RNA–Protein interactions for RNA: ENST00000453216.1

TRAM2-AS1-201, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 664 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-201ENST00000453216 S100A2P29034 98 aa13.94□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 Q6JHZ5 121 aa13.94□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 FSIP2Q5CZC0 6907 aa13.93□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 CLEC2BQ92478 149 aa13.91□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 CRCT1Q9UGL9 99 aa13.9□□□□□ -0.18
TRAM2-AS1-201ENST00000453216 TRBV7-7A0A0K0K1E9 115 aa13.88□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 OCIAD2Q56VL3 154 aa13.88□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 IGFL1Q6UW32 110 aa13.88□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 COX6B2Q6YFQ2 88 aa13.86□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.85□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 C12orf57Q99622 126 aa13.84□□□□□ -0.19
TRAM2-AS1-201ENST00000453216 M0R2T5 61 aa13.83□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 LORP23490 312 aaPredicted RBP13.83□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 KRTAP10-6P60371 365 aaPredicted RBP13.83□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 BVES-AS1Q5T3Y7 98 aa13.83□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 PPDPFLQ8WWR9 84 aa13.82□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 HIST1H4GQ99525 98 aa13.82□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 SNHG12Q9BXW3 62 aa13.8□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 S100A6P06703 90 aa13.78□□□□□ -0.2
TRAM2-AS1-201ENST00000453216 OBSCN-AS1Q96MR7 158 aa13.77□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 FLGP20930 4061 aaPredicted RBP13.75□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 SCGB1D1O95968 90 aa13.75□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 H3BUT2 72 aa13.73□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 COX8AP10176 69 aa13.73□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 LST1O00453 97 aa13.72□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 ATP11AUNQ6ZP68 121 aa13.72□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 Q75L30 129 aa13.72□□□□□ -0.21
TRAM2-AS1-201ENST00000453216 DLEU1O43261 78 aa13.67□□□□□ -0.22
TRAM2-AS1-201ENST00000453216 SNCGO76070 127 aa13.66□□□□□ -0.22
TRAM2-AS1-201ENST00000453216 CFC1P0CG37 223 aa13.66□□□□□ -0.22
TRAM2-AS1-201ENST00000453216 RAB37Q96AX2 223 aa13.66□□□□□ -0.22
TRAM2-AS1-201ENST00000453216 SS18L2Q9UHA2 77 aa13.65□□□□□ -0.22
TRAM2-AS1-201ENST00000453216 S100A1P23297 94 aa13.63□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 Q6Q795 121 aa13.63□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 Q96NJ1 140 aa13.63□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 H0YGX0 51 aa13.62□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 C14orf144Q96I85 54 aa13.6□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 NDUFV3P56181 108 aaKnown RBP13.59□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 TEN1Q86WV5 123 aa13.59□□□□□ -0.23
TRAM2-AS1-201ENST00000453216 A0A0B4J2C4 111 aa13.58□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 FAM218AQ96MZ4 157 aa13.58□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 HIGD1BQ9P298 99 aa13.58□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 A0A087WSZ3 146 aa13.53□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 SPATA45Q537H7 98 aa13.53□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 C20orf166-AS1Q96NR2 134 aa13.53□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 PAM16Q9Y3D7 125 aa13.53□□□□□ -0.24
TRAM2-AS1-201ENST00000453216 H3BMG7 143 aa13.51□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 GHRHP01286 108 aa13.51□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 A8MUU9 505 aa13.5□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 C2orf91Q6ZV80 131 aa13.5□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 A0A1B0GX51 115 aa13.49□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 FABP2P12104 132 aa13.48□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 PRO1854Q9UHT4 67 aa13.47□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 CEND1Q8N111 149 aa13.46□□□□□ -0.25
TRAM2-AS1-201ENST00000453216 TMEM238LA0A1B0GVL6 79 aa13.44□□□□□ -0.26
TRAM2-AS1-201ENST00000453216 A6NJY4 79 aa13.44□□□□□ -0.26
TRAM2-AS1-201ENST00000453216 DSCR10P59022 87 aa13.42□□□□□ -0.26
TRAM2-AS1-201ENST00000453216 A0A1W2PNM2 257 aa13.4□□□□□ -0.26
TRAM2-AS1-201ENST00000453216 SIGMAR1Q99720 223 aa13.4□□□□□ -0.26
TRAM2-AS1-201ENST00000453216 TRBV20-1A0A075B6N2 111 aa13.39□□□□□ -0.27
TRAM2-AS1-201ENST00000453216 TRIAP1O43715 76 aa13.38□□□□□ -0.27
TRAM2-AS1-201ENST00000453216 FXYD2P54710 66 aa13.37□□□□□ -0.27
TRAM2-AS1-201ENST00000453216 ANKRD29Q8N6D5 301 aa13.33□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 DNAL4O96015 105 aa13.32□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 LINC00313P59037 77 aa13.32□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 TRBV7-4A0A0J9YYF1 115 aa13.31□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 IGKV4-1P06312 121 aa13.31□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 ORMDL1Q9P0S3 153 aa13.3□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 A0A1B0GV72 72 aa13.29□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 H3BQ85 93 aa13.28□□□□□ -0.28
TRAM2-AS1-201ENST00000453216 PSMB2P49721 201 aa13.26□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 KRTAP9-8Q9BYQ0 159 aa13.26□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 KRTAP16-1A8MUX0 517 aa13.25□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 TMEM256-PLSCR3K7ERE1 68 aa13.23□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 HSD52Q0P140 79 aa13.22□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 K7ERJ3 54 aa13.21□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 DEFB116Q30KQ4 102 aa13.21□□□□□ -0.29
TRAM2-AS1-201ENST00000453216 FAM236DA0A1B0GTK5 79 aa13.2□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 CCKP06307 115 aa13.2□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 COX6CP09669 75 aa13.2□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 FAM236CP0DP71 79 aa13.2□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 TRACP01848 142 aa13.19□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 LINC00472Q9H8W2 130 aa13.19□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 IGHV6-1A0A0B4J1U7 121 aa13.15□□□□□ -0.3
TRAM2-AS1-201ENST00000453216 UBE2V1Q13404 147 aa13.14□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 RBM12B-AS1Q9P1G2 102 aa13.13□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 PYY3Q5JQD4 70 aa13.12□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 USH2AO75445 5202 aa13.11□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 HRES1P13985 223 aa13.1□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 MPLKIPQ8TAP9 179 aa13.1□□□□□ -0.31
TRAM2-AS1-201ENST00000453216 VPS25Q9BRG1 176 aa13.08□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 C8orf87E5RJ46 101 aa13.05□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 MT2AP02795 61 aa13.05□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 A0A1B0GVX0 72 aa13.04□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 SSPOA2VEC9 5147 aa13.04□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 RBM3P98179 157 aaKnown RBP13.03□□□□□ -0.32
TRAM2-AS1-201ENST00000453216 SCGB1C2P0DMR2 95 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms