RNA–Protein interactions for RNA: ENST00000455394.5

KIF3C-204, Transcript of kinesin family member 3C, humanhuman

TSL 1 (best)

Gene KIF3C, Length 5,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3C-204ENST00000455394 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
KIF3C-204ENST00000455394 CAMK2N1Q7Z7J9 78 aa9.07□□□□□ -0.96
KIF3C-204ENST00000455394 TEP1Q99973 2627 aaKnown RBP9.07□□□□□ -0.96
KIF3C-204ENST00000455394 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
KIF3C-204ENST00000455394 TRANK1O15050 2925 aa9.05□□□□□ -0.96
KIF3C-204ENST00000455394 CHD7Q9P2D1 2997 aa9.05□□□□□ -0.96
KIF3C-204ENST00000455394 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
KIF3C-204ENST00000455394 DMAC1Q96GE9 116 aa9.03□□□□□ -0.96
KIF3C-204ENST00000455394 CHD6Q8TD26 2715 aa9.02□□□□□ -0.96
KIF3C-204ENST00000455394 OCR1Q9BZK8 76 aa9.02□□□□□ -0.97
KIF3C-204ENST00000455394 COL6A5A8TX70 2615 aa9.01□□□□□ -0.97
KIF3C-204ENST00000455394 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
KIF3C-204ENST00000455394 STAB1Q9NY15 2570 aa8.97□□□□□ -0.97
KIF3C-204ENST00000455394 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
KIF3C-204ENST00000455394 HRES1P13985 223 aa8.92□□□□□ -0.98
KIF3C-204ENST00000455394 PRAC1Q96KF2 57 aa8.9□□□□□ -0.98
KIF3C-204ENST00000455394 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
KIF3C-204ENST00000455394 HTTP42858 3142 aa8.88□□□□□ -0.99
KIF3C-204ENST00000455394 PRRC2CQ9Y520 2896 aaKnown RBP8.88□□□□□ -0.99
KIF3C-204ENST00000455394 AKAP13Q12802 2813 aa8.86□□□□□ -0.99
KIF3C-204ENST00000455394 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
KIF3C-204ENST00000455394 SPINK7P58062 85 aa8.84□□□□□ -0.99
KIF3C-204ENST00000455394 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
KIF3C-204ENST00000455394 RPS29P62273 56 aaKnown RBP8.83□□□□□ -1
KIF3C-204ENST00000455394 SPRR1BP22528 89 aa8.82□□□□□ -1
KIF3C-204ENST00000455394 KRTAP26-1Q6PEX3 210 aa8.82□□□□□ -1
KIF3C-204ENST00000455394 SPRR1AP35321 89 aa8.81□□□□□ -1
KIF3C-204ENST00000455394 TEX15Q9BXT5 2789 aa8.79□□□□□ -1
KIF3C-204ENST00000455394 CYSTM1Q9H1C7 97 aa8.79□□□□□ -1
KIF3C-204ENST00000455394 S4R3F8 94 aa8.78□□□□□ -1
KIF3C-204ENST00000455394 Q5VV11 94 aa8.77□□□□□ -1
KIF3C-204ENST00000455394 ZCCHC13Q8WW36 166 aaKnown RBP8.77□□□□□ -1
KIF3C-204ENST00000455394 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
KIF3C-204ENST00000455394 ITPR2Q14571 2701 aa8.73□□□□□ -1.01
KIF3C-204ENST00000455394 ROMO1P60602 79 aa8.73□□□□□ -1.01
KIF3C-204ENST00000455394 C5orf42Q9H799 3197 aa8.73□□□□□ -1.01
KIF3C-204ENST00000455394 TNRC18O15417 2968 aaPredicted RBP8.72□□□□□ -1.01
KIF3C-204ENST00000455394 CENPEQ02224 2701 aa8.72□□□□□ -1.01
KIF3C-204ENST00000455394 BPTFQ12830 3046 aa8.72□□□□□ -1.01
KIF3C-204ENST00000455394 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
KIF3C-204ENST00000455394 R4GN34 69 aa8.7□□□□□ -1.02
KIF3C-204ENST00000455394 ASB16-AS1Q495Z4 193 aa8.69□□□□□ -1.02
KIF3C-204ENST00000455394 KRTAP16-1A8MUX0 517 aa8.67□□□□□ -1.02
KIF3C-204ENST00000455394 Q5W150 140 aa8.66□□□□□ -1.02
KIF3C-204ENST00000455394 BRCA2P51587 3418 aa8.64□□□□□ -1.03
KIF3C-204ENST00000455394 DSPP15924 2871 aaKnown RBP8.63□□□□□ -1.03
KIF3C-204ENST00000455394 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
KIF3C-204ENST00000455394 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
KIF3C-204ENST00000455394 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
KIF3C-204ENST00000455394 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
KIF3C-204ENST00000455394 PANO1I0J062 215 aa8.56□□□□□ -1.04
KIF3C-204ENST00000455394 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
KIF3C-204ENST00000455394 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
KIF3C-204ENST00000455394 MKI67P46013 3256 aaKnown RBP8.54□□□□□ -1.04
KIF3C-204ENST00000455394 MGAQ8IWI9 3026 aa8.54□□□□□ -1.04
KIF3C-204ENST00000455394 UBR5O95071 2799 aaPredicted RBP8.53□□□□□ -1.04
KIF3C-204ENST00000455394 M0QZ58 72 aa8.5□□□□□ -1.05
KIF3C-204ENST00000455394 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
KIF3C-204ENST00000455394 A0A087X002 238 aa8.47□□□□□ -1.05
KIF3C-204ENST00000455394 NOTCH1P46531 2555 aa8.46□□□□□ -1.05
KIF3C-204ENST00000455394 PLAC4Q8WY50 150 aa8.46□□□□□ -1.06
KIF3C-204ENST00000455394 LAMA2P24043 3122 aaKnown RBP8.45□□□□□ -1.06
KIF3C-204ENST00000455394 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
KIF3C-204ENST00000455394 LAMA3Q16787 3333 aa8.43□□□□□ -1.06
KIF3C-204ENST00000455394 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
KIF3C-204ENST00000455394 A0A0C4DFX4 3053 aa8.41□□□□□ -1.06
KIF3C-204ENST00000455394 MAP1AP78559 2803 aaPredicted RBP8.41□□□□□ -1.06
KIF3C-204ENST00000455394 SPATA8Q6RVD6 105 aa8.37□□□□□ -1.07
KIF3C-204ENST00000455394 Q8NDZ9 215 aa8.36□□□□□ -1.07
KIF3C-204ENST00000455394 UNC80Q8N2C7 3258 aa8.35□□□□□ -1.07
KIF3C-204ENST00000455394 A6NN06 94 aa8.35□□□□□ -1.07
KIF3C-204ENST00000455394 CFAP54Q96N23 3096 aa8.34□□□□□ -1.07
KIF3C-204ENST00000455394 KRTAP4-16G5E9R7 235 aaPredicted RBP8.34□□□□□ -1.07
KIF3C-204ENST00000455394 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
KIF3C-204ENST00000455394 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
KIF3C-204ENST00000455394 FLNCQ14315 2725 aa8.32□□□□□ -1.08
KIF3C-204ENST00000455394 APCP25054 2843 aa8.32□□□□□ -1.08
KIF3C-204ENST00000455394 TPRXLQ17RH7 258 aa8.31□□□□□ -1.08
KIF3C-204ENST00000455394 CDH23Q9H251 3354 aa8.29□□□□□ -1.08
KIF3C-204ENST00000455394 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
KIF3C-204ENST00000455394 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
KIF3C-204ENST00000455394 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
KIF3C-204ENST00000455394 STAB2Q8WWQ8 2551 aa8.27□□□□□ -1.09
KIF3C-204ENST00000455394 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
KIF3C-204ENST00000455394 ITPR1Q14643 2758 aa8.25□□□□□ -1.09
KIF3C-204ENST00000455394 UTP20O75691 2785 aaKnown RBP8.2□□□□□ -1.1
KIF3C-204ENST00000455394 NDUFAF8A1L188 74 aa8.19□□□□□ -1.1
KIF3C-204ENST00000455394 ASH1LQ9NR48 2969 aaKnown RBP8.18□□□□□ -1.1
KIF3C-204ENST00000455394 PRUNE2Q8WUY3 3088 aa8.18□□□□□ -1.1
KIF3C-204ENST00000455394 WDFY4Q6ZS81 3184 aa8.14□□□□□ -1.11
KIF3C-204ENST00000455394 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
KIF3C-204ENST00000455394 EYSQ5T1H1 3165 aa8.14□□□□□ -1.11
KIF3C-204ENST00000455394 DNAH14Q0VDD8 3507 aa8.14□□□□□ -1.11
KIF3C-204ENST00000455394 TRIOO75962 3097 aa8.09□□□□□ -1.11
KIF3C-204ENST00000455394 SZT2Q5T011 3432 aa8.08□□□□□ -1.12
KIF3C-204ENST00000455394 XIRP2A4UGR9 3374 aa8.07□□□□□ -1.12
KIF3C-204ENST00000455394 A8MU10 97 aa8.07□□□□□ -1.12
KIF3C-204ENST00000455394 KRTAP7-1Q8IUC3 87 aa8.06□□□□□ -1.12
KIF3C-204ENST00000455394 A8MUU9 505 aa8.06□□□□□ -1.12
KIF3C-204ENST00000455394 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms