RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DEPDC5O75140 1603 aa-0.19□□□□□ -2.44
HMGN3P1-201ENST00000453847 PDE4DIPQ5VU43 2346 aa-0.19□□□□□ -2.44
HMGN3P1-201ENST00000453847 ZANQ9Y493 2812 aa-0.19□□□□□ -2.44
HMGN3P1-201ENST00000453847 DEFA5Q01523 94 aa-0.2□□□□□ -2.44
HMGN3P1-201ENST00000453847 CDC42BPGQ6DT37 1551 aa-0.2□□□□□ -2.44
HMGN3P1-201ENST00000453847 STAB1Q9NY15 2570 aa-0.2□□□□□ -2.44
HMGN3P1-201ENST00000453847 LYSTQ99698 3801 aa-0.2□□□□□ -2.44
HMGN3P1-201ENST00000453847 C3orf79P0CE67 100 aa-0.21□□□□□ -2.44
HMGN3P1-201ENST00000453847 ZC3H13Q5T200 1668 aaKnown RBP-0.22□□□□□ -2.44
HMGN3P1-201ENST00000453847 MUC2Q02817 5179 aa-0.22□□□□□ -2.44
HMGN3P1-201ENST00000453847 TNRC18O15417 2968 aaPredicted RBP-0.22□□□□□ -2.45
HMGN3P1-201ENST00000453847 FLGP20930 4061 aaPredicted RBP-0.23□□□□□ -2.45
HMGN3P1-201ENST00000453847 DIP2AQ14689 1571 aa-0.23□□□□□ -2.45
HMGN3P1-201ENST00000453847 MACF1Q9UPN3 7388 aaKnown RBP-0.23□□□□□ -2.45
HMGN3P1-201ENST00000453847 KRTAP6-2Q3LI66 62 aa-0.23□□□□□ -2.45
HMGN3P1-201ENST00000453847 MAP1AP78559 2803 aaPredicted RBP-0.23□□□□□ -2.45
HMGN3P1-201ENST00000453847 ABCA9Q8IUA7 1624 aa-0.24□□□□□ -2.45
HMGN3P1-201ENST00000453847 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
HMGN3P1-201ENST00000453847 NBASA2RRP1 2371 aa-0.24□□□□□ -2.45
HMGN3P1-201ENST00000453847 NHSQ6T4R5 1651 aa-0.24□□□□□ -2.45
HMGN3P1-201ENST00000453847 LYNX1G3V0Z9 82 aa-0.26□□□□□ -2.45
HMGN3P1-201ENST00000453847 H3BVH4 76 aa-0.26□□□□□ -2.45
HMGN3P1-201ENST00000453847 DSPP15924 2871 aaKnown RBP-0.26□□□□□ -2.45
HMGN3P1-201ENST00000453847 RALGAPBQ86X10 1494 aa-0.27□□□□□ -2.45
HMGN3P1-201ENST00000453847 KCNQ1DNQ9H478 68 aa-0.27□□□□□ -2.45
HMGN3P1-201ENST00000453847 ASXL1Q8IXJ9 1541 aa-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 HFM1A2PYH4 1435 aa-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 DEFB131BA0A096LNP1 70 aa-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 ENHOQ6UWT2 76 aa-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 HECTD1Q9ULT8 2610 aa-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 PRRC2CQ9Y520 2896 aaKnown RBP-0.28□□□□□ -2.45
HMGN3P1-201ENST00000453847 SMCO4Q9NRQ5 59 aa-0.29□□□□□ -2.46
HMGN3P1-201ENST00000453847 HILPDAQ9Y5L2 63 aa-0.29□□□□□ -2.46
HMGN3P1-201ENST00000453847 THOC2Q8NI27 1593 aaKnown RBP-0.29□□□□□ -2.46
HMGN3P1-201ENST00000453847 DEFB130BP0DP73 79 aa-0.3□□□□□ -2.46
HMGN3P1-201ENST00000453847 DEFB130AP0DP74 79 aa-0.3□□□□□ -2.46
HMGN3P1-201ENST00000453847 SPRR2AP35326 72 aa-0.3□□□□□ -2.46
HMGN3P1-201ENST00000453847 DUOX2Q9NRD8 1548 aa-0.3□□□□□ -2.46
HMGN3P1-201ENST00000453847 INO80Q9ULG1 1556 aaPredicted RBP-0.31□□□□□ -2.46
HMGN3P1-201ENST00000453847 DNMBPQ6XZF7 1577 aa-0.32□□□□□ -2.46
HMGN3P1-201ENST00000453847 H0YGG7 62 aa-0.32□□□□□ -2.46
HMGN3P1-201ENST00000453847 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
HMGN3P1-201ENST00000453847 SETD2Q9BYW2 2564 aaPredicted RBP-0.32□□□□□ -2.46
HMGN3P1-201ENST00000453847 MADDQ8WXG6 1647 aa-0.33□□□□□ -2.46
HMGN3P1-201ENST00000453847 IAPPP10997 89 aa-0.33□□□□□ -2.46
HMGN3P1-201ENST00000453847 CRIP1P50238 77 aa-0.33□□□□□ -2.46
HMGN3P1-201ENST00000453847 KRTAP6-1Q3LI64 71 aa-0.33□□□□□ -2.46
HMGN3P1-201ENST00000453847 SPTBN4Q9H254 2564 aa-0.34□□□□□ -2.46
HMGN3P1-201ENST00000453847 BPTFQ12830 3046 aa-0.34□□□□□ -2.46
HMGN3P1-201ENST00000453847 UBL5Q9BZL1 73 aa-0.34□□□□□ -2.46
HMGN3P1-201ENST00000453847 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
HMGN3P1-201ENST00000453847 PDCD5O14737 125 aa-0.35□□□□□ -2.47
HMGN3P1-201ENST00000453847 C3P01024 1663 aa-0.35□□□□□ -2.47
HMGN3P1-201ENST00000453847 ITSN2Q9NZM3 1697 aa-0.35□□□□□ -2.47
HMGN3P1-201ENST00000453847 SRRM2Q9UQ35 2752 aaKnown RBP-0.35□□□□□ -2.47
HMGN3P1-201ENST00000453847 KIAA0586Q9BVV6 1533 aa-0.36□□□□□ -2.47
HMGN3P1-201ENST00000453847 ATXN8Q156A1 80 aa-0.37□□□□□ -2.47
HMGN3P1-201ENST00000453847 CUBNO60494 3623 aa-0.38□□□□□ -2.47
HMGN3P1-201ENST00000453847 SONP18583 2426 aaKnown RBP-0.38□□□□□ -2.47
HMGN3P1-201ENST00000453847 MRPL33O75394 65 aaKnown RBP-0.38□□□□□ -2.47
HMGN3P1-201ENST00000453847 PDZD2O15018 2839 aa-0.38□□□□□ -2.47
HMGN3P1-201ENST00000453847 DNAH9Q9NYC9 4486 aa-0.39□□□□□ -2.47
HMGN3P1-201ENST00000453847 NF1P21359 2839 aa-0.39□□□□□ -2.47
HMGN3P1-201ENST00000453847 ZZEF1O43149 2961 aa-0.39□□□□□ -2.47
HMGN3P1-201ENST00000453847 SPRR2EP22531 72 aa-0.39□□□□□ -2.47
HMGN3P1-201ENST00000453847 FAT3Q8TDW7 4589 aa-0.39□□□□□ -2.47
HMGN3P1-201ENST00000453847 ETDCA0A1B0GVM5 59 aa-0.4□□□□□ -2.47
HMGN3P1-201ENST00000453847 MROH1Q8NDA8 1641 aa-0.4□□□□□ -2.47
HMGN3P1-201ENST00000453847 PKHD1L1Q86WI1 4243 aa-0.4□□□□□ -2.47
HMGN3P1-201ENST00000453847 STAB2Q8WWQ8 2551 aa-0.41□□□□□ -2.47
HMGN3P1-201ENST00000453847 NBEAL1Q6ZS30 2694 aa-0.41□□□□□ -2.48
HMGN3P1-201ENST00000453847 ANKRD36CQ5JPF3 1778 aa-0.42□□□□□ -2.48
HMGN3P1-201ENST00000453847 KRTAP19-7Q3SYF9 63 aa-0.42□□□□□ -2.48
HMGN3P1-201ENST00000453847 TGP01266 2768 aa-0.42□□□□□ -2.48
HMGN3P1-201ENST00000453847 MUC12Q9UKN1 5478 aa-0.43□□□□□ -2.48
HMGN3P1-201ENST00000453847 PRLHP81277 87 aa-0.43□□□□□ -2.48
HMGN3P1-201ENST00000453847 ANK3Q12955 4377 aaKnown RBP-0.44□□□□□ -2.48
HMGN3P1-201ENST00000453847 DSTQ03001 7570 aaKnown RBP-0.44□□□□□ -2.48
HMGN3P1-201ENST00000453847 AKAP9Q99996 3911 aa-0.44□□□□□ -2.48
HMGN3P1-201ENST00000453847 DNAH6Q9C0G6 4158 aa-0.44□□□□□ -2.48
HMGN3P1-201ENST00000453847 DMXL1Q9Y485 3027 aa-0.45□□□□□ -2.48
HMGN3P1-201ENST00000453847 S4R3F8 94 aa-0.45□□□□□ -2.48
HMGN3P1-201ENST00000453847 EFCAB5A4FU69 1503 aa-0.45□□□□□ -2.48
HMGN3P1-201ENST00000453847 KIF1AQ12756 1690 aa-0.46□□□□□ -2.48
HMGN3P1-201ENST00000453847 ABCC6O95255 1503 aa-0.46□□□□□ -2.48
HMGN3P1-201ENST00000453847 DEFB114Q30KQ6 69 aa-0.46□□□□□ -2.48
HMGN3P1-201ENST00000453847 GNG13Q9P2W3 67 aa-0.46□□□□□ -2.48
HMGN3P1-201ENST00000453847 H3BNG1 76 aa-0.47□□□□□ -2.48
HMGN3P1-201ENST00000453847 DEFB106AQ8N104 65 aa-0.47□□□□□ -2.48
HMGN3P1-201ENST00000453847 APOBP04114 4563 aaKnown RBP-0.47□□□□□ -2.48
HMGN3P1-201ENST00000453847 LAMA5O15230 3695 aa-0.47□□□□□ -2.48
HMGN3P1-201ENST00000453847 DNAH3Q8TD57 4116 aa-0.47□□□□□ -2.49
HMGN3P1-201ENST00000453847 CEP290O15078 2479 aa-0.47□□□□□ -2.49
HMGN3P1-201ENST00000453847 HTTP42858 3142 aa-0.48□□□□□ -2.49
HMGN3P1-201ENST00000453847 ABCA6Q8N139 1617 aa-0.48□□□□□ -2.49
HMGN3P1-201ENST00000453847 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
HMGN3P1-201ENST00000453847 CCDC180Q9P1Z9 1646 aa-0.49□□□□□ -2.49
HMGN3P1-201ENST00000453847 SPG11Q96JI7 2443 aa-0.49□□□□□ -2.49
HMGN3P1-201ENST00000453847 RPS27P42677 84 aaKnown RBP-0.49□□□□□ -2.49
HMGN3P1-201ENST00000453847 RPS27LQ71UM5 84 aaKnown RBP-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms