RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 Q1RN00 199 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 H3BQ85 93 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 CFC1P0CG37 223 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.29□□□□□ -1.4
UBR4-208ENST00000459947 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
UBR4-208ENST00000459947 LINC00575Q6W349 94 aa6.28□□□□□ -1.4
UBR4-208ENST00000459947 IGLV5-48A0A075B6I7 105 aa6.28□□□□□ -1.4
UBR4-208ENST00000459947 hADV29S1A0JD25 119 aa6.28□□□□□ -1.4
UBR4-208ENST00000459947 SPINK1P00995 79 aa6.27□□□□□ -1.41
UBR4-208ENST00000459947 COX6CP09669 75 aa6.27□□□□□ -1.41
UBR4-208ENST00000459947 SEC61GP60059 68 aa6.27□□□□□ -1.41
UBR4-208ENST00000459947 F8WEM9 126 aa6.27□□□□□ -1.41
UBR4-208ENST00000459947 C9orf153Q5TBE3 101 aa6.26□□□□□ -1.41
UBR4-208ENST00000459947 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
UBR4-208ENST00000459947 C3orf22Q8N5N4 141 aa6.26□□□□□ -1.41
UBR4-208ENST00000459947 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
UBR4-208ENST00000459947 FXYD2P54710 66 aa6.25□□□□□ -1.41
UBR4-208ENST00000459947 CD164Q04900 197 aa6.25□□□□□ -1.41
UBR4-208ENST00000459947 MOBPQ13875 183 aa6.25□□□□□ -1.41
UBR4-208ENST00000459947 IGLV9-49A0A0B4J1Y8 123 aa6.24□□□□□ -1.41
UBR4-208ENST00000459947 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
UBR4-208ENST00000459947 H7C2G1 150 aa6.24□□□□□ -1.41
UBR4-208ENST00000459947 SCGB1C2P0DMR2 95 aa6.24□□□□□ -1.41
UBR4-208ENST00000459947 LIMD2Q9BT23 127 aa6.24□□□□□ -1.41
UBR4-208ENST00000459947 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
UBR4-208ENST00000459947 Q6JHZ5 121 aa6.23□□□□□ -1.41
UBR4-208ENST00000459947 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
UBR4-208ENST00000459947 PSMB2P49721 201 aa6.22□□□□□ -1.41
UBR4-208ENST00000459947 DEFB105AQ8NG35 78 aa6.22□□□□□ -1.41
UBR4-208ENST00000459947 Q6ZQY7 126 aa6.21□□□□□ -1.42
UBR4-208ENST00000459947 TSPAN13O95857 204 aa6.2□□□□□ -1.42
UBR4-208ENST00000459947 ETDBQ3ZM63 59 aa6.2□□□□□ -1.42
UBR4-208ENST00000459947 DNAL4O96015 105 aa6.19□□□□□ -1.42
UBR4-208ENST00000459947 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
UBR4-208ENST00000459947 J3KT08 172 aa6.19□□□□□ -1.42
UBR4-208ENST00000459947 Q8N377 158 aa6.18□□□□□ -1.42
UBR4-208ENST00000459947 PRR4Q16378 134 aa6.18□□□□□ -1.42
UBR4-208ENST00000459947 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
UBR4-208ENST00000459947 TRIAP1O43715 76 aa6.17□□□□□ -1.42
UBR4-208ENST00000459947 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
UBR4-208ENST00000459947 A0A0U1RQV1 116 aa6.17□□□□□ -1.42
UBR4-208ENST00000459947 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
UBR4-208ENST00000459947 TRACP01848 142 aa6.16□□□□□ -1.42
UBR4-208ENST00000459947 Q5XG85 94 aa6.16□□□□□ -1.42
UBR4-208ENST00000459947 ORMDL1Q9P0S3 153 aa6.15□□□□□ -1.42
UBR4-208ENST00000459947 TNXBP22105 4242 aa6.14□□□□□ -1.43
UBR4-208ENST00000459947 K7ERJ3 54 aa6.14□□□□□ -1.43
UBR4-208ENST00000459947 TCL1BO95988 128 aa6.14□□□□□ -1.43
UBR4-208ENST00000459947 CLEC2BQ92478 149 aa6.13□□□□□ -1.43
UBR4-208ENST00000459947 IGLV7-46A0A075B6I9 117 aa6.13□□□□□ -1.43
UBR4-208ENST00000459947 K7EP34 96 aa6.13□□□□□ -1.43
UBR4-208ENST00000459947 TMEM256-PLSCR3K7ERE1 68 aa6.13□□□□□ -1.43
UBR4-208ENST00000459947 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
UBR4-208ENST00000459947 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
UBR4-208ENST00000459947 C1orf195Q5TG92 126 aa6.11□□□□□ -1.43
UBR4-208ENST00000459947 C9JAW5 83 aa6.11□□□□□ -1.43
UBR4-208ENST00000459947 TAX1BP3O14907 124 aa6.11□□□□□ -1.43
UBR4-208ENST00000459947 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
UBR4-208ENST00000459947 LST1O00453 97 aa6.1□□□□□ -1.43
UBR4-208ENST00000459947 ATXN8Q156A1 80 aa6.1□□□□□ -1.43
UBR4-208ENST00000459947 Q6Q795 121 aa6.1□□□□□ -1.43
UBR4-208ENST00000459947 C9orf118A6NHY6 69 aa6.09□□□□□ -1.43
UBR4-208ENST00000459947 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
UBR4-208ENST00000459947 ASB16-AS1Q495Z4 193 aa6.09□□□□□ -1.43
UBR4-208ENST00000459947 HRCT1Q6UXD1 115 aa6.08□□□□□ -1.44
UBR4-208ENST00000459947 TRBV7-7A0A0K0K1E9 115 aa6.07□□□□□ -1.44
UBR4-208ENST00000459947 IGFL1Q6UW32 110 aa6.07□□□□□ -1.44
UBR4-208ENST00000459947 TEN1Q86WV5 123 aa6.07□□□□□ -1.44
UBR4-208ENST00000459947 H3BMG7 143 aa6.06□□□□□ -1.44
UBR4-208ENST00000459947 CCDC179H3BU77 68 aa6.06□□□□□ -1.44
UBR4-208ENST00000459947 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
UBR4-208ENST00000459947 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
UBR4-208ENST00000459947 F8W1H4 67 aa6.05□□□□□ -1.44
UBR4-208ENST00000459947 A0A1W2PPM0 123 aa6.05□□□□□ -1.44
UBR4-208ENST00000459947 CDIP1Q9H305 208 aa6.04□□□□□ -1.44
UBR4-208ENST00000459947 ANKRD29Q8N6D5 301 aa6.04□□□□□ -1.44
UBR4-208ENST00000459947 JMJD7-PLA2G4BH0Y9G9 81 aa6.02□□□□□ -1.45
UBR4-208ENST00000459947 PDE6GP18545 87 aa6.02□□□□□ -1.45
UBR4-208ENST00000459947 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
UBR4-208ENST00000459947 FAM236DA0A1B0GTK5 79 aa6.02□□□□□ -1.45
UBR4-208ENST00000459947 FAM236CP0DP71 79 aa6.02□□□□□ -1.45
UBR4-208ENST00000459947 A0A1B0GW54 56 aa6.01□□□□□ -1.45
UBR4-208ENST00000459947 TRBV7-4A0A0J9YYF1 115 aa6.01□□□□□ -1.45
UBR4-208ENST00000459947 RBM3P98179 157 aaKnown RBP6□□□□□ -1.45
UBR4-208ENST00000459947 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
UBR4-208ENST00000459947 DSCR8Q96T75 97 aa6□□□□□ -1.45
UBR4-208ENST00000459947 H3BT86 120 aa5.99□□□□□ -1.45
UBR4-208ENST00000459947 HERC1Q15751 4861 aa5.98□□□□□ -1.45
UBR4-208ENST00000459947 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
UBR4-208ENST00000459947 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
UBR4-208ENST00000459947 FAM236AA0A1B0GUQ0 79 aa5.97□□□□□ -1.45
UBR4-208ENST00000459947 FAM236BA0A1B0GV22 79 aa5.97□□□□□ -1.45
UBR4-208ENST00000459947 PRO0628Q9UI54 55 aa5.96□□□□□ -1.46
UBR4-208ENST00000459947 A0A087WSZ3 146 aa5.95□□□□□ -1.46
UBR4-208ENST00000459947 CCKP06307 115 aa5.95□□□□□ -1.46
UBR4-208ENST00000459947 A0A0G2JQZ4 141 aa5.94□□□□□ -1.46
UBR4-208ENST00000459947 LOC110117498A0A087WWA1 95 aa5.94□□□□□ -1.46
UBR4-208ENST00000459947 A0A1W2PNM2 257 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms