.33
HERC4-207ENST00000460168 IGKV2D-28P01615 120 aa6.73□□□□□ -1.33
HERC4-207ENST00000460168 ORMDL1Q9P0S3 153 aa6.73□□□□□ -1.33
HERC4-207ENST00000460168 A0A087X002 238 aa6.72□□□□□ -1.33
HERC4-207ENST00000460168 XAGE1AQ9HD64 81 aa6.72□□□□□ -1.33
HERC4-207ENST00000460168 BPY2O14599 106 aa6.72□□□□□ -1.33
HERC4-207ENST00000460168 OCR1Q9BZK8 76 aa6.72□□□□□ -1.33
HERC4-207ENST00000460168 LOC101927531A0A1B0GV80 90 aa6.71□□□□□ -1.34
HERC4-207ENST00000460168 SLPIP03973 132 aa6.71□□□□□ -1.34
HERC4-207ENST00000460168 LY6G6CO95867 125 aa6.7□□□□□ -1.34
HERC4-207ENST00000460168 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
HERC4-207ENST00000460168 SCXQ7RTU7 201 aa6.7□□□□□ -1.34
HERC4-207ENST00000460168 DNAH10Q8IVF4 4471 aa6.7□□□□□ -1.34
HERC4-207ENST00000460168 A0A087WYN8 130 aa6.7□□□□□ -1.34
HERC4-207ENST00000460168 A6NED7 52 aa6.7□□□□□ -1.34
HERC4-207ENST00000460168 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
HERC4-207ENST00000460168 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
HERC4-207ENST00000460168 C14orf177Q52M58 125 aa6.69□□□□□ -1.34
HERC4-207ENST00000460168 LCE6AA0A183 80 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 Q8NDZ9 215 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 VPS13DQ5THJ4 4388 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.68□□□□□ -1.34
HERC4-207ENST00000460168 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
HERC4-207ENST00000460168 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 LINC00167Q96N53 147 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
HERC4-207ENST00000460168 TLX1NBP0CAT3 122 aa6.67□□□□□ -1.34
HERC4-207ENST00000460168 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
HERC4-207ENST00000460168 SMIM11BQ8TCY0 68 aa6.66□□□□□ -1.34
HERC4-207ENST00000460168 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
HERC4-207ENST00000460168 Q6ZR54 194 aa6.66□□□□□ -1.34
HERC4-207ENST00000460168 NOTCH2NLQ7Z3S9 236 aa6.66□□□□□ -1.34
HERC4-207ENST00000460168 KMT2AQ03164 3969 aa6.66□□□□□ -1.34
HERC4-207ENST00000460168 CNBPP62633 177 aaKnown RBP6.65□□□□□ -1.34
HERC4-207ENST00000460168 HAMPP81172 84 aa6.65□□□□□ -1.35
HERC4-207ENST00000460168 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
HERC4-207ENST00000460168 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
HERC4-207ENST00000460168 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
HERC4-207ENST00000460168 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
HERC4-207ENST00000460168 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
HERC4-207ENST00000460168 C1orf134Q5TEV5 83 aa6.63□□□□□ -1.35
HERC4-207ENST00000460168 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
HERC4-207ENST00000460168 Q6ZQT0 140 aa6.62□□□□□ -1.35
HERC4-207ENST00000460168 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
HERC4-207ENST00000460168 Q8N814 137 aa6.61□□□□□ -1.35
HERC4-207ENST00000460168 A0A087WTM6 91 aa6.6□□□□□ -1.35
HERC4-207ENST00000460168 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
HERC4-207ENST00000460168 FAM168BA1KXE4 195 aa6.6□□□□□ -1.35
HERC4-207ENST00000460168 Q9BRP9 147 aa6.6□□□□□ -1.35
HERC4-207ENST00000460168 A0A096LNI7 61 aa6.59□□□□□ -1.35
HERC4-207ENST00000460168 C9orf163Q8N9P6 203 aa6.59□□□□□ -1.35
HERC4-207ENST00000460168 PDE6GP18545 87 aa6.58□□□□□ -1.36
HERC4-207ENST00000460168 DNAH2Q9P225 4427 aa6.57□□□□□ -1.36
HERC4-207ENST00000460168 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
HERC4-207ENST00000460168 NDUFB1O75438 58 aa6.56□□□□□ -1.36
HERC4-207ENST00000460168 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
HERC4-207ENST00000460168 CHTF8P0CG12 524 aa6.55□□□□□ -1.36
HERC4-207ENST00000460168 RPL37AP8A6NKH3 93 aa6.54□□□□□ -1.36
HERC4-207ENST00000460168 RTL8CO15255 209 aa6.54□□□□□ -1.36
HERC4-207ENST00000460168 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
HERC4-207ENST00000460168 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
HERC4-207ENST00000460168 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
HERC4-207ENST00000460168 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
HERC4-207ENST00000460168 IGLV1-50A0A075B6I6 118 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 IGKV4-1P06312 121 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 COX7BP24311 80 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 PLAC8Q9NZF1 115 aa6.52□□□□□ -1.37
HERC4-207ENST00000460168 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
HERC4-207ENST00000460168 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
HERC4-207ENST00000460168 PANO1I0J062 215 aa6.49□□□□□ -1.37
HERC4-207ENST00000460168 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
HERC4-207ENST00000460168 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
HERC4-207ENST00000460168 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 HYDINQ4G0P3 5121 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 ETDCA0A1B0GVM5 59 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 A0A1B0GW54 56 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
HERC4-207ENST00000460168 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 Q6ZQY7 126 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
HERC4-207ENST00000460168 ROMO1P60602 79 aa6.46□□□□□ -1.37
HERC4-207ENST00000460168 SPRR1AP35321 89 aa6.46□□□□□ -1.38
HERC4-207ENST00000460168 Q6ZRX8 168 aa6.46□□□□□ -1.38
HERC4-207ENST00000460168 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
HERC4-207ENST00000460168 H3BQ85 93 aa6.45□□□□□ -1.38
HERC4-207ENST00000460168 KRTAP10-2P60368 255 aa6.45□□□□□ -1.38
HERC4-207ENST00000460168 A0A1W2PNM2 257 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms