RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 VAMP3Q15836 100 aa6.38□□□□□ -1.39
PDGFB-204ENST00000455790 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
PDGFB-204ENST00000455790 TCL1BO95988 128 aa6.36□□□□□ -1.39
PDGFB-204ENST00000455790 S100A6P06703 90 aa6.36□□□□□ -1.39
PDGFB-204ENST00000455790 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
PDGFB-204ENST00000455790 SCGB1D1O95968 90 aa6.35□□□□□ -1.39
PDGFB-204ENST00000455790 CLEC2BQ92478 149 aa6.35□□□□□ -1.39
PDGFB-204ENST00000455790 HIST1H4GQ99525 98 aa6.35□□□□□ -1.39
PDGFB-204ENST00000455790 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
PDGFB-204ENST00000455790 COX8AP10176 69 aa6.34□□□□□ -1.39
PDGFB-204ENST00000455790 Q6JHZ5 121 aa6.34□□□□□ -1.39
PDGFB-204ENST00000455790 H3BUT2 72 aa6.33□□□□□ -1.4
PDGFB-204ENST00000455790 S100A1P23297 94 aa6.33□□□□□ -1.4
PDGFB-204ENST00000455790 OCIAD2Q56VL3 154 aa6.33□□□□□ -1.4
PDGFB-204ENST00000455790 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.33□□□□□ -1.4
PDGFB-204ENST00000455790 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
PDGFB-204ENST00000455790 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
PDGFB-204ENST00000455790 DLEU1O43261 78 aa6.3□□□□□ -1.4
PDGFB-204ENST00000455790 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
PDGFB-204ENST00000455790 CFC1P0CG37 223 aa6.3□□□□□ -1.4
PDGFB-204ENST00000455790 C14orf144Q96I85 54 aa6.3□□□□□ -1.4
PDGFB-204ENST00000455790 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
PDGFB-204ENST00000455790 PPDPFLQ8WWR9 84 aa6.29□□□□□ -1.4
PDGFB-204ENST00000455790 FAM218AQ96MZ4 157 aa6.29□□□□□ -1.4
PDGFB-204ENST00000455790 SNHG12Q9BXW3 62 aa6.29□□□□□ -1.4
PDGFB-204ENST00000455790 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
PDGFB-204ENST00000455790 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
PDGFB-204ENST00000455790 C2orf91Q6ZV80 131 aa6.28□□□□□ -1.4
PDGFB-204ENST00000455790 OBSCN-AS1Q96MR7 158 aa6.28□□□□□ -1.4
PDGFB-204ENST00000455790 PAM16Q9Y3D7 125 aa6.28□□□□□ -1.4
PDGFB-204ENST00000455790 A0A0B4J2C4 111 aa6.26□□□□□ -1.41
PDGFB-204ENST00000455790 SPATA45Q537H7 98 aa6.26□□□□□ -1.41
PDGFB-204ENST00000455790 RAB37Q96AX2 223 aa6.26□□□□□ -1.41
PDGFB-204ENST00000455790 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
PDGFB-204ENST00000455790 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
PDGFB-204ENST00000455790 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
PDGFB-204ENST00000455790 LST1O00453 97 aa6.24□□□□□ -1.41
PDGFB-204ENST00000455790 Q75L30 129 aa6.24□□□□□ -1.41
PDGFB-204ENST00000455790 VAMP8Q9BV40 100 aa6.23□□□□□ -1.41
PDGFB-204ENST00000455790 M0R2T5 61 aa6.22□□□□□ -1.41
PDGFB-204ENST00000455790 NDUFV3P56181 108 aaKnown RBP6.22□□□□□ -1.41
PDGFB-204ENST00000455790 Q6Q795 121 aa6.22□□□□□ -1.41
PDGFB-204ENST00000455790 H0YGX0 51 aa6.21□□□□□ -1.42
PDGFB-204ENST00000455790 FXYD2P54710 66 aa6.21□□□□□ -1.42
PDGFB-204ENST00000455790 CEND1Q8N111 149 aa6.21□□□□□ -1.42
PDGFB-204ENST00000455790 A0A087WSZ3 146 aa6.2□□□□□ -1.42
PDGFB-204ENST00000455790 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
PDGFB-204ENST00000455790 Q96NJ1 140 aa6.2□□□□□ -1.42
PDGFB-204ENST00000455790 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
PDGFB-204ENST00000455790 TRIAP1O43715 76 aa6.19□□□□□ -1.42
PDGFB-204ENST00000455790 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
PDGFB-204ENST00000455790 PRO1854Q9UHT4 67 aa6.19□□□□□ -1.42
PDGFB-204ENST00000455790 H3BMG7 143 aa6.18□□□□□ -1.42
PDGFB-204ENST00000455790 SNCGO76070 127 aa6.18□□□□□ -1.42
PDGFB-204ENST00000455790 FABP2P12104 132 aa6.18□□□□□ -1.42
PDGFB-204ENST00000455790 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
PDGFB-204ENST00000455790 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
PDGFB-204ENST00000455790 A0A1B0GV72 72 aa6.16□□□□□ -1.42
PDGFB-204ENST00000455790 A0A1B0GX51 115 aa6.16□□□□□ -1.42
PDGFB-204ENST00000455790 K7ERJ3 54 aa6.16□□□□□ -1.42
PDGFB-204ENST00000455790 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
PDGFB-204ENST00000455790 A6NJY4 79 aa6.15□□□□□ -1.42
PDGFB-204ENST00000455790 A8MUU9 505 aa6.15□□□□□ -1.42
PDGFB-204ENST00000455790 DSCR10P59022 87 aa6.15□□□□□ -1.42
PDGFB-204ENST00000455790 PYY3Q5JQD4 70 aa6.13□□□□□ -1.43
PDGFB-204ENST00000455790 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
PDGFB-204ENST00000455790 HSD52Q0P140 79 aa6.11□□□□□ -1.43
PDGFB-204ENST00000455790 GHRHP01286 108 aa6.1□□□□□ -1.43
PDGFB-204ENST00000455790 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
PDGFB-204ENST00000455790 DNAL4O96015 105 aa6.09□□□□□ -1.43
PDGFB-204ENST00000455790 PSMB2P49721 201 aa6.09□□□□□ -1.43
PDGFB-204ENST00000455790 TRBV7-4A0A0J9YYF1 115 aa6.08□□□□□ -1.44
PDGFB-204ENST00000455790 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
PDGFB-204ENST00000455790 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
PDGFB-204ENST00000455790 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
PDGFB-204ENST00000455790 ANKRD29Q8N6D5 301 aa6.08□□□□□ -1.44
PDGFB-204ENST00000455790 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
PDGFB-204ENST00000455790 CCKP06307 115 aa6.05□□□□□ -1.44
PDGFB-204ENST00000455790 LINC00313P59037 77 aa6.05□□□□□ -1.44
PDGFB-204ENST00000455790 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
PDGFB-204ENST00000455790 TMEM256-PLSCR3K7ERE1 68 aa6.04□□□□□ -1.44
PDGFB-204ENST00000455790 TRBV20-1A0A075B6N2 111 aa6.03□□□□□ -1.44
PDGFB-204ENST00000455790 H3BQ85 93 aa6.03□□□□□ -1.44
PDGFB-204ENST00000455790 TRACP01848 142 aa6.03□□□□□ -1.44
PDGFB-204ENST00000455790 COX6CP09669 75 aa6.03□□□□□ -1.44
PDGFB-204ENST00000455790 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
PDGFB-204ENST00000455790 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
PDGFB-204ENST00000455790 IGHV6-1A0A0B4J1U7 121 aa6.02□□□□□ -1.45
PDGFB-204ENST00000455790 UQCR10Q9UDW1 63 aa6.02□□□□□ -1.45
PDGFB-204ENST00000455790 UBE2V1Q13404 147 aa6.01□□□□□ -1.45
PDGFB-204ENST00000455790 VPS25Q9BRG1 176 aa6□□□□□ -1.45
PDGFB-204ENST00000455790 HRES1P13985 223 aa5.99□□□□□ -1.45
PDGFB-204ENST00000455790 MPLKIPQ8TAP9 179 aa5.99□□□□□ -1.45
PDGFB-204ENST00000455790 FAM236DA0A1B0GTK5 79 aa5.97□□□□□ -1.45
PDGFB-204ENST00000455790 SCGB1C2P0DMR2 95 aa5.97□□□□□ -1.45
PDGFB-204ENST00000455790 FAM236CP0DP71 79 aa5.97□□□□□ -1.45
PDGFB-204ENST00000455790 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
PDGFB-204ENST00000455790 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
PDGFB-204ENST00000455790 USH2AO75445 5202 aa5.96□□□□□ -1.46
PDGFB-204ENST00000455790 MT2AP02795 61 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms