RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
TOP3B-213ENST00000457179 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 SERTAD4-AS1Q5TG53 156 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 KRTAP1-5Q9BYS1 174 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 DNAH3Q8TD57 4116 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 DSCR10P59022 87 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 UBE2BP63146 152 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 FBN3Q75N90 2809 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 NKAPP1Q8N9T2 125 aa8.72□□□□□ -1.01
TOP3B-213ENST00000457179 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.01
TOP3B-213ENST00000457179 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
TOP3B-213ENST00000457179 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
TOP3B-213ENST00000457179 C16orf90A8MZG2 172 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 DNAH7Q8WXX0 4024 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 B9D2Q9BPU9 175 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 A0A1W2PNN7 141 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 UBE2AP49459 152 aa8.69□□□□□ -1.02
TOP3B-213ENST00000457179 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
TOP3B-213ENST00000457179 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
TOP3B-213ENST00000457179 DNAH9Q9NYC9 4486 aa8.68□□□□□ -1.02
TOP3B-213ENST00000457179 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
TOP3B-213ENST00000457179 C7orf33Q8WU49 177 aa8.67□□□□□ -1.02
TOP3B-213ENST00000457179 MP68P56378 58 aa8.66□□□□□ -1.02
TOP3B-213ENST00000457179 Q8NBF4 154 aa8.66□□□□□ -1.02
TOP3B-213ENST00000457179 A6NED7 52 aa8.65□□□□□ -1.02
TOP3B-213ENST00000457179 NDUFB1O75438 58 aa8.65□□□□□ -1.02
TOP3B-213ENST00000457179 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
TOP3B-213ENST00000457179 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
TOP3B-213ENST00000457179 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
TOP3B-213ENST00000457179 LCA10Q71F78 164 aa8.61□□□□□ -1.03
TOP3B-213ENST00000457179 Q9BRP9 147 aa8.6□□□□□ -1.03
TOP3B-213ENST00000457179 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
TOP3B-213ENST00000457179 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
TOP3B-213ENST00000457179 APLNQ9ULZ1 77 aa8.6□□□□□ -1.03
TOP3B-213ENST00000457179 KCNQ1DNQ9H478 68 aa8.59□□□□□ -1.03
TOP3B-213ENST00000457179 H0Y9P7 68 aa8.57□□□□□ -1.04
TOP3B-213ENST00000457179 Q6ZRX8 168 aa8.57□□□□□ -1.04
TOP3B-213ENST00000457179 DHRS4-AS1Q9P1J3 65 aa8.57□□□□□ -1.04
TOP3B-213ENST00000457179 TNP2Q05952 138 aa8.56□□□□□ -1.04
TOP3B-213ENST00000457179 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
TOP3B-213ENST00000457179 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
TOP3B-213ENST00000457179 A0A096LNI7 61 aa8.55□□□□□ -1.04
TOP3B-213ENST00000457179 ATP11AUNQ6ZP68 121 aa8.55□□□□□ -1.04
TOP3B-213ENST00000457179 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
TOP3B-213ENST00000457179 A0A1B0GW54 56 aa8.54□□□□□ -1.04
TOP3B-213ENST00000457179 A0A087WSZ3 146 aa8.54□□□□□ -1.04
TOP3B-213ENST00000457179 LINC00476Q8WZB0 136 aa8.54□□□□□ -1.04
TOP3B-213ENST00000457179 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
TOP3B-213ENST00000457179 PRLHP81277 87 aa8.52□□□□□ -1.05
TOP3B-213ENST00000457179 KMT2AQ03164 3969 aa8.52□□□□□ -1.05
TOP3B-213ENST00000457179 A6NN06 94 aa8.51□□□□□ -1.05
TOP3B-213ENST00000457179 NDUFS5O43920 106 aa8.51□□□□□ -1.05
TOP3B-213ENST00000457179 COA5Q86WW8 74 aa8.51□□□□□ -1.05
TOP3B-213ENST00000457179 LY6G6CO95867 125 aa8.51□□□□□ -1.05
TOP3B-213ENST00000457179 NBDYA0A0U1RRE5 68 aa8.5□□□□□ -1.05
TOP3B-213ENST00000457179 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
TOP3B-213ENST00000457179 Q75L30 129 aa8.5□□□□□ -1.05
TOP3B-213ENST00000457179 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
TOP3B-213ENST00000457179 CASC2Q6XLA1 102 aa8.49□□□□□ -1.05
TOP3B-213ENST00000457179 DNAH1Q9P2D7 4330 aa8.49□□□□□ -1.05
TOP3B-213ENST00000457179 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
TOP3B-213ENST00000457179 IGFL1Q6UW32 110 aa8.48□□□□□ -1.05
TOP3B-213ENST00000457179 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
TOP3B-213ENST00000457179 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
TOP3B-213ENST00000457179 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
TOP3B-213ENST00000457179 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
TOP3B-213ENST00000457179 C7orf65Q6ZTY9 151 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 CDC42SE1Q9NRR8 79 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 LOC101927531A0A1B0GV80 90 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 PANO1I0J062 215 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 MOBPQ13875 183 aa8.45□□□□□ -1.06
TOP3B-213ENST00000457179 KRTAP29-1A8MX34 341 aaPredicted RBP8.43□□□□□ -1.06
TOP3B-213ENST00000457179 SPRR1AP35321 89 aa8.42□□□□□ -1.06
TOP3B-213ENST00000457179 KRTAP21-3Q3LHN1 58 aa8.42□□□□□ -1.06
TOP3B-213ENST00000457179 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
TOP3B-213ENST00000457179 C9orf163Q8N9P6 203 aa8.41□□□□□ -1.06
TOP3B-213ENST00000457179 SPINK7P58062 85 aa8.41□□□□□ -1.06
TOP3B-213ENST00000457179 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
TOP3B-213ENST00000457179 KRTAP11-1Q8IUC1 163 aa8.4□□□□□ -1.06
TOP3B-213ENST00000457179 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.07
TOP3B-213ENST00000457179 H0Y9J4 135 aa8.4□□□□□ -1.07
TOP3B-213ENST00000457179 H3BPC8 53 aa8.38□□□□□ -1.07
TOP3B-213ENST00000457179 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
TOP3B-213ENST00000457179 PRAC1Q96KF2 57 aa8.38□□□□□ -1.07
TOP3B-213ENST00000457179 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
TOP3B-213ENST00000457179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
TOP3B-213ENST00000457179 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
TOP3B-213ENST00000457179 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
TOP3B-213ENST00000457179 A0A087WTM6 91 aa8.33□□□□□ -1.08
TOP3B-213ENST00000457179 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
TOP3B-213ENST00000457179 A8MWP4 228 aa8.33□□□□□ -1.08
TOP3B-213ENST00000457179 LINC01558Q9Y6Z2 57 aa8.32□□□□□ -1.08
TOP3B-213ENST00000457179 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
TOP3B-213ENST00000457179 LINC00313P59037 77 aa8.31□□□□□ -1.08
TOP3B-213ENST00000457179 RTL8CO15255 209 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms