RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ANAPC11Q9NYG5 84 aa7.65□□□□□ -1.18
SEC16A-207ENST00000453963 GCN1Q92616 2671 aaKnown RBP7.65□□□□□ -1.18
SEC16A-207ENST00000453963 CR1P17927 2039 aa7.65□□□□□ -1.19
SEC16A-207ENST00000453963 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
SEC16A-207ENST00000453963 C9orf92A6NGG3 77 aa7.64□□□□□ -1.19
SEC16A-207ENST00000453963 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
SEC16A-207ENST00000453963 UNC80Q8N2C7 3258 aa7.63□□□□□ -1.19
SEC16A-207ENST00000453963 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
SEC16A-207ENST00000453963 BAHCC1Q9P281 2608 aa7.62□□□□□ -1.19
SEC16A-207ENST00000453963 Q75L30 129 aa7.61□□□□□ -1.19
SEC16A-207ENST00000453963 PRR26Q8N8Z3 221 aa7.61□□□□□ -1.19
SEC16A-207ENST00000453963 Q8NDZ9 215 aa7.59□□□□□ -1.19
SEC16A-207ENST00000453963 FAM229BQ4G0N7 80 aa7.58□□□□□ -1.2
SEC16A-207ENST00000453963 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
SEC16A-207ENST00000453963 RBM12B-AS1Q9P1G2 102 aa7.58□□□□□ -1.2
SEC16A-207ENST00000453963 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
SEC16A-207ENST00000453963 SPRR1AP35321 89 aa7.56□□□□□ -1.2
SEC16A-207ENST00000453963 NSD1Q96L73 2696 aaPredicted RBP7.56□□□□□ -1.2
SEC16A-207ENST00000453963 LINC01558Q9Y6Z2 57 aa7.55□□□□□ -1.2
SEC16A-207ENST00000453963 DNAH14Q0VDD8 3507 aa7.53□□□□□ -1.2
SEC16A-207ENST00000453963 Q8N1X5 172 aa7.52□□□□□ -1.21
SEC16A-207ENST00000453963 MMP24-AS1A0A0U1RRL7 71 aa7.52□□□□□ -1.21
SEC16A-207ENST00000453963 OXTP01178 125 aa7.51□□□□□ -1.21
SEC16A-207ENST00000453963 VPS13AQ96RL7 3174 aa7.51□□□□□ -1.21
SEC16A-207ENST00000453963 FLNCQ14315 2725 aa7.5□□□□□ -1.21
SEC16A-207ENST00000453963 NBEAL2Q6ZNJ1 2754 aa7.5□□□□□ -1.21
SEC16A-207ENST00000453963 TNP2Q05952 138 aa7.5□□□□□ -1.21
SEC16A-207ENST00000453963 HRES1P13985 223 aa7.49□□□□□ -1.21
SEC16A-207ENST00000453963 Q5VV11 94 aa7.49□□□□□ -1.21
SEC16A-207ENST00000453963 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
SEC16A-207ENST00000453963 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
SEC16A-207ENST00000453963 STAB2Q8WWQ8 2551 aa7.47□□□□□ -1.21
SEC16A-207ENST00000453963 A0A0D9SG42 100 aa7.47□□□□□ -1.21
SEC16A-207ENST00000453963 SPRR1BP22528 89 aa7.47□□□□□ -1.21
SEC16A-207ENST00000453963 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
SEC16A-207ENST00000453963 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
SEC16A-207ENST00000453963 ITPR1Q14643 2758 aa7.45□□□□□ -1.22
SEC16A-207ENST00000453963 FRYQ5TBA9 3013 aa7.44□□□□□ -1.22
SEC16A-207ENST00000453963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
SEC16A-207ENST00000453963 A0A1B0GU33 70 aa7.41□□□□□ -1.22
SEC16A-207ENST00000453963 TACC2O95359 2948 aa7.4□□□□□ -1.22
SEC16A-207ENST00000453963 Q6ZSA8 131 aa7.4□□□□□ -1.22
SEC16A-207ENST00000453963 ITPR2Q14571 2701 aa7.39□□□□□ -1.23
SEC16A-207ENST00000453963 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
SEC16A-207ENST00000453963 NBEAQ8NFP9 2946 aa7.36□□□□□ -1.23
SEC16A-207ENST00000453963 VCANP13611 3396 aa7.36□□□□□ -1.23
SEC16A-207ENST00000453963 SPINK7P58062 85 aa7.36□□□□□ -1.23
SEC16A-207ENST00000453963 LAMA1P25391 3075 aa7.36□□□□□ -1.23
SEC16A-207ENST00000453963 REV3LO60673 3130 aa7.36□□□□□ -1.23
SEC16A-207ENST00000453963 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
SEC16A-207ENST00000453963 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
SEC16A-207ENST00000453963 FRYLO94915 3013 aa7.34□□□□□ -1.23
SEC16A-207ENST00000453963 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
SEC16A-207ENST00000453963 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
SEC16A-207ENST00000453963 Q5W150 140 aa7.33□□□□□ -1.24
SEC16A-207ENST00000453963 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
SEC16A-207ENST00000453963 ATMQ13315 3056 aa7.32□□□□□ -1.24
SEC16A-207ENST00000453963 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
SEC16A-207ENST00000453963 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
SEC16A-207ENST00000453963 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
SEC16A-207ENST00000453963 DMXL2Q8TDJ6 3036 aa7.29□□□□□ -1.24
SEC16A-207ENST00000453963 KRTAP4-16G5E9R7 235 aaPredicted RBP7.29□□□□□ -1.24
SEC16A-207ENST00000453963 HIVEP1P15822 2718 aa7.28□□□□□ -1.24
SEC16A-207ENST00000453963 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.24
SEC16A-207ENST00000453963 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
SEC16A-207ENST00000453963 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
SEC16A-207ENST00000453963 CSAG1Q6PB30 78 aa7.26□□□□□ -1.25
SEC16A-207ENST00000453963 Q6ZR54 194 aa7.25□□□□□ -1.25
SEC16A-207ENST00000453963 SPEGQ15772 3267 aa7.25□□□□□ -1.25
SEC16A-207ENST00000453963 SZT2Q5T011 3432 aa7.24□□□□□ -1.25
SEC16A-207ENST00000453963 FREM2Q5SZK8 3169 aa7.23□□□□□ -1.25
SEC16A-207ENST00000453963 TENM4Q6N022 2769 aa7.22□□□□□ -1.25
SEC16A-207ENST00000453963 H3BS24 57 aa7.22□□□□□ -1.25
SEC16A-207ENST00000453963 UTP20O75691 2785 aaKnown RBP7.22□□□□□ -1.25
SEC16A-207ENST00000453963 ASB16-AS1Q495Z4 193 aa7.22□□□□□ -1.25
SEC16A-207ENST00000453963 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.25
SEC16A-207ENST00000453963 KALRNO60229 2985 aa7.21□□□□□ -1.26
SEC16A-207ENST00000453963 M0R2T5 61 aa7.2□□□□□ -1.26
SEC16A-207ENST00000453963 LINC00483Q53H64 154 aa7.2□□□□□ -1.26
SEC16A-207ENST00000453963 BOD1L1Q8NFC6 3051 aa7.2□□□□□ -1.26
SEC16A-207ENST00000453963 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
SEC16A-207ENST00000453963 ADGRG4Q8IZF6 3080 aa7.18□□□□□ -1.26
SEC16A-207ENST00000453963 S4R3F8 94 aa7.18□□□□□ -1.26
SEC16A-207ENST00000453963 LCE6AA0A183 80 aa7.17□□□□□ -1.26
SEC16A-207ENST00000453963 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.26
SEC16A-207ENST00000453963 ZZEF1O43149 2961 aa7.15□□□□□ -1.27
SEC16A-207ENST00000453963 R4GN34 69 aa7.12□□□□□ -1.27
SEC16A-207ENST00000453963 CELSR2Q9HCU4 2923 aa7.11□□□□□ -1.27
SEC16A-207ENST00000453963 KRTAP10-1P60331 282 aa7.11□□□□□ -1.27
SEC16A-207ENST00000453963 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
SEC16A-207ENST00000453963 KRTAP10-2P60368 255 aa7.1□□□□□ -1.27
SEC16A-207ENST00000453963 RPL37P61927 97 aaKnown RBP7.1□□□□□ -1.27
SEC16A-207ENST00000453963 SPATA8Q6RVD6 105 aa7.09□□□□□ -1.27
SEC16A-207ENST00000453963 ROMO1P60602 79 aa7.08□□□□□ -1.28
SEC16A-207ENST00000453963 APCP25054 2843 aa7.08□□□□□ -1.28
SEC16A-207ENST00000453963 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
SEC16A-207ENST00000453963 COL6A3P12111 3177 aa7.07□□□□□ -1.28
SEC16A-207ENST00000453963 LRBAP50851 2863 aa7.07□□□□□ -1.28
SEC16A-207ENST00000453963 A6NN06 94 aa7.07□□□□□ -1.28
SEC16A-207ENST00000453963 Q5VSD8 79 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms